RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 Q6ZT83 130 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 PGAM4Q8N0Y7 254 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 FITM2Q8N6M3 262 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 ELOA3Q8NG57 546 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 GPR32P1Q8NGA4 272 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 BCAS4Q8TDM0 211 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 MUCL1Q96DR8 90 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 C1orf159Q96HA4 380 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 KCTD14Q9BQ13 255 aaPredicted RBP13.11□□□□□ -0.31
USB1-203ENST00000539737 PSD2Q9BQI7 771 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 RSPO3Q9BXY4 272 aaPredicted RBP13.11□□□□□ -0.31
USB1-203ENST00000539737 OR11A1Q9GZK7 315 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 TMEM181Q9P2C4 612 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 CDC42EP3Q9UKI2 254 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 USP22Q9UPT9 525 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 TRAPPC4Q9Y296 219 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 TENM1Q9UKZ4 2725 aa13.11□□□□□ -0.31
USB1-203ENST00000539737 A0A1B0GWA3 101 aa13.1□□□□□ -0.31
USB1-203ENST00000539737 ZNF724A8MTY0 619 aa13.1□□□□□ -0.31
USB1-203ENST00000539737 TMEM229AB2RXF0 380 aa13.1□□□□□ -0.31
USB1-203ENST00000539737 M0R3H8 397 aa13.1□□□□□ -0.31
USB1-203ENST00000539737 SMAD9O15198 467 aaKnown RBP13.1□□□□□ -0.31
USB1-203ENST00000539737 KDELR2P33947 212 aa13.1□□□□□ -0.31
USB1-203ENST00000539737 OR3A2P47893 321 aa13.1□□□□□ -0.31
USB1-203ENST00000539737 GSK3BP49841 420 aa13.1□□□□□ -0.31
USB1-203ENST00000539737 CRYBA2P53672 197 aa13.1□□□□□ -0.31
USB1-203ENST00000539737 SLC35A1P78382 337 aa13.1□□□□□ -0.31
USB1-203ENST00000539737 MXRA7P84157 204 aa13.1□□□□□ -0.31
USB1-203ENST00000539737 ALG10BQ5I7T1 473 aa13.1□□□□□ -0.31
USB1-203ENST00000539737 C9orf135Q5VTT2 229 aa13.1□□□□□ -0.31
USB1-203ENST00000539737 ULK3Q6PHR2 472 aa13.1□□□□□ -0.31
USB1-203ENST00000539737 C5orf46Q6UWT4 87 aa13.1□□□□□ -0.31
USB1-203ENST00000539737 UBE2J2Q8N2K1 259 aa13.1□□□□□ -0.31
USB1-203ENST00000539737 PIGXQ8TBF5 258 aa13.1□□□□□ -0.31
USB1-203ENST00000539737 STK35Q8TDR2 534 aa13.1□□□□□ -0.31
USB1-203ENST00000539737 LZICQ8WZA0 190 aa13.1□□□□□ -0.31
USB1-203ENST00000539737 ARL5BQ96KC2 179 aa13.1□□□□□ -0.31
USB1-203ENST00000539737 NAA11Q9BSU3 229 aaPredicted RBP13.1□□□□□ -0.31
USB1-203ENST00000539737 ADA2Q9NZK5 511 aa13.1□□□□□ -0.31
USB1-203ENST00000539737 NOSIPQ9Y314 301 aaKnown RBP13.1□□□□□ -0.31
USB1-203ENST00000539737 A0A0B4J2E0 115 aa13.09□□□□□ -0.31
USB1-203ENST00000539737 A0A1B0GX12 115 aa13.09□□□□□ -0.31
USB1-203ENST00000539737 CXCR6O00574 342 aa13.09□□□□□ -0.31
USB1-203ENST00000539737 WIPF1O43516 503 aa13.09□□□□□ -0.31
USB1-203ENST00000539737 EIF1BO60739 113 aaKnown RBP13.09□□□□□ -0.31
USB1-203ENST00000539737 TTKP33981 857 aa13.09□□□□□ -0.31
USB1-203ENST00000539737 NTF4P34130 210 aa13.09□□□□□ -0.31
USB1-203ENST00000539737 OR2B6P58173 313 aa13.09□□□□□ -0.31
USB1-203ENST00000539737 VLDLRP98155 873 aa13.09□□□□□ -0.31
USB1-203ENST00000539737 PDK3Q15120 406 aa13.09□□□□□ -0.31
USB1-203ENST00000539737 OR1Q1Q15612 314 aa13.09□□□□□ -0.31
USB1-203ENST00000539737 CYBRD1Q53TN4 286 aa13.09□□□□□ -0.31
USB1-203ENST00000539737 ABLIM2Q6H8Q1 611 aa13.09□□□□□ -0.31
USB1-203ENST00000539737 ZNF613Q6PF04 617 aa13.09□□□□□ -0.31
USB1-203ENST00000539737 OR6T1Q8NGN1 323 aa13.09□□□□□ -0.31
USB1-203ENST00000539737 VANGL1Q8TAA9 524 aaPredicted RBP13.09□□□□□ -0.31
USB1-203ENST00000539737 SLC47A1Q96FL8 570 aa13.09□□□□□ -0.31
USB1-203ENST00000539737 MCHR1Q99705 422 aa13.09□□□□□ -0.31
USB1-203ENST00000539737 SOX7Q9BT81 388 aa13.09□□□□□ -0.31
USB1-203ENST00000539737 TAPBPLQ9BX59 468 aa13.09□□□□□ -0.31
USB1-203ENST00000539737 SHARPINQ9H0F6 387 aa13.09□□□□□ -0.31
USB1-203ENST00000539737 BARX1Q9HBU1 254 aaPredicted RBP13.09□□□□□ -0.31
USB1-203ENST00000539737 ADPRHL2Q9NX46 363 aa13.09□□□□□ -0.31
USB1-203ENST00000539737 POU2F3Q9UKI9 436 aa13.09□□□□□ -0.31
USB1-203ENST00000539737 HEATR1Q9H583 2144 aaKnown RBP13.09□□□□□ -0.31
USB1-203ENST00000539737 ARFGEF3Q5TH69 2177 aa13.08□□□□□ -0.31
USB1-203ENST00000539737 CIB4A0PJX0 185 aa13.08□□□□□ -0.32
USB1-203ENST00000539737 ZC3H12DA2A288 527 aaKnown RBP13.08□□□□□ -0.32
USB1-203ENST00000539737 M0R1B8 84 aa13.08□□□□□ -0.32
USB1-203ENST00000539737 AHSA1O95433 338 aa13.08□□□□□ -0.32
USB1-203ENST00000539737 GPIP06744 558 aa13.08□□□□□ -0.32
USB1-203ENST00000539737 CALB2P22676 271 aa13.08□□□□□ -0.32
USB1-203ENST00000539737 SLC25A3Q00325 362 aa13.08□□□□□ -0.32
USB1-203ENST00000539737 LOXL1Q08397 574 aaPredicted RBP13.08□□□□□ -0.32
USB1-203ENST00000539737 GGTLC2Q14390 218 aa13.08□□□□□ -0.32
USB1-203ENST00000539737 SPATS1Q496A3 300 aa13.08□□□□□ -0.32
USB1-203ENST00000539737 SAMD4BQ5PRF9 694 aaKnown RBP13.08□□□□□ -0.32
USB1-203ENST00000539737 C1orf140Q5VVS0 124 aa13.08□□□□□ -0.32
USB1-203ENST00000539737 AGAP6Q5VW22 663 aa13.08□□□□□ -0.32
USB1-203ENST00000539737 SLC22A25Q6T423 547 aa13.08□□□□□ -0.32
USB1-203ENST00000539737 P2RY8Q86VZ1 359 aa13.08□□□□□ -0.32
USB1-203ENST00000539737 CARM1Q86X55 608 aa13.08□□□□□ -0.32
USB1-203ENST00000539737 ZNF433Q8N7K0 673 aaPredicted RBP13.08□□□□□ -0.32
USB1-203ENST00000539737 C10orf105Q8TEF2 133 aa13.08□□□□□ -0.32
USB1-203ENST00000539737 FAM168AQ92567 244 aa13.08□□□□□ -0.32
USB1-203ENST00000539737 POLR2J2Q9GZM3 115 aaKnown RBP13.08□□□□□ -0.32
USB1-203ENST00000539737 PCDHAC1Q9H158 963 aa13.08□□□□□ -0.32
USB1-203ENST00000539737 POLR2J3Q9H1A7 115 aaKnown RBP13.08□□□□□ -0.32
USB1-203ENST00000539737 PARPBPQ9NWS1 579 aa13.08□□□□□ -0.32
USB1-203ENST00000539737 LIPT2A6NK58 231 aa13.07□□□□□ -0.32
USB1-203ENST00000539737 CHP2O43745 196 aa13.07□□□□□ -0.32
USB1-203ENST00000539737 LMX1BO60663 402 aa13.07□□□□□ -0.32
USB1-203ENST00000539737 NPIPB7O75200 414 aa13.07□□□□□ -0.32
USB1-203ENST00000539737 MRPL33O75394 65 aaKnown RBP13.07□□□□□ -0.32
USB1-203ENST00000539737 GMNNO75496 209 aa13.07□□□□□ -0.32
USB1-203ENST00000539737 IMPDH2P12268 514 aa13.07□□□□□ -0.32
USB1-203ENST00000539737 GGT1P19440 569 aa13.07□□□□□ -0.32
USB1-203ENST00000539737 GTF2E2P29084 291 aaKnown RBP13.07□□□□□ -0.32
USB1-203ENST00000539737 FABP6P51161 128 aa13.07□□□□□ -0.32
USB1-203ENST00000539737 BNIP2Q12982 314 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms