RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 RCBTB2O95199 551 aa20.94■□□□□ 0.94
TMEM260-202ENST00000538838 POU3F1Q03052 451 aaPredicted RBP20.94■□□□□ 0.94
TMEM260-202ENST00000538838 ZP4Q12836 540 aa20.94■□□□□ 0.94
TMEM260-202ENST00000538838 SLC17A1Q14916 467 aa20.94■□□□□ 0.94
TMEM260-202ENST00000538838 IGFBP7Q16270 282 aa20.94■□□□□ 0.94
TMEM260-202ENST00000538838 CLEC12AQ5QGZ9 265 aa20.94■□□□□ 0.94
TMEM260-202ENST00000538838 SEM1Q6ZVN7 128 aa20.94■□□□□ 0.94
TMEM260-202ENST00000538838 SLC43A2Q8N370 569 aa20.94■□□□□ 0.94
TMEM260-202ENST00000538838 PACRGLQ8N7B6 248 aa20.94■□□□□ 0.94
TMEM260-202ENST00000538838 WNT2BQ93097 391 aa20.94■□□□□ 0.94
TMEM260-202ENST00000538838 OXGR1Q96P68 337 aa20.94■□□□□ 0.94
TMEM260-202ENST00000538838 RNF122Q9H9V4 155 aa20.94■□□□□ 0.94
TMEM260-202ENST00000538838 FANCFQ9NPI8 374 aa20.94■□□□□ 0.94
TMEM260-202ENST00000538838 IL20Q9NYY1 176 aa20.94■□□□□ 0.94
TMEM260-202ENST00000538838 ING1Q9UK53 422 aaPredicted RBP20.94■□□□□ 0.94
TMEM260-202ENST00000538838 CLEC4AQ9UMR7 237 aa20.94■□□□□ 0.94
TMEM260-202ENST00000538838 ORC6Q9Y5N6 252 aa20.94■□□□□ 0.94
TMEM260-202ENST00000538838 NBASA2RRP1 2371 aa20.93■□□□□ 0.94
TMEM260-202ENST00000538838 VAMP5O95183 116 aa20.93■□□□□ 0.94
TMEM260-202ENST00000538838 POU1F1P28069 291 aa20.93■□□□□ 0.94
TMEM260-202ENST00000538838 RPL4P36578 427 aaKnown RBP20.93■□□□□ 0.94
TMEM260-202ENST00000538838 RFX4Q33E94 735 aa20.93■□□□□ 0.94
TMEM260-202ENST00000538838 ZIK1Q3SY52 487 aaPredicted RBP20.93■□□□□ 0.94
TMEM260-202ENST00000538838 RPL13AP3Q6NVV1 102 aa20.93■□□□□ 0.94
TMEM260-202ENST00000538838 B3GNT6Q6ZMB0 384 aa20.93■□□□□ 0.94
TMEM260-202ENST00000538838 OR9K2Q8NGE7 335 aa20.93■□□□□ 0.94
TMEM260-202ENST00000538838 RIBC2Q9H4K1 309 aa20.93■□□□□ 0.94
TMEM260-202ENST00000538838 INIPQ9NRY2 104 aa20.93■□□□□ 0.94
TMEM260-202ENST00000538838 TRGV8A0A0C4DH27 118 aa20.93■□□□□ 0.94
TMEM260-202ENST00000538838 HOXD4P09016 255 aaPredicted RBP20.93■□□□□ 0.94
TMEM260-202ENST00000538838 RAD23AP54725 363 aa20.93■□□□□ 0.94
TMEM260-202ENST00000538838 TAF11Q15544 211 aa20.93■□□□□ 0.94
TMEM260-202ENST00000538838 PXKQ7Z7A4 578 aa20.93■□□□□ 0.94
TMEM260-202ENST00000538838 UEVLDQ8IX04 471 aa20.93■□□□□ 0.94
TMEM260-202ENST00000538838 ANKK1Q8NFD2 765 aa20.93■□□□□ 0.94
TMEM260-202ENST00000538838 OR52L1Q8NGH7 329 aa20.93■□□□□ 0.94
TMEM260-202ENST00000538838 TEX47Q8TBZ9 253 aa20.93■□□□□ 0.94
TMEM260-202ENST00000538838 KATNB1Q9BVA0 655 aa20.93■□□□□ 0.94
TMEM260-202ENST00000538838 C8orf4Q9NR00 106 aa20.93■□□□□ 0.94
TMEM260-202ENST00000538838 KLHL9Q9P2J3 617 aa20.93■□□□□ 0.94
TMEM260-202ENST00000538838 MBD3L4A6NDZ8 208 aaPredicted RBP20.92■□□□□ 0.94
TMEM260-202ENST00000538838 MBD3L3A6NE82 208 aaPredicted RBP20.92■□□□□ 0.94
TMEM260-202ENST00000538838 MBD3L5A6NJ08 208 aaPredicted RBP20.92■□□□□ 0.94
TMEM260-202ENST00000538838 TRAF3IP2O43734 574 aaPredicted RBP20.92■□□□□ 0.94
TMEM260-202ENST00000538838 PPP1R3DO95685 299 aa20.92■□□□□ 0.94
TMEM260-202ENST00000538838 SNAP29O95721 258 aa20.92■□□□□ 0.94
TMEM260-202ENST00000538838 ZNF43P17038 809 aa20.92■□□□□ 0.94
TMEM260-202ENST00000538838 EPHA2P29317 976 aa20.92■□□□□ 0.94
TMEM260-202ENST00000538838 SLC6A6P31641 620 aa20.92■□□□□ 0.94
TMEM260-202ENST00000538838 POLR2IP36954 125 aaKnown RBP20.92■□□□□ 0.94
TMEM260-202ENST00000538838 SLC16A1P53985 500 aa20.92■□□□□ 0.94
TMEM260-202ENST00000538838 CTXN1P60606 82 aa20.92■□□□□ 0.94
TMEM260-202ENST00000538838 RNPS1Q15287 305 aaKnown RBP20.92■□□□□ 0.94
TMEM260-202ENST00000538838 POU4F3Q15319 338 aa20.92■□□□□ 0.94
TMEM260-202ENST00000538838 SNCBQ16143 134 aa20.92■□□□□ 0.94
TMEM260-202ENST00000538838 EEF1A1P5Q5VTE0 462 aa20.92■□□□□ 0.94
TMEM260-202ENST00000538838 MCEMP1Q8IX19 187 aa20.92■□□□□ 0.94
TMEM260-202ENST00000538838 GCNT2Q8N0V5 402 aa20.92■□□□□ 0.94
TMEM260-202ENST00000538838 IQCF1Q8N6M8 205 aa20.92■□□□□ 0.94
TMEM260-202ENST00000538838 GALNT11Q8NCW6 608 aa20.92■□□□□ 0.94
TMEM260-202ENST00000538838 MBD3L2Q8NHZ7 208 aaPredicted RBP20.92■□□□□ 0.94
TMEM260-202ENST00000538838 ZNF775Q96BV0 537 aaPredicted RBP20.92■□□□□ 0.94
TMEM260-202ENST00000538838 GPX7Q96SL4 187 aaPredicted RBP20.92■□□□□ 0.94
TMEM260-202ENST00000538838 SF3B5Q9BWJ5 86 aaKnown RBP20.92■□□□□ 0.94
TMEM260-202ENST00000538838 TSSK6Q9BXA6 273 aa20.92■□□□□ 0.94
TMEM260-202ENST00000538838 GABARAPL3Q9BY60 117 aa20.92■□□□□ 0.94
TMEM260-202ENST00000538838 NDEL1Q9GZM8 345 aa20.92■□□□□ 0.94
TMEM260-202ENST00000538838 VCXQ9H320 206 aa20.92■□□□□ 0.94
TMEM260-202ENST00000538838 TOR3AQ9H497 397 aa20.92■□□□□ 0.94
TMEM260-202ENST00000538838 ADAM18Q9Y3Q7 739 aa20.92■□□□□ 0.94
TMEM260-202ENST00000538838 NOX1Q9Y5S8 564 aa20.92■□□□□ 0.94
TMEM260-202ENST00000538838 FLVCR1Q9Y5Y0 555 aa20.92■□□□□ 0.94
TMEM260-202ENST00000538838 LOC102725191A0A1B0GVB3 256 aa20.91■□□□□ 0.94
TMEM260-202ENST00000538838 DLGAP1O14490 977 aa20.91■□□□□ 0.94
TMEM260-202ENST00000538838 CA7P43166 264 aa20.91■□□□□ 0.94
TMEM260-202ENST00000538838 UQCRFS1P47985 274 aa20.91■□□□□ 0.94
TMEM260-202ENST00000538838 CRISP1P54107 249 aa20.91■□□□□ 0.94
TMEM260-202ENST00000538838 CASP6P55212 293 aa20.91■□□□□ 0.94
TMEM260-202ENST00000538838 ERVK-25P63136 954 aa20.91■□□□□ 0.94
TMEM260-202ENST00000538838 TOP3AQ13472 1001 aaPredicted RBP20.91■□□□□ 0.94
TMEM260-202ENST00000538838 C1DQ13901 141 aaKnown RBP20.91■□□□□ 0.94
TMEM260-202ENST00000538838 MELKQ14680 651 aa20.91■□□□□ 0.94
TMEM260-202ENST00000538838 NCCRP1Q6ZVX7 275 aaPredicted RBP20.91■□□□□ 0.94
TMEM260-202ENST00000538838 CREB3L2Q70SY1 520 aa20.91■□□□□ 0.94
TMEM260-202ENST00000538838 MBOAT4Q96T53 435 aa20.91■□□□□ 0.94
TMEM260-202ENST00000538838 TTYH2Q9BSA4 534 aa20.91■□□□□ 0.94
TMEM260-202ENST00000538838 IFT27Q9BW83 186 aa20.91■□□□□ 0.94
TMEM260-202ENST00000538838 POLDIP3Q9BY77 421 aaKnown RBP20.91■□□□□ 0.94
TMEM260-202ENST00000538838 MED29Q9NX70 200 aa20.91■□□□□ 0.94
TMEM260-202ENST00000538838 SMPD3Q9NY59 655 aaPredicted RBP20.91■□□□□ 0.94
TMEM260-202ENST00000538838 IGKV3D-15A0A087WSY6 115 aa20.9■□□□□ 0.94
TMEM260-202ENST00000538838 TOXO94900 526 aa20.9■□□□□ 0.94
TMEM260-202ENST00000538838 CDH2P19022 906 aaPredicted RBP20.9■□□□□ 0.94
TMEM260-202ENST00000538838 GNLYP22749 145 aa20.9■□□□□ 0.94
TMEM260-202ENST00000538838 ESRRGP62508 458 aa20.9■□□□□ 0.94
TMEM260-202ENST00000538838 NHLRC1Q6VVB1 395 aa20.9■□□□□ 0.94
TMEM260-202ENST00000538838 TUSC5Q8IXB3 177 aa20.9■□□□□ 0.94
TMEM260-202ENST00000538838 MARVELD2Q8N4S9 558 aa20.9■□□□□ 0.94
TMEM260-202ENST00000538838 OR4Q3Q8NH05 313 aa20.9■□□□□ 0.94
TMEM260-202ENST00000538838 ZNF385AQ96PM9 386 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms