RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 RELTQ969Z4 430 aa22.64■■□□□ 1.22
RAB40C-204ENST00000538492 CCNL2Q96S94 520 aaPredicted RBP22.64■■□□□ 1.22
RAB40C-204ENST00000538492 TSPAN10Q9H1Z9 355 aaPredicted RBP22.64■■□□□ 1.22
RAB40C-204ENST00000538492 PCNX3Q9H6A9 2034 aa22.64■■□□□ 1.21
RAB40C-204ENST00000538492 ZNF879B4DU55 563 aa22.64■■□□□ 1.21
RAB40C-204ENST00000538492 IL12BP29460 328 aa22.64■■□□□ 1.21
RAB40C-204ENST00000538492 UQCRC1P31930 480 aa22.64■■□□□ 1.21
RAB40C-204ENST00000538492 NR0B1P51843 470 aaKnown RBP22.64■■□□□ 1.21
RAB40C-204ENST00000538492 NXPH1P58417 271 aa22.64■■□□□ 1.21
RAB40C-204ENST00000538492 RRAS2P62070 204 aaPredicted RBP22.64■■□□□ 1.21
RAB40C-204ENST00000538492 CFHR1Q03591 330 aa22.64■■□□□ 1.21
RAB40C-204ENST00000538492 NSDHLQ15738 373 aa22.64■■□□□ 1.21
RAB40C-204ENST00000538492 Q5BKY6 102 aa22.64■■□□□ 1.21
RAB40C-204ENST00000538492 HES5Q5TA89 166 aa22.64■■□□□ 1.21
RAB40C-204ENST00000538492 TCTE3Q8IZS6 198 aa22.64■■□□□ 1.21
RAB40C-204ENST00000538492 RGP1Q92546 391 aaPredicted RBP22.64■■□□□ 1.21
RAB40C-204ENST00000538492 YIPF5Q969M3 257 aa22.64■■□□□ 1.21
RAB40C-204ENST00000538492 TSPAN32Q96QS1 320 aa22.64■■□□□ 1.21
RAB40C-204ENST00000538492 OR1F2PQ96R84 312 aa22.64■■□□□ 1.21
RAB40C-204ENST00000538492 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.64■■□□□ 1.212e-7■■■■□ 21.9
RAB40C-204ENST00000538492 ZCCHC4Q9H5U6 513 aa22.64■■□□□ 1.21
RAB40C-204ENST00000538492 FAM47E-STBD1D6RA91 191 aa22.63■■□□□ 1.21
RAB40C-204ENST00000538492 WISP1O95388 367 aa22.63■■□□□ 1.21
RAB40C-204ENST00000538492 NUDT14O95848 222 aa22.63■■□□□ 1.21
RAB40C-204ENST00000538492 RPS27P42677 84 aaKnown RBP22.63■■□□□ 1.21
RAB40C-204ENST00000538492 HSF2Q03933 536 aa22.63■■□□□ 1.21
RAB40C-204ENST00000538492 MESTQ5EB52 335 aa22.63■■□□□ 1.21
RAB40C-204ENST00000538492 BCL2L15Q5TBC7 163 aa22.63■■□□□ 1.21
RAB40C-204ENST00000538492 PRSS45Q7RTY3 260 aa22.63■■□□□ 1.21
RAB40C-204ENST00000538492 C9orf40Q8IXQ3 194 aa22.63■■□□□ 1.21
RAB40C-204ENST00000538492 EXD3Q8N9H8 876 aa22.63■■□□□ 1.21
RAB40C-204ENST00000538492 RNF166Q96A37 237 aaPredicted RBP22.63■■□□□ 1.21
RAB40C-204ENST00000538492 CHRNA10Q9GZZ6 450 aa22.63■■□□□ 1.21
RAB40C-204ENST00000538492 MRTO4Q9UKD2 239 aaKnown RBP22.63■■□□□ 1.21
RAB40C-204ENST00000538492 ZNF281Q9Y2X9 895 aa22.63■■□□□ 1.21
RAB40C-204ENST00000538492 UBL3O95164 117 aa22.63■■□□□ 1.21
RAB40C-204ENST00000538492 ADRB1P08588 477 aa22.63■■□□□ 1.21
RAB40C-204ENST00000538492 FOLR1P15328 257 aa22.63■■□□□ 1.21
RAB40C-204ENST00000538492 SDHBP21912 280 aa22.63■■□□□ 1.21
RAB40C-204ENST00000538492 EFR3AQ14156 821 aa22.63■■□□□ 1.21
RAB40C-204ENST00000538492 NDUFA5Q16718 116 aa22.63■■□□□ 1.21
RAB40C-204ENST00000538492 UNQ9370/PRO34162Q6UXP9 181 aa22.63■■□□□ 1.21
RAB40C-204ENST00000538492 TOMM5Q8N4H5 51 aa22.63■■□□□ 1.21
RAB40C-204ENST00000538492 ADAD1Q96M93 576 aaKnown RBP22.63■■□□□ 1.21
RAB40C-204ENST00000538492 GFI1Q99684 422 aa22.63■■□□□ 1.21
RAB40C-204ENST00000538492 RAB33BQ9H082 229 aa22.63■■□□□ 1.21
RAB40C-204ENST00000538492 NUDT15Q9NV35 164 aa22.63■■□□□ 1.21
RAB40C-204ENST00000538492 CABIN1Q9Y6J0 2220 aa22.63■■□□□ 1.21
RAB40C-204ENST00000538492 CACNA1CQ13936 2221 aa22.63■■□□□ 1.21
RAB40C-204ENST00000538492 SMLR1H3BR10 107 aa22.62■■□□□ 1.21
RAB40C-204ENST00000538492 GPRIN2O60269 458 aa22.62■■□□□ 1.21
RAB40C-204ENST00000538492 EVI2BP34910 448 aa22.62■■□□□ 1.21
RAB40C-204ENST00000538492 ELAVL1Q15717 326 aaKnown RBP22.62■■□□□ 1.21
RAB40C-204ENST00000538492 ZNF684Q5T5D7 378 aa22.62■■□□□ 1.21
RAB40C-204ENST00000538492 C1QL3Q5VWW1 255 aa22.62■■□□□ 1.21
RAB40C-204ENST00000538492 SLC16A9Q7RTY1 509 aa22.62■■□□□ 1.21
RAB40C-204ENST00000538492 BMPERQ8N8U9 685 aa22.62■■□□□ 1.21
RAB40C-204ENST00000538492 SPATA2Q9UM82 520 aa22.62■■□□□ 1.21
RAB40C-204ENST00000538492 IGHV1OR21-1A0A087WYE8 117 aa22.62■■□□□ 1.21
RAB40C-204ENST00000538492 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.62■■□□□ 1.21
RAB40C-204ENST00000538492 GPANK1O95872 356 aa22.62■■□□□ 1.21
RAB40C-204ENST00000538492 CD1AP06126 327 aa22.62■■□□□ 1.21
RAB40C-204ENST00000538492 SLC25A1P53007 311 aa22.62■■□□□ 1.21
RAB40C-204ENST00000538492 EBPQ15125 230 aaKnown RBP22.62■■□□□ 1.21
RAB40C-204ENST00000538492 SLC35F3Q8IY50 421 aa22.62■■□□□ 1.21
RAB40C-204ENST00000538492 TRIM3O75382 744 aaPredicted RBP22.61■■□□□ 1.21
RAB40C-204ENST00000538492 IGF2P01344 180 aa22.61■■□□□ 1.21
RAB40C-204ENST00000538492 HIST1H2ABP04908 130 aa22.61■■□□□ 1.21
RAB40C-204ENST00000538492 FOXL2P58012 376 aa22.61■■□□□ 1.21
RAB40C-204ENST00000538492 SMAD4Q13485 552 aaKnown RBP22.61■■□□□ 1.21
RAB40C-204ENST00000538492 HLA-DQA1Q5Y7H0 255 aa22.61■■□□□ 1.21
RAB40C-204ENST00000538492 HIST3H2AQ7L7L0 130 aa22.61■■□□□ 1.21
RAB40C-204ENST00000538492 SIAH3Q8IW03 269 aa22.61■■□□□ 1.21
RAB40C-204ENST00000538492 OR6V1Q8N148 313 aa22.61■■□□□ 1.21
RAB40C-204ENST00000538492 CEP76Q8TAP6 659 aa22.61■■□□□ 1.21
RAB40C-204ENST00000538492 AKAP1Q92667 903 aaKnown RBP eCLIP22.61■■□□□ 1.21
RAB40C-204ENST00000538492 HIST1H2ACQ93077 130 aa22.61■■□□□ 1.21
RAB40C-204ENST00000538492 LAT2Q9GZY6 243 aa22.61■■□□□ 1.21
RAB40C-204ENST00000538492 TTYH1Q9H313 450 aaPredicted RBP22.61■■□□□ 1.21
RAB40C-204ENST00000538492 ANKRD10Q9NXR5 420 aa22.61■■□□□ 1.21
RAB40C-204ENST00000538492 ING3Q9NXR8 418 aa22.61■■□□□ 1.21
RAB40C-204ENST00000538492 MRM2Q9UI43 246 aaKnown RBP22.61■■□□□ 1.21
RAB40C-204ENST00000538492 SLC6A5Q9Y345 797 aa22.61■■□□□ 1.21
RAB40C-204ENST00000538492 A0A0A6YYJ9 748 aa22.61■■□□□ 1.21
RAB40C-204ENST00000538492 PIAS2O75928 621 aa22.61■■□□□ 1.21
RAB40C-204ENST00000538492 APEHP13798 732 aaKnown RBP22.61■■□□□ 1.21
RAB40C-204ENST00000538492 FBLP22087 321 aaKnown RBP22.61■■□□□ 1.21
RAB40C-204ENST00000538492 MMP15P51511 669 aa22.61■■□□□ 1.21
RAB40C-204ENST00000538492 EPHA4P54764 986 aa22.61■■□□□ 1.21
RAB40C-204ENST00000538492 CLDN12P56749 244 aa22.61■■□□□ 1.21
RAB40C-204ENST00000538492 LIPNQ5VXI9 398 aa22.61■■□□□ 1.21
RAB40C-204ENST00000538492 CADM4Q8NFZ8 388 aa22.61■■□□□ 1.21
RAB40C-204ENST00000538492 ADAM19Q9H013 955 aa22.61■■□□□ 1.21
RAB40C-204ENST00000538492 ZNF304Q9HCX3 659 aa22.61■■□□□ 1.21
RAB40C-204ENST00000538492 A0A1B0GTH9 108 aa22.6■■□□□ 1.21
RAB40C-204ENST00000538492 TCRBV16S1A1N1A0A5B0 115 aa22.6■■□□□ 1.21
RAB40C-204ENST00000538492 NDUFB5O43674 189 aa22.6■■□□□ 1.21
RAB40C-204ENST00000538492 CXCR1P25024 350 aa22.6■■□□□ 1.21
RAB40C-204ENST00000538492 CCDC92Q53HC0 331 aaPredicted RBP22.6■■□□□ 1.21
RAB40C-204ENST00000538492 OTPQ5XKR4 325 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms