RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 EPHX3Q9H6B9 360 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 EGLN3Q9H6Z9 239 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 SEC61A2Q9H9S3 476 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 SLAMF7Q9NQ25 335 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 HINT3Q9NQE9 182 aaKnown RBP6.14□□□□□ -1.43
USP28-207ENST00000538475 PRMT8Q9NR22 394 aaPredicted RBP6.14□□□□□ -1.43
USP28-207ENST00000538475 CMC2Q9NRP2 79 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 TAAR2Q9P1P5 351 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 FLVCR2Q9UPI3 526 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 SLC35A3Q9Y2D2 325 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 Q9Y3F1 56 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 PCDHGA5Q9Y5G8 931 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 TRPV2Q9Y5S1 764 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 WIF1Q9Y5W5 379 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 SIRT4Q9Y6E7 314 aaPredicted RBP6.14□□□□□ -1.43
USP28-207ENST00000538475 ZFP37Q9Y6Q3 630 aaPredicted RBP6.14□□□□□ -1.43
USP28-207ENST00000538475 V9GY05 133 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 BPTFQ12830 3046 aa6.14□□□□□ -1.43
USP28-207ENST00000538475 NUMA1Q14980 2115 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 A0A0A6YYH2 397 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 TEX13DA0A0J9YY54 714 aaPredicted RBP6.13□□□□□ -1.43
USP28-207ENST00000538475 C9orf170A2RU37 121 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 A6NJ64 397 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 PYCARD-AS1I3L0S3 204 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 GOSR2O14653 212 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 TAAR5O14804 337 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 FMO6PO60774 539 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 CD160O95971 181 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 IGSF6O95976 241 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 F10P00742 488 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 IGF2P01344 180 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 IFNA2P01563 188 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 IFNA17P01571 189 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 CRYABP02511 175 aaKnown RBP6.13□□□□□ -1.43
USP28-207ENST00000538475 ALPIP09923 528 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 VSIG10L2P0DP72 767 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 PRG2P13727 222 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 SRMP19623 302 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 ANXA7P20073 488 aaKnown RBP6.13□□□□□ -1.43
USP28-207ENST00000538475 SERPINA4P29622 427 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 BDKRB2P30411 391 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 VIPR1P32241 457 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 CEACAM6P40199 344 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 HTR5AP47898 357 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 SLC6A9P48067 706 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 CAV2P51636 162 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 CAPZA1P52907 286 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 TAS2R60P59551 318 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 SIRPAP78324 504 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 MRPS6P82932 125 aaKnown RBP6.13□□□□□ -1.43
USP28-207ENST00000538475 SORDQ00796 357 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 SRSF5Q13243 272 aaKnown RBP6.13□□□□□ -1.43
USP28-207ENST00000538475 SERTAD2Q14140 314 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 GGTLC2Q14390 218 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 GPNMBQ14956 572 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 INPP5JQ15735 1006 aaPredicted RBP6.13□□□□□ -1.43
USP28-207ENST00000538475 ZNF239Q16600 458 aaKnown RBP6.13□□□□□ -1.43
USP28-207ENST00000538475 EIPR1Q53HC9 387 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 OR2B11Q5JQS5 317 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 RTP2Q5QGT7 225 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 FAM74A1Q5RGS3 127 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 MFSD14CQ5VZR4 134 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 RNF219Q5W0B1 726 aaPredicted RBP6.13□□□□□ -1.43
USP28-207ENST00000538475 RAB12Q6IQ22 244 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 PWWP2BQ6NUJ5 590 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 ZNF613Q6PF04 617 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 C11orf88Q6PI97 169 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 HIST2H3AQ71DI3 136 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 TAS1R1Q7RTX1 841 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 BAP18Q8IXM2 172 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 MUC20Q8N307 709 aaPredicted RBP6.13□□□□□ -1.43
USP28-207ENST00000538475 TMEM229BQ8NBD8 167 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 GPRC5AQ8NFJ5 357 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 OR56A1Q8NGH5 318 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 OR51G2Q8NGK0 314 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 OR5M1Q8NGP8 315 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 OR1S2Q8NGQ3 325 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 OR1J2Q8NGS2 313 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 OR5J2Q8NH18 312 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 RSPRY1Q96DX4 576 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 RAB3CQ96E17 227 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 MYEOVQ96EZ4 313 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 PFDN5Q99471 154 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 TEAD3Q99594 435 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 GPA33Q99795 319 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 VRK1Q99986 396 aaPredicted RBP6.13□□□□□ -1.43
USP28-207ENST00000538475 NRIP2Q9BQI9 281 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 MESP1Q9BRJ9 268 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 SORBS1Q9BX66 1292 aaKnown RBP6.13□□□□□ -1.43
USP28-207ENST00000538475 ZNF471Q9BX82 626 aaPredicted RBP6.13□□□□□ -1.43
USP28-207ENST00000538475 TINAGL1Q9GZM7 467 aaPredicted RBP6.13□□□□□ -1.43
USP28-207ENST00000538475 AP5M1Q9H0R1 490 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 ATG10Q9H0Y0 220 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 UBQLN3Q9H347 655 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 SMDT1Q9H4I9 107 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 ELAC1Q9H777 363 aaKnown RBP6.13□□□□□ -1.43
USP28-207ENST00000538475 TMEM185BQ9H7F4 350 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 AUNIPQ9H7T9 357 aa6.13□□□□□ -1.43
USP28-207ENST00000538475 ISG20L2Q9H9L3 353 aaKnown RBP6.13□□□□□ -1.43
USP28-207ENST00000538475 PELI2Q9HAT8 420 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms