RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 MINDY2Q8NBR6 621 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 C7orf34Q96L11 122 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 PHB2Q99623 299 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 OR2S2Q9NQN1 319 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 HRH3Q9Y5N1 445 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 SLC22A7Q9Y694 548 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 KIAA1217Q5T5P2 1943 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 ZNF891A8MT65 544 aaPredicted RBP4.93□□□□□ -1.62
LRP6-203ENST00000538239 PRKYO43930 277 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 TUSC2O75896 110 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 ALDOBP05062 364 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 LGALS4P56470 323 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 DEFA5Q01523 94 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 RAB40BQ12829 278 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 HES1Q14469 280 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 EDDM3AQ14507 147 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 MOGQ16653 247 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 ESCO2Q56NI9 601 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 ZNF766Q5HY98 468 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 KHDC1LQ5JSQ8 128 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 MTFR2Q6P444 385 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 MRPL41Q8IXM3 137 aaKnown RBP4.93□□□□□ -1.62
LRP6-203ENST00000538239 IER2Q9BTL4 223 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 WWTR1Q9GZV5 400 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 PCED1AQ9H1Q7 454 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 TP63Q9H3D4 680 aaPredicted RBP4.93□□□□□ -1.62
LRP6-203ENST00000538239 PLEKHA3Q9HB20 300 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 ENPP5Q9UJA9 477 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 PPT2Q9UMR5 302 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 CASP8AP2Q9UKL3 1982 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 MYO10Q9HD67 2058 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 BORCS7-ASMTA0A0B4J1R7 106 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 LILRA5A6NI73 299 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 FAM90A27PA6NNH2 459 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 PATE3B3GLJ2 98 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 EIF4E2O60573 245 aaKnown RBP4.93□□□□□ -1.62
LRP6-203ENST00000538239 TSPAN9O75954 239 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 S100A9P06702 114 aaKnown RBP4.93□□□□□ -1.62
LRP6-203ENST00000538239 CD40LGP29965 261 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 PRSS3P35030 304 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 SNTB2Q13425 540 aaKnown RBP4.93□□□□□ -1.62
LRP6-203ENST00000538239 RUNX2Q13950 521 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 CMIPQ8IY22 773 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 OR6V1Q8N148 313 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 C22orf15Q8WYQ4 148 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 MRGPRX3Q96LB0 322 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 CHRNA9Q9UGM1 479 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 COA3Q9Y2R0 106 aaPredicted RBP4.93□□□□□ -1.62
LRP6-203ENST00000538239 SPAARA0A1B0GVQ0 90 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 C5orf67F2Z3F1 127 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 DVL2O14641 736 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 BET1O15155 118 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 TNFSF14O43557 240 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 SSX5O60225 188 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 LIPCP11150 499 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 CD22P20273 847 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 MAKP20794 623 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 HLCSP50747 726 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 ACTBP60709 375 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 GNB2P62879 340 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 ACTG1P63261 375 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 ZNF45Q02386 682 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 ARHGAP11BQ3KRB8 267 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 FAM76BQ5HYJ3 339 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 C16orf52Q8NHV5 167 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 ROBO4Q8WZ75 1007 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 TEX37Q96LM6 180 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 ZNF681Q96N22 645 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 CSF3RQ99062 836 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 A0A1W2PQL4 384 aaPredicted RBP4.93□□□□□ -1.62
LRP6-203ENST00000538239 SELENOFO60613 162 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 OR7C1O76099 320 aaPredicted RBP4.93□□□□□ -1.62
LRP6-203ENST00000538239 SERPINE2P07093 398 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 ACP2P11117 423 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 EPHA8P29322 1005 aaPredicted RBP4.93□□□□□ -1.62
LRP6-203ENST00000538239 MAP2K3P46734 347 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 RNF4P78317 190 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 NTRK2Q16620 822 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 ANKRD16Q6P6B7 361 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 DCXRQ7Z4W1 244 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 B3GNT8Q7Z7M8 397 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 SLC35F3Q8IY50 421 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 MAML2Q8IZL2 1156 aaPredicted RBP4.93□□□□□ -1.62
LRP6-203ENST00000538239 OR6T1Q8NGN1 323 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 CD300LFQ8TDQ1 290 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 AMBRA1Q9C0C7 1298 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 WDR76Q9H967 626 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 ETAA1Q9NY74 926 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 PIGLQ9Y2B2 252 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 V9GY05 133 aa4.93□□□□□ -1.62
LRP6-203ENST00000538239 IGHV5-51A0A0C4DH38 117 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 ANKRD34BA5PLL1 514 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 AGAP5A6NIR3 686 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 SLC22A20A6NK97 555 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 M0R082 166 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 CXCL13O43927 109 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 ELAVL4P26378 380 aaKnown RBP4.92□□□□□ -1.62
LRP6-203ENST00000538239 NR4A2P43354 598 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 EMDP50402 254 aa4.92□□□□□ -1.62
LRP6-203ENST00000538239 PPP5CP53041 499 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms