RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 CHI3L2Q15782 390 aa7.77□□□□□ -1.17
USP28-205ENST00000537706 GGTA1PQ4G0N0 100 aa7.77□□□□□ -1.17
USP28-205ENST00000537706 SPIN4Q56A73 249 aa7.77□□□□□ -1.17
USP28-205ENST00000537706 ACSM2BQ68CK6 577 aa7.77□□□□□ -1.17
USP28-205ENST00000537706 PAQR6Q6TCH4 344 aa7.77□□□□□ -1.17
USP28-205ENST00000537706 USP51Q70EK9 711 aa7.77□□□□□ -1.17
USP28-205ENST00000537706 SPICQ8N5J4 248 aa7.77□□□□□ -1.17
USP28-205ENST00000537706 CDC26Q8NHZ8 85 aa7.77□□□□□ -1.17
USP28-205ENST00000537706 NMUR2Q9GZQ4 415 aa7.77□□□□□ -1.17
USP28-205ENST00000537706 MYLK2Q9H1R3 596 aa7.77□□□□□ -1.17
USP28-205ENST00000537706 GLIPR2Q9H4G4 154 aa7.77□□□□□ -1.17
USP28-205ENST00000537706 SIRT3Q9NTG7 399 aaPredicted RBP7.77□□□□□ -1.17
USP28-205ENST00000537706 DSPPQ9NZW4 1301 aa7.77□□□□□ -1.17
USP28-205ENST00000537706 TAAR3PQ9P1P4 343 aa7.77□□□□□ -1.17
USP28-205ENST00000537706 KIF17Q9P2E2 1029 aa7.77□□□□□ -1.17
USP28-205ENST00000537706 EMCNQ9ULC0 261 aa7.77□□□□□ -1.17
USP28-205ENST00000537706 TRAPPC4Q9Y296 219 aa7.77□□□□□ -1.17
USP28-205ENST00000537706 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.77□□□□□ -1.17
USP28-205ENST00000537706 PCNX3Q9H6A9 2034 aa7.77□□□□□ -1.17
USP28-205ENST00000537706 TRAV40A0A0B4J280 105 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 ATP5HO75947 161 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 PLATP00750 562 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 PROCP04070 461 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 TSPAN8P19075 237 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 C2orf80Q0P641 193 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 LCP2Q13094 533 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 CCDC153Q494R4 210 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 FOXB2Q5VYV0 432 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 KLC3Q6P597 504 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 ZCCHC12Q6PEW1 402 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 CCDC91Q7Z6B0 441 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 LCA5Q86VQ0 697 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 NUDCD3Q8IVD9 361 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 KLHL36Q8N4N3 616 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 OR10S1Q8NGN2 331 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 ZFP28Q8NHY6 868 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 RHEBL1Q8TAI7 183 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 THOC1Q96FV9 657 aaKnown RBP7.76□□□□□ -1.17
USP28-205ENST00000537706 C16orf58Q96GQ5 468 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 MS4A4EQ96PG1 132 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 GPR22Q99680 433 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 B9D2Q9BPU9 175 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 SIKE1Q9BRV8 207 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 MECRQ9BV79 373 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 SF3B5Q9BWJ5 86 aaKnown RBP7.76□□□□□ -1.17
USP28-205ENST00000537706 BTBD2Q9BX70 525 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 C16orf95Q9H693 158 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 SAP30LQ9HAJ7 183 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 ACER3Q9NUN7 267 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 SLCO1C1Q9NYB5 712 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 TMEM181Q9P2C4 612 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 CHRNA9Q9UGM1 479 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 LCE6AA0A183 80 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 OR7A17O14581 309 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 OIP5O43482 229 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 GPR137BO60478 399 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 HNRNPCL1O60812 293 aaKnown RBP7.76□□□□□ -1.17
USP28-205ENST00000537706 CYP7B1O75881 506 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 NHLRC4P0CG21 123 aaPredicted RBP7.76□□□□□ -1.17
USP28-205ENST00000537706 CRABP2P29373 138 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 SESN3P58005 492 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 SLC17A1Q14916 467 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 PCLAFQ15004 111 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 ALKBH6Q3KRA9 238 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 KLHL26Q53HC5 615 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 ESCO2Q56NI9 601 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 GPR157Q5UAW9 335 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 ASRGL1Q7L266 308 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 ZAR1Q86SH2 424 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 LRTOMTQ8WZ04 291 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 HOXB13Q92826 284 aaPredicted RBP7.76□□□□□ -1.17
USP28-205ENST00000537706 UPRTQ96BW1 309 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 AMDHD1Q96NU7 426 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 THUMPD3Q9BV44 507 aaKnown RBP7.76□□□□□ -1.17
USP28-205ENST00000537706 TMEM120AQ9BXJ8 343 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 LRMDAQ9H2I8 198 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 GIN1Q9NXP7 522 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 CPSF2Q9P2I0 782 aaKnown RBP7.76□□□□□ -1.17
USP28-205ENST00000537706 DTNAQ9Y4J8 743 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 U3KQK5 164 aa7.76□□□□□ -1.17
USP28-205ENST00000537706 EPPK1P58107 5090 aaKnown RBP7.76□□□□□ -1.17
USP28-205ENST00000537706 A0A0G2JND7 137 aa7.75□□□□□ -1.17
USP28-205ENST00000537706 K7EIL1 84 aa7.75□□□□□ -1.17
USP28-205ENST00000537706 SERPINE1P05121 402 aa7.75□□□□□ -1.17
USP28-205ENST00000537706 ACP2P11117 423 aa7.75□□□□□ -1.17
USP28-205ENST00000537706 PAX8Q06710 450 aa7.75□□□□□ -1.17
USP28-205ENST00000537706 STX3Q13277 289 aa7.75□□□□□ -1.17
USP28-205ENST00000537706 CDK5R2Q13319 367 aa7.75□□□□□ -1.17
USP28-205ENST00000537706 FAM83EQ2M2I3 478 aa7.75□□□□□ -1.17
USP28-205ENST00000537706 FAM91A1Q658Y4 838 aa7.75□□□□□ -1.17
USP28-205ENST00000537706 DHRS7BQ6IAN0 325 aaPredicted RBP7.75□□□□□ -1.17
USP28-205ENST00000537706 RGS7BPQ6MZT1 257 aaPredicted RBP7.75□□□□□ -1.17
USP28-205ENST00000537706 MEPCEQ7L2J0 689 aaKnown RBP7.75□□□□□ -1.17
USP28-205ENST00000537706 CMC1Q7Z7K0 106 aa7.75□□□□□ -1.17
USP28-205ENST00000537706 MDP1Q86V88 176 aa7.75□□□□□ -1.17
USP28-205ENST00000537706 C1orf174Q8IYL3 243 aa7.75□□□□□ -1.17
USP28-205ENST00000537706 GALNT4Q8N4A0 578 aa7.75□□□□□ -1.17
USP28-205ENST00000537706 ZNF563Q8TA94 476 aa7.75□□□□□ -1.17
USP28-205ENST00000537706 CCL17Q92583 94 aa7.75□□□□□ -1.17
USP28-205ENST00000537706 DDIT4LQ96D03 193 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms