RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 MRPL39Q9NYK5 338 aaKnown RBP12.96□□□□□ -0.33
USP28-204ENST00000537642 GMPR2Q9P2T1 348 aaKnown RBP12.96□□□□□ -0.33
USP28-204ENST00000537642 SLC7A7Q9UM01 511 aa12.96□□□□□ -0.33
USP28-204ENST00000537642 M0R1B8 84 aa12.95□□□□□ -0.34
USP28-204ENST00000537642 TMCC2O75069 709 aa12.95□□□□□ -0.34
USP28-204ENST00000537642 SLC43A1O75387 559 aa12.95□□□□□ -0.34
USP28-204ENST00000537642 HLA-DOBP13765 273 aa12.95□□□□□ -0.34
USP28-204ENST00000537642 NQO1P15559 274 aaKnown RBP12.95□□□□□ -0.34
USP28-204ENST00000537642 PTAFRP25105 342 aa12.95□□□□□ -0.34
USP28-204ENST00000537642 CDH11P55287 796 aa12.95□□□□□ -0.34
USP28-204ENST00000537642 PGGHGQ32M88 737 aa12.95□□□□□ -0.34
USP28-204ENST00000537642 HIKESHIQ53FT3 197 aa12.95□□□□□ -0.34
USP28-204ENST00000537642 PRSS57Q6UWY2 283 aa12.95□□□□□ -0.34
USP28-204ENST00000537642 NHLRC1Q6VVB1 395 aa12.95□□□□□ -0.34
USP28-204ENST00000537642 SPATA21Q7Z572 469 aa12.95□□□□□ -0.34
USP28-204ENST00000537642 YTHDF3Q7Z739 585 aaKnown RBP12.95□□□□□ -0.34
USP28-204ENST00000537642 UEVLDQ8IX04 471 aa12.95□□□□□ -0.34
USP28-204ENST00000537642 SLC15A3Q8IY34 581 aa12.95□□□□□ -0.34
USP28-204ENST00000537642 MICU2Q8IYU8 434 aa12.95□□□□□ -0.34
USP28-204ENST00000537642 TMEM123Q8N131 208 aa12.95□□□□□ -0.34
USP28-204ENST00000537642 C10orf53Q8N6V4 93 aa12.95□□□□□ -0.34
USP28-204ENST00000537642 OR2T12Q8NG77 320 aa12.95□□□□□ -0.34
USP28-204ENST00000537642 OR1K1Q8NGR3 316 aa12.95□□□□□ -0.34
USP28-204ENST00000537642 PROX1Q92786 737 aa12.95□□□□□ -0.34
USP28-204ENST00000537642 OR2M2Q96R28 347 aa12.95□□□□□ -0.34
USP28-204ENST00000537642 PRSS27Q9BQR3 290 aa12.95□□□□□ -0.34
USP28-204ENST00000537642 ZNF426Q9BUY5 554 aa12.95□□□□□ -0.34
USP28-204ENST00000537642 CXorf56Q9H5V9 222 aa12.95□□□□□ -0.34
USP28-204ENST00000537642 CISD1Q9NZ45 108 aaKnown RBP12.95□□□□□ -0.34
USP28-204ENST00000537642 BAG5Q9UL15 447 aa12.95□□□□□ -0.34
USP28-204ENST00000537642 MGAT4BQ9UQ53 548 aa12.95□□□□□ -0.34
USP28-204ENST00000537642 SH3GLB1Q9Y371 365 aa12.95□□□□□ -0.34
USP28-204ENST00000537642 OVOL3O00110 214 aa12.94□□□□□ -0.34
USP28-204ENST00000537642 PLPP3O14495 311 aa12.94□□□□□ -0.34
USP28-204ENST00000537642 SHOX2O60902 331 aaPredicted RBP12.94□□□□□ -0.34
USP28-204ENST00000537642 MT-ATP6P00846 226 aa12.94□□□□□ -0.34
USP28-204ENST00000537642 KDELR2P33947 212 aa12.94□□□□□ -0.34
USP28-204ENST00000537642 PRPS1P60891 318 aa12.94□□□□□ -0.34
USP28-204ENST00000537642 RPS4XP62701 263 aaKnown RBP12.94□□□□□ -0.34
USP28-204ENST00000537642 ROR2Q01974 943 aaKnown RBP12.94□□□□□ -0.34
USP28-204ENST00000537642 PUDPQ08623 228 aa12.94□□□□□ -0.34
USP28-204ENST00000537642 PMS2P3Q13401 168 aa12.94□□□□□ -0.34
USP28-204ENST00000537642 TBRG1Q3YBR2 411 aa12.94□□□□□ -0.34
USP28-204ENST00000537642 LRRC23Q53EV4 343 aaPredicted RBP12.94□□□□□ -0.34
USP28-204ENST00000537642 CYBRD1Q53TN4 286 aa12.94□□□□□ -0.34
USP28-204ENST00000537642 C1QTNF12Q5T7M4 302 aa12.94□□□□□ -0.34
USP28-204ENST00000537642 TTC33Q6PID6 262 aaPredicted RBP12.94□□□□□ -0.34
USP28-204ENST00000537642 WDFY1Q8IWB7 410 aa12.94□□□□□ -0.34
USP28-204ENST00000537642 OR5J2Q8NH18 312 aa12.94□□□□□ -0.34
USP28-204ENST00000537642 BCL2L2Q92843 193 aaPredicted RBP12.94□□□□□ -0.34
USP28-204ENST00000537642 MPP4Q96JB8 637 aa12.94□□□□□ -0.34
USP28-204ENST00000537642 RADILQ96JH8 1075 aa12.94□□□□□ -0.34
USP28-204ENST00000537642 MYLK2Q9H1R3 596 aa12.94□□□□□ -0.34
USP28-204ENST00000537642 NELFAQ9H3P2 528 aa12.94□□□□□ -0.34
USP28-204ENST00000537642 MAGED1Q9Y5V3 778 aaPredicted RBP12.94□□□□□ -0.34
USP28-204ENST00000537642 C2CD3Q4AC94 2353 aa12.94□□□□□ -0.34
USP28-204ENST00000537642 ELOVL7A1L3X0 281 aa12.93□□□□□ -0.34
USP28-204ENST00000537642 E7EQL1 145 aa12.93□□□□□ -0.34
USP28-204ENST00000537642 RPL36A-HNRNPH2H7BZ11 118 aa12.93□□□□□ -0.34
USP28-204ENST00000537642 KPNA4O00629 521 aaPredicted RBP12.93□□□□□ -0.34
USP28-204ENST00000537642 AKAP8O43823 692 aaKnown RBP12.93□□□□□ -0.34
USP28-204ENST00000537642 CH25HO95992 272 aa12.93□□□□□ -0.34
USP28-204ENST00000537642 IFNA14P01570 189 aa12.93□□□□□ -0.34
USP28-204ENST00000537642 CD8AP01732 235 aa12.93□□□□□ -0.34
USP28-204ENST00000537642 FOSL1P15407 271 aa12.93□□□□□ -0.34
USP28-204ENST00000537642 DRD4P21917 467 aa12.93□□□□□ -0.34
USP28-204ENST00000537642 OR1E2P47887 323 aa12.93□□□□□ -0.34
USP28-204ENST00000537642 POU3F1Q03052 451 aaPredicted RBP12.93□□□□□ -0.34
USP28-204ENST00000537642 ZNF74Q16587 644 aa12.93□□□□□ -0.34
USP28-204ENST00000537642 PHYHD1Q5SRE7 291 aa12.93□□□□□ -0.34
USP28-204ENST00000537642 HMBOX1Q6NT76 420 aa12.93□□□□□ -0.34
USP28-204ENST00000537642 C8orf82Q6P1X6 216 aaPredicted RBP12.93□□□□□ -0.34
USP28-204ENST00000537642 SLC22A25Q6T423 547 aa12.93□□□□□ -0.34
USP28-204ENST00000537642 KLHL24Q6TFL4 600 aa12.93□□□□□ -0.34
USP28-204ENST00000537642 B3GLCTQ6Y288 498 aa12.93□□□□□ -0.34
USP28-204ENST00000537642 ARPINQ7Z6K5 226 aa12.93□□□□□ -0.34
USP28-204ENST00000537642 GPR137CQ8N3F9 429 aa12.93□□□□□ -0.34
USP28-204ENST00000537642 ZNF837Q96EG3 531 aaPredicted RBP12.93□□□□□ -0.34
USP28-204ENST00000537642 TXNDC15Q96J42 360 aa12.93□□□□□ -0.34
USP28-204ENST00000537642 Q96MF0 132 aa12.93□□□□□ -0.34
USP28-204ENST00000537642 TRAF4Q9BUZ4 470 aaPredicted RBP12.93□□□□□ -0.34
USP28-204ENST00000537642 EMC6Q9BV81 110 aa12.93□□□□□ -0.34
USP28-204ENST00000537642 FAM107BQ9H098 131 aa12.93□□□□□ -0.34
USP28-204ENST00000537642 GPR35Q9HC97 309 aa12.93□□□□□ -0.34
USP28-204ENST00000537642 MED29Q9NX70 200 aa12.93□□□□□ -0.34
USP28-204ENST00000537642 AP3M1Q9Y2T2 418 aa12.93□□□□□ -0.34
USP28-204ENST00000537642 NOX1Q9Y5S8 564 aa12.93□□□□□ -0.34
USP28-204ENST00000537642 A0A096LPE4 126 aa12.92□□□□□ -0.34
USP28-204ENST00000537642 A0A1W2PPZ6 126 aa12.92□□□□□ -0.34
USP28-204ENST00000537642 NME4O00746 187 aa12.92□□□□□ -0.34
USP28-204ENST00000537642 WNT11O96014 354 aa12.92□□□□□ -0.34
USP28-204ENST00000537642 ADORA3P0DMS8 318 aa12.92□□□□□ -0.34
USP28-204ENST00000537642 LSP1P33241 339 aa12.92□□□□□ -0.34
USP28-204ENST00000537642 CDKN1AP38936 164 aa12.92□□□□□ -0.34
USP28-204ENST00000537642 SLC7A2P52569 658 aa12.92□□□□□ -0.34
USP28-204ENST00000537642 SH3BGRP55822 239 aaPredicted RBP12.92□□□□□ -0.34
USP28-204ENST00000537642 ATP5J2P56134 94 aa12.92□□□□□ -0.34
USP28-204ENST00000537642 TAS2R41P59536 307 aa12.92□□□□□ -0.34
USP28-204ENST00000537642 ARF1P84077 181 aaKnown RBP12.92□□□□□ -0.34
USP28-204ENST00000537642 LIPEQ05469 1076 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms