RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 C1QTNF12Q5T7M4 302 aa12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 ANKRD16Q6P6B7 361 aa12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 DNM1P46Q6ZS02 220 aa12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 UEVLDQ8IX04 471 aa12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 VANGL1Q8TAA9 524 aaPredicted RBP12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 FBXO17Q96EF6 278 aa12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 BOD1Q96IK1 185 aa12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 MOGAT1Q96PD6 335 aa12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 OR2M2Q96R28 347 aa12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 EPYCQ99645 322 aa12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 MCHR1Q99705 422 aa12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 RHNO1Q9BSD3 238 aa12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 TMEM120AQ9BXJ8 343 aa12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 ASPNQ9BXN1 380 aa12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 CRLF2Q9HC73 371 aa12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 GPR35Q9HC97 309 aa12.46□□□□□ -0.41
RTN3P1-201ENST00000536295 CSPG4Q6UVK1 2322 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 ARPC4-TTLL3A0A0A6YYG9 625 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 CPSF4LA6NMK7 179 aaKnown RBP12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 LRRN3E7EW58 273 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 MS4A18H0YCH9 400 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 M0R3G1 203 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 TRAF3IP2O43734 574 aaPredicted RBP12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 AKAP8O43823 692 aaKnown RBP12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 FZD7O75084 574 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 SERPINI2O75830 405 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 SEC14L2O76054 403 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 CRYAAP02489 173 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 BGLAPP02818 100 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 TP53P04637 393 aaPredicted RBP12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 SH3BGRP55822 239 aaPredicted RBP12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 POU3F1Q03052 451 aaPredicted RBP12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 CHRNB3Q05901 458 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 PMS2P3Q13401 168 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 MFSD13AQ14CX5 517 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 CEACAM16Q2WEN9 425 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 MS4A18Q3C1V0 323 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 VHLLQ6RSH7 139 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 CLEC2AQ6UVW9 174 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 ZNF525Q8N782 197 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 PIK3C3Q8NEB9 887 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 GPR32P1Q8NGA4 272 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 OR6T1Q8NGN1 323 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 OR10A6Q8NH74 314 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 SLC26A7Q8TE54 656 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 ZNF837Q96EG3 531 aaPredicted RBP12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 ARHGDIGQ99819 225 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 SIKE1Q9BRV8 207 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 EMC6Q9BV81 110 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 NELFAQ9H3P2 528 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 KAT8Q9H7Z6 458 aaKnown RBP12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 SEC61A2Q9H9S3 476 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 MED29Q9NX70 200 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 CORINQ9Y5Q5 1042 aa12.45□□□□□ -0.42
RTN3P1-201ENST00000536295 TLN2Q9Y4G6 2542 aa12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 RPL36A-HNRNPH2H7BZ11 118 aa12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 H7C417 338 aa12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 FBP2O00757 339 aa12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 CECR9P0C854 216 aa12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 BMP4P12644 408 aa12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 AHCYP23526 432 aa12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 CAPZA2P47755 286 aa12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 NPTX1Q15818 432 aa12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 ENTPD8Q5MY95 495 aa12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 PHYHD1Q5SRE7 291 aa12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 METTL21CQ5VZV1 264 aa12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 PRIMA1Q86XR5 153 aa12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 RBM45Q8IUH3 476 aaKnown RBP12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 TMEM123Q8N131 208 aa12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 ADPRHL1Q8NDY3 354 aa12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 OR4D11Q8NGI4 311 aa12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 OR6S1Q8NH40 331 aa12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 MAGEE2Q8TD90 523 aaPredicted RBP12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 TSPEARQ8WU66 669 aa12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 SLC41A3Q96GZ6 507 aa12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 TXNDC15Q96J42 360 aa12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 TMEM43Q9BTV4 400 aa12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 KATNB1Q9BVA0 655 aa12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 EVA1AQ9H8M9 152 aa12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 PMF1-BGLAPU3KQ54 211 aa12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 HIVEP2P31629 2446 aa12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 HEATR1Q9H583 2144 aaKnown RBP12.44□□□□□ -0.42
RTN3P1-201ENST00000536295 PLCE1Q9P212 2302 aa12.43□□□□□ -0.42
RTN3P1-201ENST00000536295 LOC102725191A0A1B0GVB3 256 aa12.43□□□□□ -0.42
RTN3P1-201ENST00000536295 SLC35F4A4IF30 521 aa12.43□□□□□ -0.42
RTN3P1-201ENST00000536295 C11orf98E9PRG8 122 aa12.43□□□□□ -0.42
RTN3P1-201ENST00000536295 FMO6PO60774 539 aa12.43□□□□□ -0.42
RTN3P1-201ENST00000536295 LY6HO94772 140 aa12.43□□□□□ -0.42
RTN3P1-201ENST00000536295 C8BP07358 591 aa12.43□□□□□ -0.42
RTN3P1-201ENST00000536295 CELA3BP08861 270 aa12.43□□□□□ -0.42
RTN3P1-201ENST00000536295 PCGF2P35227 344 aa12.43□□□□□ -0.42
RTN3P1-201ENST00000536295 IDH3GP51553 393 aaPredicted RBP12.43□□□□□ -0.42
RTN3P1-201ENST00000536295 NAAAQ02083 359 aa12.43□□□□□ -0.42
RTN3P1-201ENST00000536295 PUDPQ08623 228 aa12.43□□□□□ -0.42
RTN3P1-201ENST00000536295 NPRL3Q12980 569 aa12.43□□□□□ -0.42
RTN3P1-201ENST00000536295 RABL3Q5HYI8 236 aa12.43□□□□□ -0.42
RTN3P1-201ENST00000536295 SWT1Q5T5J6 900 aaKnown RBP12.43□□□□□ -0.42
RTN3P1-201ENST00000536295 ZNF613Q6PF04 617 aa12.43□□□□□ -0.42
RTN3P1-201ENST00000536295 WDR88Q6ZMY6 472 aa12.43□□□□□ -0.42
RTN3P1-201ENST00000536295 PATL1Q86TB9 770 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms