RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 ZNF311Q5JNZ3 666 aa11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 OGFOD2Q6N063 350 aa11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 C5orf46Q6UWT4 87 aa11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 MYPOPQ86VE0 399 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 SNX32Q86XE0 403 aa11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 TEX29Q8N6K0 151 aa11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 ZFAND2BQ8WV99 257 aa11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 SLC38A4Q969I6 547 aa11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 OXGR1Q96P68 337 aa11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 SPATA9Q9BWV2 254 aa11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 MS4A5Q9H3V2 200 aa11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 RMND5AQ9H871 391 aa11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 MEAF6Q9HAF1 191 aa11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 LPAR2Q9HBW0 351 aa11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 GPR35Q9HC97 309 aa11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 AIG1Q9NVV5 245 aa11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 SELENONQ9NZV5 590 aa11.21□□□□□ -0.61
TNFRSF1A-207ENST00000535958 DSPPQ9NZW4 1301 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 A0A0G2JPF8 293 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 TMEM229AB2RXF0 380 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 HNRNPCL2B2RXH8 293 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 HNRNPCL3B7ZW38 293 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 C5orf58C9J3I9 102 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 LYNX1G3V0Z9 82 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 M0R3G1 203 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 TM9SF1O15321 606 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 RGS16O15492 202 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 SPRY1O43609 319 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 HNRNPCL1O60812 293 aaKnown RBP11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 ZNF432O94892 652 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 RAB36O95755 333 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 C1QCP02747 245 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 IL6P05231 212 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 HNRNPCL4P0DMR1 293 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 LYNX1P0DP58 116 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 PRG2P13727 222 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 CFPP27918 469 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 NCALDP61601 193 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 STX3Q13277 289 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 RIN1Q13671 783 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 GSG1Q2KHT4 349 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 SLC9B1Q4ZJI4 515 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 RPS26P11Q5JNZ5 115 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 FAM69AQ5T7M9 428 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 CARD17Q5XLA6 110 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 NXNQ6DKJ4 435 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 SERPINA11Q86U17 422 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 UEVLDQ8IX04 471 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 RNF217Q8TC41 542 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 MRPL24Q96A35 216 aaKnown RBP11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 TMEM186Q96B77 213 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 TMEM19Q96HH6 336 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 TEX37Q96LM6 180 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 PAIP2Q9BPZ3 127 aaKnown RBP11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 PLA2G12AQ9BZM1 189 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 HIF1ANQ9NWT6 349 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 REV1Q9UBZ9 1251 aa11.2□□□□□ -0.62
TNFRSF1A-207ENST00000535958 A0A1W2PPW3 197 aa11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 TRPC5OSA6NMA1 111 aa11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 M0R082 166 aa11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 NPIPB7O75200 414 aa11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 TFP02787 698 aa11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 ALDOCP09972 364 aaKnown RBP11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 BGNP21810 368 aa11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 ACHEP22303 614 aa11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 EVX1P49640 407 aa11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 POU3F1Q03052 451 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 PDCD4Q53EL6 469 aaKnown RBP11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 C6orf10Q5SRN2 563 aa11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 CLIP4Q8N3C7 705 aa11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 C3orf56Q8N813 242 aa11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 OR51F2Q8NH61 342 aa11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 ZNF417Q8TAU3 575 aa11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 SLC38A5Q8WUX1 472 aa11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 RDH5Q92781 318 aa11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 KTI12Q96EK9 354 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 JMJD8Q96S16 334 aa11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 ZNF587Q96SQ5 575 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 SORT1Q99523 831 aa11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 SYT3Q9BQG1 590 aa11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 MRPL37Q9BZE1 423 aaKnown RBP11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 CENPHQ9H3R5 247 aa11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 RAD21L1Q9H4I0 556 aa11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 TPT1P8Q9HAU6 139 aa11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 KCNK9Q9NPC2 374 aa11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 ZNF346Q9UL40 294 aaKnown RBP11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 POFUT2Q9Y2G5 429 aa11.19□□□□□ -0.62
TNFRSF1A-207ENST00000535958 TMEM129A0AVI4 362 aa11.18□□□□□ -0.62
TNFRSF1A-207ENST00000535958 FTCDNL1E5RQL4 147 aa11.18□□□□□ -0.62
TNFRSF1A-207ENST00000535958 TRIM77I1YAP6 450 aa11.18□□□□□ -0.62
TNFRSF1A-207ENST00000535958 PPIHO43447 177 aaKnown RBP11.18□□□□□ -0.62
TNFRSF1A-207ENST00000535958 SLC22A3O75751 556 aa11.18□□□□□ -0.62
TNFRSF1A-207ENST00000535958 HLA-HP01893 362 aa11.18□□□□□ -0.62
TNFRSF1A-207ENST00000535958 MSMBP08118 114 aa11.18□□□□□ -0.62
TNFRSF1A-207ENST00000535958 IDO1P14902 403 aa11.18□□□□□ -0.62
TNFRSF1A-207ENST00000535958 TCN1P20061 433 aaPredicted RBP11.18□□□□□ -0.62
TNFRSF1A-207ENST00000535958 CBLP22681 906 aa11.18□□□□□ -0.62
TNFRSF1A-207ENST00000535958 NR4A1P22736 598 aa11.18□□□□□ -0.62
TNFRSF1A-207ENST00000535958 GRPRP30550 384 aa11.18□□□□□ -0.62
TNFRSF1A-207ENST00000535958 PTDSS1P48651 473 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms