RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 ZNF823P16415 610 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 SRMP19623 302 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 KITLGP21583 273 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 ATP5A1P25705 553 aaKnown RBP2.38□□□□□ -2.03
VBP1-203ENST00000535916 CHMLP26374 656 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 CD1BP29016 333 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 CD1CP29017 333 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 CDH5P33151 784 aaPredicted RBP2.38□□□□□ -2.03
VBP1-203ENST00000535916 RPL13AP40429 203 aaKnown RBP2.38□□□□□ -2.03
VBP1-203ENST00000535916 SSR1P43307 286 aaKnown RBP2.38□□□□□ -2.03
VBP1-203ENST00000535916 RPS10P46783 165 aaKnown RBP2.38□□□□□ -2.03
VBP1-203ENST00000535916 CSNK1EP49674 416 aaKnown RBP2.38□□□□□ -2.03
VBP1-203ENST00000535916 PLOD1Q02809 727 aaPredicted RBP2.38□□□□□ -2.03
VBP1-203ENST00000535916 LIPEQ05469 1076 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 VGLL4Q14135 290 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 LAGE3Q14657 143 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 PTGES3Q15185 160 aaKnown RBP2.38□□□□□ -2.03
VBP1-203ENST00000535916 CHRNA6Q15825 494 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 ZNF77Q15935 545 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 HIKESHIQ53FT3 197 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 FBXO48Q5FWF7 155 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 LGSNQ5TDP6 509 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 TTC19Q6DKK2 380 aaPredicted RBP2.38□□□□□ -2.03
VBP1-203ENST00000535916 TMEM53Q6P2H8 277 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 SCYL2Q6P3W7 929 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 APTXQ7Z2E3 356 aaKnown RBP2.38□□□□□ -2.03
VBP1-203ENST00000535916 CCDC50Q8IVM0 306 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 MFSD6LQ8IWD5 586 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 BPIFB2Q8N4F0 458 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 KIR3DL3Q8N743 410 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 ZSCAN4Q8NAM6 433 aaPredicted RBP2.38□□□□□ -2.03
VBP1-203ENST00000535916 SDR9C7Q8NEX9 313 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 OR9A1PQ8NGU1 263 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 SLC38A4Q969I6 547 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 UBE2E3Q969T4 207 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 KCNA7Q96RP8 456 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 MRPL37Q9BZE1 423 aaKnown RBP2.38□□□□□ -2.03
VBP1-203ENST00000535916 NXF5Q9H1B4 397 aaKnown RBP2.38□□□□□ -2.03
VBP1-203ENST00000535916 XKR8Q9H6D3 395 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 NIPAL2Q9H841 368 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 NT5MQ9NPB1 228 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 MEPEQ9NQ76 525 aaPredicted RBP2.38□□□□□ -2.03
VBP1-203ENST00000535916 TBC1D24Q9ULP9 559 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 ERVW-1Q9UQF0 538 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 AK6Q9Y3D8 172 aaKnown RBP2.38□□□□□ -2.03
VBP1-203ENST00000535916 OARD1Q9Y530 152 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 ALG6Q9Y672 507 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 MAD1L1Q9Y6D9 718 aa2.38□□□□□ -2.03
VBP1-203ENST00000535916 RLFQ13129 1914 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 TRBV6-6A0A0A6YYG2 114 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.37□□□□□ -2.03
VBP1-203ENST00000535916 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.37□□□□□ -2.03
VBP1-203ENST00000535916 F5H6K3 240 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 H6PDO95479 791 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 TIMP1P01033 207 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 IGFBP1P08833 259 aaPredicted RBP2.37□□□□□ -2.03
VBP1-203ENST00000535916 PRKACAP17612 351 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 POLR2EP19388 210 aaKnown RBP2.37□□□□□ -2.03
VBP1-203ENST00000535916 GNA11P29992 359 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 HNRNPH3P31942 346 aaKnown RBP2.37□□□□□ -2.03
VBP1-203ENST00000535916 QARSP47897 775 aaKnown RBP2.37□□□□□ -2.03
VBP1-203ENST00000535916 RPS14P62263 151 aaKnown RBP2.37□□□□□ -2.03
VBP1-203ENST00000535916 RPL8P62917 257 aaKnown RBP2.37□□□□□ -2.03
VBP1-203ENST00000535916 OTUD4Q01804 1114 aaKnown RBP2.37□□□□□ -2.03
VBP1-203ENST00000535916 KLRC3Q07444 240 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 PUDPQ08623 228 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 DNAJC3Q13217 504 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 PPIL2Q13356 520 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 IL18R1Q13478 541 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 NDUFA9Q16795 377 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 OR2B11Q5JQS5 317 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 PVRIGQ6DKI7 326 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 SLC8B1Q6J4K2 584 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 EIF3MQ7L2H7 374 aaKnown RBP2.37□□□□□ -2.03
VBP1-203ENST00000535916 CENPQQ7L2Z9 268 aaPredicted RBP2.37□□□□□ -2.03
VBP1-203ENST00000535916 SERPINA9Q86WD7 417 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 IFNEQ86WN2 208 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 IQCF2Q8IXL9 164 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 DHRSXQ8N5I4 330 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 OR4K14Q8NGD5 310 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 OR4D9Q8NGE8 314 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 ARNTL2Q8WYA1 636 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 NRGNQ92686 78 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 TMIGD2Q96BF3 282 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 PRRC1Q96M27 445 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 TSNARE1Q96NA8 513 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 MBOAT4Q96T53 435 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 CNN2Q99439 309 aaKnown RBP2.37□□□□□ -2.03
VBP1-203ENST00000535916 FMO2Q99518 471 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 SIKE1Q9BRV8 207 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 C20orf24Q9BUV8 137 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 RSPO3Q9BXY4 272 aaPredicted RBP2.37□□□□□ -2.03
VBP1-203ENST00000535916 RACGAP1Q9H0H5 632 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 RHBGQ9H310 441 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 CYP3A43Q9HB55 503 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 POPDC2Q9HBU9 364 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 MRPS30Q9NP92 439 aaKnown RBP2.37□□□□□ -2.03
VBP1-203ENST00000535916 EXOSC3Q9NQT5 275 aaKnown RBP2.37□□□□□ -2.03
VBP1-203ENST00000535916 IKZF2Q9UKS7 526 aa2.37□□□□□ -2.03
VBP1-203ENST00000535916 BARX2Q9UMQ3 279 aaPredicted RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms