RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 NKAIN4Q8IVV8 208 aa19.29■□□□□ 0.68
SSPN-204ENST00000535504 ZIC4Q8N9L1 334 aa19.29■□□□□ 0.68
SSPN-204ENST00000535504 RBM15BQ8NDT2 890 aaKnown RBP19.29■□□□□ 0.68
SSPN-204ENST00000535504 C1orf162Q8NEQ5 155 aaPredicted RBP19.29■□□□□ 0.68
SSPN-204ENST00000535504 POP5Q969H6 163 aaKnown RBP19.29■□□□□ 0.68
SSPN-204ENST00000535504 NDEL1Q9GZM8 345 aa19.29■□□□□ 0.68
SSPN-204ENST00000535504 SLC7A10Q9NS82 523 aa19.29■□□□□ 0.68
SSPN-204ENST00000535504 SEC14L4Q9UDX3 406 aa19.29■□□□□ 0.68
SSPN-204ENST00000535504 CD300AQ9UGN4 299 aa19.29■□□□□ 0.68
SSPN-204ENST00000535504 PRPF19Q9UMS4 504 aaKnown RBP19.29■□□□□ 0.68
SSPN-204ENST00000535504 ENPP4Q9Y6X5 453 aa19.29■□□□□ 0.68
SSPN-204ENST00000535504 PLPP3O14495 311 aa19.28■□□□□ 0.68
SSPN-204ENST00000535504 LYPD3O95274 346 aa19.28■□□□□ 0.68
SSPN-204ENST00000535504 SELENOPP49908 381 aa19.28■□□□□ 0.68
SSPN-204ENST00000535504 TAB1Q15750 504 aa19.28■□□□□ 0.68
SSPN-204ENST00000535504 MTX3Q5HYI7 312 aa19.28■□□□□ 0.68
SSPN-204ENST00000535504 C1QTNF12Q5T7M4 302 aa19.28■□□□□ 0.68
SSPN-204ENST00000535504 KLHL17Q6TDP4 642 aa19.28■□□□□ 0.68
SSPN-204ENST00000535504 ZNF730Q6ZMV8 503 aa19.28■□□□□ 0.68
SSPN-204ENST00000535504 C17orf78Q8N4C9 275 aa19.28■□□□□ 0.68
SSPN-204ENST00000535504 PYURFQ96I23 114 aa19.28■□□□□ 0.68
SSPN-204ENST00000535504 PRSS27Q9BQR3 290 aa19.28■□□□□ 0.68
SSPN-204ENST00000535504 LINC00470Q9BZP3 86 aa19.28■□□□□ 0.68
SSPN-204ENST00000535504 ANKRD19PQ9H560 264 aa19.28■□□□□ 0.68
SSPN-204ENST00000535504 A4GNTQ9UNA3 340 aa19.28■□□□□ 0.68
SSPN-204ENST00000535504 MAGED1Q9Y5V3 778 aaPredicted RBP19.28■□□□□ 0.68
SSPN-204ENST00000535504 V9GYQ6 96 aa19.28■□□□□ 0.68
SSPN-204ENST00000535504 OR5H1A6NKK0 313 aa19.27■□□□□ 0.68
SSPN-204ENST00000535504 LRRN3E7EW58 273 aa19.27■□□□□ 0.68
SSPN-204ENST00000535504 BLOC1S5-TXNDC5H3BN57 136 aa19.27■□□□□ 0.68
SSPN-204ENST00000535504 ARPC2O15144 300 aa19.27■□□□□ 0.68
SSPN-204ENST00000535504 OR7A10O76100 309 aa19.27■□□□□ 0.68
SSPN-204ENST00000535504 WNT11O96014 354 aa19.27■□□□□ 0.68
SSPN-204ENST00000535504 RHCEP18577 417 aa19.27■□□□□ 0.68
SSPN-204ENST00000535504 CDH2P19022 906 aaPredicted RBP19.27■□□□□ 0.68
SSPN-204ENST00000535504 FUT1P19526 365 aa19.27■□□□□ 0.68
SSPN-204ENST00000535504 EDNRAP25101 427 aa19.27■□□□□ 0.68
SSPN-204ENST00000535504 UGT2B15P54855 530 aa19.27■□□□□ 0.68
SSPN-204ENST00000535504 SH3BGRP55822 239 aaPredicted RBP19.27■□□□□ 0.68
SSPN-204ENST00000535504 SMIM11AP58511 58 aa19.27■□□□□ 0.68
SSPN-204ENST00000535504 KRTAP10-9P60411 292 aa19.27■□□□□ 0.68
SSPN-204ENST00000535504 LTBQ06643 244 aa19.27■□□□□ 0.68
SSPN-204ENST00000535504 C9orf135Q5VTT2 229 aa19.27■□□□□ 0.68
SSPN-204ENST00000535504 LSRQ86X29 649 aaPredicted RBP19.27■□□□□ 0.68
SSPN-204ENST00000535504 RNF113BQ8IZP6 322 aaKnown RBP19.27■□□□□ 0.68
SSPN-204ENST00000535504 LRGUKQ96M69 825 aa19.27■□□□□ 0.68
SSPN-204ENST00000535504 ADAD1Q96M93 576 aaKnown RBP19.27■□□□□ 0.68
SSPN-204ENST00000535504 ALKBH3Q96Q83 286 aaPredicted RBP19.27■□□□□ 0.68
SSPN-204ENST00000535504 C1orf21Q9H246 121 aa19.27■□□□□ 0.68
SSPN-204ENST00000535504 B3GAT1Q9P2W7 334 aa19.27■□□□□ 0.68
SSPN-204ENST00000535504 STX18Q9P2W9 335 aaKnown RBP19.27■□□□□ 0.68
SSPN-204ENST00000535504 AMDHD2Q9Y303 409 aa19.27■□□□□ 0.68
SSPN-204ENST00000535504 ITPR2Q14571 2701 aa19.26■□□□□ 0.67
SSPN-204ENST00000535504 A0A1W2PRG6 482 aa19.26■□□□□ 0.67
SSPN-204ENST00000535504 MCIDASD6RGH6 385 aa19.26■□□□□ 0.67
SSPN-204ENST00000535504 MS4A18H0YCH9 400 aa19.26■□□□□ 0.67
SSPN-204ENST00000535504 H1F0P07305 194 aaKnown RBP19.26■□□□□ 0.67
SSPN-204ENST00000535504 SAGP10523 405 aaPredicted RBP19.26■□□□□ 0.67
SSPN-204ENST00000535504 IFI30P13284 250 aa19.26■□□□□ 0.67
SSPN-204ENST00000535504 PAX7P23759 505 aa19.26■□□□□ 0.67
SSPN-204ENST00000535504 DNASE1P24855 282 aa19.26■□□□□ 0.67
SSPN-204ENST00000535504 MS4A18Q3C1V0 323 aa19.26■□□□□ 0.67
SSPN-204ENST00000535504 DNAL1Q4LDG9 190 aa19.26■□□□□ 0.67
SSPN-204ENST00000535504 TSPYL5Q86VY4 417 aaPredicted RBP19.26■□□□□ 0.67
SSPN-204ENST00000535504 OR6N1Q8NGY5 312 aa19.26■□□□□ 0.67
SSPN-204ENST00000535504 PFN4Q8NHR9 129 aa19.26■□□□□ 0.67
SSPN-204ENST00000535504 ACOT11Q8WXI4 607 aaPredicted RBP19.26■□□□□ 0.67
SSPN-204ENST00000535504 PLPPR2Q96GM1 343 aa19.26■□□□□ 0.67
SSPN-204ENST00000535504 TRIM15Q9C019 465 aa19.26■□□□□ 0.67
SSPN-204ENST00000535504 RHCGQ9UBD6 479 aa19.26■□□□□ 0.67
SSPN-204ENST00000535504 ABCA4P78363 2273 aa19.25■□□□□ 0.67
SSPN-204ENST00000535504 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.25■□□□□ 0.67
SSPN-204ENST00000535504 J3KTA2 159 aa19.25■□□□□ 0.67
SSPN-204ENST00000535504 TRAF3IP2O43734 574 aaPredicted RBP19.25■□□□□ 0.67
SSPN-204ENST00000535504 THBDP07204 575 aa19.25■□□□□ 0.67
SSPN-204ENST00000535504 CD3EP07766 207 aa19.25■□□□□ 0.67
SSPN-204ENST00000535504 ITGA5P08648 1049 aa19.25■□□□□ 0.67
SSPN-204ENST00000535504 NTF4P34130 210 aa19.25■□□□□ 0.67
SSPN-204ENST00000535504 MSX2P35548 267 aaPredicted RBP19.25■□□□□ 0.67
SSPN-204ENST00000535504 UBE2NP61088 152 aaKnown RBP19.25■□□□□ 0.67
SSPN-204ENST00000535504 ZP4Q12836 540 aa19.25■□□□□ 0.67
SSPN-204ENST00000535504 KEAP1Q14145 624 aa19.25■□□□□ 0.67
SSPN-204ENST00000535504 FXNQ16595 210 aa19.25■□□□□ 0.67
SSPN-204ENST00000535504 FGD3Q5JSP0 725 aa19.25■□□□□ 0.67
SSPN-204ENST00000535504 CARD17Q5XLA6 110 aa19.25■□□□□ 0.67
SSPN-204ENST00000535504 RINLQ6ZS11 566 aa19.25■□□□□ 0.67
SSPN-204ENST00000535504 DHFR2Q86XF0 187 aa19.25■□□□□ 0.67
SSPN-204ENST00000535504 NINJ1Q92982 152 aa19.25■□□□□ 0.67
SSPN-204ENST00000535504 BPIFA2Q96DR5 249 aa19.25■□□□□ 0.67
SSPN-204ENST00000535504 MOV10Q9HCE1 1003 aaKnown RBP19.25■□□□□ 0.67
SSPN-204ENST00000535504 MEPEQ9NQ76 525 aaPredicted RBP19.25■□□□□ 0.67
SSPN-204ENST00000535504 ACTR3BQ9P1U1 418 aa19.25■□□□□ 0.67
SSPN-204ENST00000535504 TMEM5Q9Y2B1 443 aa19.25■□□□□ 0.67
SSPN-204ENST00000535504 MAST4O15021 2626 aa19.24■□□□□ 0.67
SSPN-204ENST00000535504 DEFB108AA8MXU0 73 aa19.24■□□□□ 0.67
SSPN-204ENST00000535504 GYG2O15488 501 aa19.24■□□□□ 0.67
SSPN-204ENST00000535504 ENTPD5O75356 428 aa19.24■□□□□ 0.67
SSPN-204ENST00000535504 BCL10O95999 233 aa19.24■□□□□ 0.67
SSPN-204ENST00000535504 FABP3P05413 133 aa19.24■□□□□ 0.67
SSPN-204ENST00000535504 ASAH2BP0C7U1 165 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms