RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 KLHL14Q9P2G3 628 aa14.11□□□□□ -0.15
CLSTN3-204ENST00000535313 LEF1Q9UJU2 399 aaPredicted RBP14.11□□□□□ -0.15
CLSTN3-204ENST00000535313 CORINQ9Y5Q5 1042 aa14.11□□□□□ -0.15
CLSTN3-204ENST00000535313 CHD3Q12873 2000 aaKnown RBP14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 IGKV1D-42A0A075B6H8 117 aa14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 LOC102725191A0A1B0GVB3 256 aa14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 HMGB1P1B2RPK0 211 aaPredicted RBP14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 RPL36A-HNRNPH2H7BZ11 118 aa14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 NQO1P15559 274 aaKnown RBP14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 SLC25A16P16260 332 aa14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 CBLP22681 906 aa14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 TUBA1BP68363 451 aa14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 TUBA4AP68366 448 aa14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 ARF1P84077 181 aaKnown RBP14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 OR1Q1Q15612 314 aa14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 ADRM1Q16186 407 aa14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 C3orf36Q3SXR2 165 aa14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 DLEU7Q6UYE1 221 aa14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 TUBA1AQ71U36 451 aa14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 UEVLDQ8IX04 471 aa14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 C11orf65Q8NCR3 313 aa14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 ADPRHL1Q8NDY3 354 aa14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 PIK3C3Q8NEB9 887 aa14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 OR6S1Q8NH40 331 aa14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 CPPED1Q9BRF8 314 aaPredicted RBP14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 ASPNQ9BXN1 380 aa14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 GPR35Q9HC97 309 aa14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 CA10Q9NS85 328 aa14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 CRNNQ9UBG3 495 aaPredicted RBP14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 ADAM21Q9UKJ8 722 aa14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 TRIM33Q9UPN9 1127 aa14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 FKBP7Q9Y680 259 aa14.1□□□□□ -0.15
CLSTN3-204ENST00000535313 A0A087WUJ7 227 aa14.09□□□□□ -0.15
CLSTN3-204ENST00000535313 A0A0B4J2E0 115 aa14.09□□□□□ -0.15
CLSTN3-204ENST00000535313 A0A1B0GX12 115 aa14.09□□□□□ -0.15
CLSTN3-204ENST00000535313 A8MV72 311 aaPredicted RBP14.09□□□□□ -0.15
CLSTN3-204ENST00000535313 ANGPT2O15123 496 aa14.09□□□□□ -0.15
CLSTN3-204ENST00000535313 F12P00748 615 aaPredicted RBP14.09□□□□□ -0.15
CLSTN3-204ENST00000535313 CECR9P0C854 216 aa14.09□□□□□ -0.15
CLSTN3-204ENST00000535313 SERPINF1P36955 418 aa14.09□□□□□ -0.15
CLSTN3-204ENST00000535313 NAAAQ02083 359 aa14.09□□□□□ -0.15
CLSTN3-204ENST00000535313 LOXL1Q08397 574 aaPredicted RBP14.09□□□□□ -0.15
CLSTN3-204ENST00000535313 CYP51A1Q16850 503 aa14.09□□□□□ -0.15
CLSTN3-204ENST00000535313 SWI5Q1ZZU3 235 aa14.09□□□□□ -0.15
CLSTN3-204ENST00000535313 RUNDC3AQ59EK9 446 aa14.09□□□□□ -0.15
CLSTN3-204ENST00000535313 DHDDSQ86SQ9 333 aa14.09□□□□□ -0.15
CLSTN3-204ENST00000535313 C10orf53Q8N6V4 93 aa14.09□□□□□ -0.15
CLSTN3-204ENST00000535313 FAM169BQ8N8A8 192 aa14.09□□□□□ -0.15
CLSTN3-204ENST00000535313 SCAIQ8N9R8 606 aa14.09□□□□□ -0.15
CLSTN3-204ENST00000535313 CKAP2Q8WWK9 683 aa14.09□□□□□ -0.15
CLSTN3-204ENST00000535313 STON2Q8WXE9 905 aa14.09□□□□□ -0.15
CLSTN3-204ENST00000535313 THOC1Q96FV9 657 aaKnown RBP14.09□□□□□ -0.15
CLSTN3-204ENST00000535313 MAGEB18Q96M61 343 aa14.09□□□□□ -0.15
CLSTN3-204ENST00000535313 TNFRSF13CQ96RJ3 184 aa14.09□□□□□ -0.15
CLSTN3-204ENST00000535313 CRLF2Q9HC73 371 aa14.09□□□□□ -0.15
CLSTN3-204ENST00000535313 NDUFAF1Q9Y375 327 aa14.09□□□□□ -0.15
CLSTN3-204ENST00000535313 COL6A5A8TX70 2615 aa14.09□□□□□ -0.15
CLSTN3-204ENST00000535313 TRAF3IP2O43734 574 aaPredicted RBP14.08□□□□□ -0.16
CLSTN3-204ENST00000535313 GPRIN2O60269 458 aa14.08□□□□□ -0.16
CLSTN3-204ENST00000535313 MFN2O95140 757 aa14.08□□□□□ -0.16
CLSTN3-204ENST00000535313 IGLV1-44P01699 117 aa14.08□□□□□ -0.16
CLSTN3-204ENST00000535313 RBBP4Q09028 425 aa14.08□□□□□ -0.16
CLSTN3-204ENST00000535313 PMS2P3Q13401 168 aa14.08□□□□□ -0.16
CLSTN3-204ENST00000535313 MST1LQ2TV78 715 aa14.08□□□□□ -0.16
CLSTN3-204ENST00000535313 CEACAM16Q2WEN9 425 aa14.08□□□□□ -0.16
CLSTN3-204ENST00000535313 TMEM249Q2WGJ8 235 aa14.08□□□□□ -0.16
CLSTN3-204ENST00000535313 SWT1Q5T5J6 900 aaKnown RBP14.08□□□□□ -0.16
CLSTN3-204ENST00000535313 VHLLQ6RSH7 139 aa14.08□□□□□ -0.16
CLSTN3-204ENST00000535313 SLC46A3Q7Z3Q1 461 aa14.08□□□□□ -0.16
CLSTN3-204ENST00000535313 CCDC36Q8IYA8 594 aa14.08□□□□□ -0.16
CLSTN3-204ENST00000535313 SMYD1Q8NB12 490 aa14.08□□□□□ -0.16
CLSTN3-204ENST00000535313 OR4F15Q8NGB8 312 aa14.08□□□□□ -0.16
CLSTN3-204ENST00000535313 C10orf105Q8TEF2 133 aa14.08□□□□□ -0.16
CLSTN3-204ENST00000535313 PROX1Q92786 737 aa14.08□□□□□ -0.16
CLSTN3-204ENST00000535313 OR2M2Q96R28 347 aa14.08□□□□□ -0.16
CLSTN3-204ENST00000535313 NELFAQ9H3P2 528 aa14.08□□□□□ -0.16
CLSTN3-204ENST00000535313 A0A096LNT2 108 aa14.07□□□□□ -0.16
CLSTN3-204ENST00000535313 VSTM5A8MXK1 200 aa14.07□□□□□ -0.16
CLSTN3-204ENST00000535313 ZNF99A8MXY4 864 aaPredicted RBP14.07□□□□□ -0.16
CLSTN3-204ENST00000535313 B9A039 149 aa14.07□□□□□ -0.16
CLSTN3-204ENST00000535313 MS4A18H0YCH9 400 aa14.07□□□□□ -0.16
CLSTN3-204ENST00000535313 M0R3G1 203 aa14.07□□□□□ -0.16
CLSTN3-204ENST00000535313 PDE5AO76074 875 aa14.07□□□□□ -0.16
CLSTN3-204ENST00000535313 LY6HO94772 140 aa14.07□□□□□ -0.16
CLSTN3-204ENST00000535313 IGKV3-15P01624 115 aa14.07□□□□□ -0.16
CLSTN3-204ENST00000535313 OR4A8P0C604 315 aa14.07□□□□□ -0.16
CLSTN3-204ENST00000535313 CBR1P16152 277 aa14.07□□□□□ -0.16
CLSTN3-204ENST00000535313 CAPZA2P47755 286 aa14.07□□□□□ -0.16
CLSTN3-204ENST00000535313 PDLIM4P50479 330 aa14.07□□□□□ -0.16
CLSTN3-204ENST00000535313 CDH12P55289 794 aa14.07□□□□□ -0.16
CLSTN3-204ENST00000535313 MS4A18Q3C1V0 323 aa14.07□□□□□ -0.16
CLSTN3-204ENST00000535313 CARD17Q5XLA6 110 aa14.07□□□□□ -0.16
CLSTN3-204ENST00000535313 HIPK1Q86Z02 1210 aa14.07□□□□□ -0.16
CLSTN3-204ENST00000535313 TMEM123Q8N131 208 aa14.07□□□□□ -0.16
CLSTN3-204ENST00000535313 DPP10Q8N608 796 aa14.07□□□□□ -0.16
CLSTN3-204ENST00000535313 SLC41A3Q96GZ6 507 aa14.07□□□□□ -0.16
CLSTN3-204ENST00000535313 ANKRD27Q96NW4 1050 aa14.07□□□□□ -0.16
CLSTN3-204ENST00000535313 CGREF1Q99674 301 aa14.07□□□□□ -0.16
CLSTN3-204ENST00000535313 MCHR1Q99705 422 aa14.07□□□□□ -0.16
CLSTN3-204ENST00000535313 MDFIQ99750 246 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms