RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 RPS23P62266 143 aaKnown RBP6.97□□□□□ -1.29
CLIP1-206ENST00000535290 MRPS25P82663 173 aaKnown RBP6.97□□□□□ -1.29
CLIP1-206ENST00000535290 PLAURQ03405 335 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 LCP2Q13094 533 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 TP53BP2Q13625 1128 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 KIAA0040Q15053 153 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 CEACAM16Q2WEN9 425 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 C11orf91Q3C1V1 193 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 PRAMEF8Q5VWM4 474 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 PRAMEF7Q5VXH5 474 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 TMEM225Q6GV28 225 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 Q6YL49 198 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 ZNF620Q6ZNG0 422 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 CCDC36Q8IYA8 594 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 SPC24Q8NBT2 197 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 OR5D16Q8NGK9 328 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 OR10S1Q8NGN2 331 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 FAM76AQ8TAV0 307 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 PMM1Q92871 262 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 UPRTQ96BW1 309 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 DDIT4LQ96D03 193 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 ZNF764Q96H86 408 aaPredicted RBP6.97□□□□□ -1.29
CLIP1-206ENST00000535290 OR7D2Q96RA2 312 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 MRPL57Q9BQC6 102 aaKnown RBP6.97□□□□□ -1.29
CLIP1-206ENST00000535290 REEP4Q9H6H4 257 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 SAP30LQ9HAJ7 183 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 GPR35Q9HC97 309 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 DECR2Q9NUI1 292 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 DCAF16Q9NXF7 216 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 MKLN1Q9UL63 735 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 FAF1Q9UNN5 650 aaPredicted RBP6.97□□□□□ -1.29
CLIP1-206ENST00000535290 ZNF232Q9UNY5 417 aa6.97□□□□□ -1.29
CLIP1-206ENST00000535290 IGLV3-9A0A075B6K5 115 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 CLDN24A6NM45 220 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 AP3D1O14617 1153 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 EIF3HO15372 352 aaKnown RBP eCLIP6.96□□□□□ -1.3
CLIP1-206ENST00000535290 DHHO43323 396 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 TBX19O60806 448 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 UBOX5O94941 541 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 GPIP06744 558 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 MELTFP08582 738 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 SBK2P0C263 348 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 CD79AP11912 226 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 TACR3P29371 465 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 STX2P32856 288 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 SLC6A9P48067 706 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 GIPRP48546 466 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 CCT3P49368 545 aaKnown RBP6.96□□□□□ -1.3
CLIP1-206ENST00000535290 SERPINB8P50452 374 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 ERVS71-1P61550 626 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 RPS26P62854 115 aaKnown RBP6.96□□□□□ -1.3
CLIP1-206ENST00000535290 GALK2Q01415 458 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 NAB1Q13506 487 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 PDE7AQ13946 482 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 UAP1Q16222 522 aaPredicted RBP6.96□□□□□ -1.3
CLIP1-206ENST00000535290 IMPG1Q17R60 797 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 GSG1Q2KHT4 349 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 ZNF678Q5SXM1 525 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 FAM205BPQ63HN1 556 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 HMGN2P46Q86SG4 172 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 CMIPQ8IY22 773 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 KDM8Q8N371 416 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 CLHC1Q8NHS4 586 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 ZG16BQ96DA0 208 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 ELMOD3Q96FG2 381 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 TMEM237Q96Q45 408 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 MRPL46Q9H2W6 279 aaKnown RBP6.96□□□□□ -1.3
CLIP1-206ENST00000535290 NOX4Q9NPH5 578 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 ADPRHL2Q9NX46 363 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 BAIAP2L1Q9UHR4 511 aa6.96□□□□□ -1.3
CLIP1-206ENST00000535290 DNAH9Q9NYC9 4486 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 A8MXK9 166 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 ZNF99A8MXY4 864 aaPredicted RBP6.95□□□□□ -1.3
CLIP1-206ENST00000535290 K7EIL1 84 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 ZNF500O60304 480 aaPredicted RBP6.95□□□□□ -1.3
CLIP1-206ENST00000535290 GPR137BO60478 399 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 SCN2BO60939 215 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 SLC43A1O75387 559 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 STX11O75558 287 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 ENO1P06733 434 aaKnown RBP6.95□□□□□ -1.3
CLIP1-206ENST00000535290 CHRM4P08173 479 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 FAM157BP0CG42 384 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 PPIAL4GP0DN37 164 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 ZNF250P15622 560 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 MAGEA12P43365 314 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 HTR3AP46098 478 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 PTDSS1P48651 473 aaKnown RBP6.95□□□□□ -1.3
CLIP1-206ENST00000535290 POLR2HP52434 150 aaKnown RBP6.95□□□□□ -1.3
CLIP1-206ENST00000535290 CLDN17P56750 224 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 KLF3P57682 345 aaPredicted RBP6.95□□□□□ -1.3
CLIP1-206ENST00000535290 PAX2Q02962 417 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 GLO1Q04760 184 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 SPRNQ5BIV9 151 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 PHYHD1Q5SRE7 291 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 TEX35Q5T0J7 233 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 AP1ARQ63HQ0 302 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 RGS7BPQ6MZT1 257 aaPredicted RBP6.95□□□□□ -1.3
CLIP1-206ENST00000535290 Q6ZSV7 163 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 TRIM46Q7Z4K8 759 aa6.95□□□□□ -1.3
CLIP1-206ENST00000535290 PAQR4Q8N4S7 273 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms