RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 C3orf36Q3SXR2 165 aa20.34■□□□□ 0.85
YIF1A-213ENST00000534374 INTS11Q5TA45 600 aaKnown RBP20.34■□□□□ 0.85
YIF1A-213ENST00000534374 ANKRD16Q6P6B7 361 aa20.34■□□□□ 0.85
YIF1A-213ENST00000534374 LINC00114Q6XXX2 140 aa20.34■□□□□ 0.85
YIF1A-213ENST00000534374 B3GLCTQ6Y288 498 aa20.34■□□□□ 0.85
YIF1A-213ENST00000534374 FAM169BQ8N8A8 192 aa20.34■□□□□ 0.85
YIF1A-213ENST00000534374 OR10A6Q8NH74 314 aa20.34■□□□□ 0.85
YIF1A-213ENST00000534374 RNF217Q8TC41 542 aa20.34■□□□□ 0.85
YIF1A-213ENST00000534374 HS6ST2Q96MM7 605 aa20.34■□□□□ 0.85
YIF1A-213ENST00000534374 ALKBH3Q96Q83 286 aaPredicted RBP20.34■□□□□ 0.85
YIF1A-213ENST00000534374 MCHR1Q99705 422 aa20.34■□□□□ 0.85
YIF1A-213ENST00000534374 SH3GL1Q99961 368 aa20.34■□□□□ 0.85
YIF1A-213ENST00000534374 TMEM120AQ9BXJ8 343 aa20.34■□□□□ 0.85
YIF1A-213ENST00000534374 ATP23Q9Y6H3 246 aa20.34■□□□□ 0.85
YIF1A-213ENST00000534374 ARPC4-TTLL3A0A0A6YYG9 625 aa20.33■□□□□ 0.85
YIF1A-213ENST00000534374 FBP2O00757 339 aa20.33■□□□□ 0.85
YIF1A-213ENST00000534374 AKAP8O43823 692 aaKnown RBP20.33■□□□□ 0.85
YIF1A-213ENST00000534374 NPPAP01160 153 aa20.33■□□□□ 0.85
YIF1A-213ENST00000534374 BGLAPP02818 100 aa20.33■□□□□ 0.85
YIF1A-213ENST00000534374 TROVE2P10155 538 aaKnown RBP eCLIP20.33■□□□□ 0.85
YIF1A-213ENST00000534374 APOBEC3AP31941 199 aaPredicted RBP20.33■□□□□ 0.85
YIF1A-213ENST00000534374 PCGF2P35227 344 aa20.33■□□□□ 0.85
YIF1A-213ENST00000534374 ACVR1BP36896 505 aa20.33■□□□□ 0.85
YIF1A-213ENST00000534374 GZMMP51124 257 aa20.33■□□□□ 0.85
YIF1A-213ENST00000534374 UBE2NP61088 152 aaKnown RBP20.33■□□□□ 0.85
YIF1A-213ENST00000534374 ROR2Q01974 943 aaKnown RBP20.33■□□□□ 0.85
YIF1A-213ENST00000534374 COQ5Q5HYK3 327 aa20.33■□□□□ 0.85
YIF1A-213ENST00000534374 NANOGP8Q6NSW7 305 aa20.33■□□□□ 0.85
YIF1A-213ENST00000534374 GPR32P1Q8NGA4 272 aa20.33■□□□□ 0.85
YIF1A-213ENST00000534374 ASPNQ9BXN1 380 aa20.33■□□□□ 0.85
YIF1A-213ENST00000534374 NANOGQ9H9S0 305 aa20.33■□□□□ 0.85
YIF1A-213ENST00000534374 MRPL39Q9NYK5 338 aaKnown RBP20.33■□□□□ 0.85
YIF1A-213ENST00000534374 CRNNQ9UBG3 495 aaPredicted RBP20.33■□□□□ 0.85
YIF1A-213ENST00000534374 NDUFS7O75251 213 aa20.32■□□□□ 0.84
YIF1A-213ENST00000534374 BMP4P12644 408 aa20.32■□□□□ 0.84
YIF1A-213ENST00000534374 PTNP21246 168 aa20.32■□□□□ 0.84
YIF1A-213ENST00000534374 ARFIP2P53365 341 aa20.32■□□□□ 0.84
YIF1A-213ENST00000534374 TRMT5Q32P41 509 aaKnown RBP20.32■□□□□ 0.84
YIF1A-213ENST00000534374 CCDC80Q76M96 950 aa20.32■□□□□ 0.84
YIF1A-213ENST00000534374 UEVLDQ8IX04 471 aa20.32■□□□□ 0.84
YIF1A-213ENST00000534374 PIK3C3Q8NEB9 887 aa20.32■□□□□ 0.84
YIF1A-213ENST00000534374 OR6T1Q8NGN1 323 aa20.32■□□□□ 0.84
YIF1A-213ENST00000534374 RASSF5Q8WWW0 418 aa20.32■□□□□ 0.84
YIF1A-213ENST00000534374 LRR1Q96L50 414 aa20.32■□□□□ 0.84
YIF1A-213ENST00000534374 CACNG6Q9BXT2 260 aa20.32■□□□□ 0.84
YIF1A-213ENST00000534374 REG4Q9BYZ8 158 aa20.32■□□□□ 0.84
YIF1A-213ENST00000534374 GDF2Q9UK05 429 aaPredicted RBP20.32■□□□□ 0.84
YIF1A-213ENST00000534374 ARFGEF3Q5TH69 2177 aa20.31■□□□□ 0.84
YIF1A-213ENST00000534374 M0R3H8 397 aa20.31■□□□□ 0.84
YIF1A-213ENST00000534374 TRAF3IP2O43734 574 aaPredicted RBP20.31■□□□□ 0.84
YIF1A-213ENST00000534374 MT-ATP6P00846 226 aa20.31■□□□□ 0.84
YIF1A-213ENST00000534374 NQO1P15559 274 aaKnown RBP20.31■□□□□ 0.84
YIF1A-213ENST00000534374 CBLP22681 906 aa20.31■□□□□ 0.84
YIF1A-213ENST00000534374 VMACQ2NL98 169 aa20.31■□□□□ 0.84
YIF1A-213ENST00000534374 NHLRC1Q6VVB1 395 aa20.31■□□□□ 0.84
YIF1A-213ENST00000534374 GPR137CQ8N3F9 429 aa20.31■□□□□ 0.84
YIF1A-213ENST00000534374 LRRC58Q96CX6 371 aa20.31■□□□□ 0.84
YIF1A-213ENST00000534374 SLC38A2Q96QD8 506 aa20.31■□□□□ 0.84
YIF1A-213ENST00000534374 OR2M2Q96R28 347 aa20.31■□□□□ 0.84
YIF1A-213ENST00000534374 GPR35Q9HC97 309 aa20.31■□□□□ 0.84
YIF1A-213ENST00000534374 IGHV1-18A0A0C4DH31 117 aa20.3■□□□□ 0.84
YIF1A-213ENST00000534374 RNF223E7ERA6 249 aa20.3■□□□□ 0.84
YIF1A-213ENST00000534374 CHP2O43745 196 aa20.3■□□□□ 0.84
YIF1A-213ENST00000534374 OPN1SWP03999 348 aa20.3■□□□□ 0.84
YIF1A-213ENST00000534374 ARF1P84077 181 aaKnown RBP20.3■□□□□ 0.84
YIF1A-213ENST00000534374 IL1RL1Q01638 556 aa20.3■□□□□ 0.84
YIF1A-213ENST00000534374 CHRNB3Q05901 458 aa20.3■□□□□ 0.84
YIF1A-213ENST00000534374 PMS2P3Q13401 168 aa20.3■□□□□ 0.84
YIF1A-213ENST00000534374 RAB35Q15286 201 aa20.3■□□□□ 0.84
YIF1A-213ENST00000534374 ENTPD8Q5MY95 495 aa20.3■□□□□ 0.84
YIF1A-213ENST00000534374 PXKQ7Z7A4 578 aa20.3■□□□□ 0.84
YIF1A-213ENST00000534374 CCDC36Q8IYA8 594 aa20.3■□□□□ 0.84
YIF1A-213ENST00000534374 TMEM123Q8N131 208 aa20.3■□□□□ 0.84
YIF1A-213ENST00000534374 OR8J3Q8NGG0 315 aa20.3■□□□□ 0.84
YIF1A-213ENST00000534374 SLC26A7Q8TE54 656 aa20.3■□□□□ 0.84
YIF1A-213ENST00000534374 TAMM41Q96BW9 452 aa20.3■□□□□ 0.84
YIF1A-213ENST00000534374 MOGAT1Q96PD6 335 aa20.3■□□□□ 0.84
YIF1A-213ENST00000534374 KATNB1Q9BVA0 655 aa20.3■□□□□ 0.84
YIF1A-213ENST00000534374 PCDHAC1Q9H158 963 aa20.3■□□□□ 0.84
YIF1A-213ENST00000534374 NELFAQ9H3P2 528 aa20.3■□□□□ 0.84
YIF1A-213ENST00000534374 MOKQ9UQ07 419 aa20.3■□□□□ 0.84
YIF1A-213ENST00000534374 NOX1Q9Y5S8 564 aa20.3■□□□□ 0.84
YIF1A-213ENST00000534374 A0A096LPE4 126 aa20.29■□□□□ 0.84
YIF1A-213ENST00000534374 A0A1W2PPZ6 126 aa20.29■□□□□ 0.84
YIF1A-213ENST00000534374 ATP6V1G2-DDX39BF2Z307 99 aa20.29■□□□□ 0.84
YIF1A-213ENST00000534374 H7C417 338 aa20.29■□□□□ 0.84
YIF1A-213ENST00000534374 PLPP3O14495 311 aa20.29■□□□□ 0.84
YIF1A-213ENST00000534374 HPRP00739 348 aa20.29■□□□□ 0.84
YIF1A-213ENST00000534374 IGLV1-44P01699 117 aa20.29■□□□□ 0.84
YIF1A-213ENST00000534374 CRYAAP02489 173 aa20.29■□□□□ 0.84
YIF1A-213ENST00000534374 CD247P20963 164 aa20.29■□□□□ 0.84
YIF1A-213ENST00000534374 DSCR9P59020 149 aa20.29■□□□□ 0.84
YIF1A-213ENST00000534374 PUDPQ08623 228 aa20.29■□□□□ 0.84
YIF1A-213ENST00000534374 KLF10Q13118 480 aa20.29■□□□□ 0.84
YIF1A-213ENST00000534374 NPTX1Q15818 432 aa20.29■□□□□ 0.84
YIF1A-213ENST00000534374 CALHM3Q86XJ0 350 aa20.29■□□□□ 0.84
YIF1A-213ENST00000534374 C20orf196Q8IYI0 205 aa20.29■□□□□ 0.84
YIF1A-213ENST00000534374 MPP4Q96JB8 637 aa20.29■□□□□ 0.84
YIF1A-213ENST00000534374 KCNS3Q9BQ31 491 aa20.29■□□□□ 0.84
YIF1A-213ENST00000534374 ECSITQ9BQ95 431 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms