RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 MNAT1P51948 309 aa16.58■□□□□ 0.24
SSH3-209ENST00000532600 MXRA7P84157 204 aa16.58■□□□□ 0.24
SSH3-209ENST00000532600 CLEC12BQ2HXU8 276 aa16.58■□□□□ 0.24
SSH3-209ENST00000532600 C11orf71Q6IPW1 123 aa16.58■□□□□ 0.24
SSH3-209ENST00000532600 TMEM108Q6UXF1 575 aa16.58■□□□□ 0.24
SSH3-209ENST00000532600 PATL1Q86TB9 770 aaKnown RBP16.58■□□□□ 0.24
SSH3-209ENST00000532600 PIAS4Q8N2W9 510 aaPredicted RBP16.58■□□□□ 0.24
SSH3-209ENST00000532600 KDM8Q8N371 416 aa16.58■□□□□ 0.24
SSH3-209ENST00000532600 MAPK1IP1LQ8NDC0 245 aa16.58■□□□□ 0.24
SSH3-209ENST00000532600 C1orf162Q8NEQ5 155 aaPredicted RBP16.58■□□□□ 0.24
SSH3-209ENST00000532600 OR4D11Q8NGI4 311 aa16.58■□□□□ 0.24
SSH3-209ENST00000532600 MFSD8Q8NHS3 518 aa16.58■□□□□ 0.24
SSH3-209ENST00000532600 SLC7A6OSQ96CW6 309 aaPredicted RBP16.58■□□□□ 0.24
SSH3-209ENST00000532600 BOD1Q96IK1 185 aa16.58■□□□□ 0.24
SSH3-209ENST00000532600 KCTD14Q9BQ13 255 aaPredicted RBP16.58■□□□□ 0.24
SSH3-209ENST00000532600 TAPBPLQ9BX59 468 aa16.58■□□□□ 0.24
SSH3-209ENST00000532600 B3GAT1Q9P2W7 334 aa16.58■□□□□ 0.24
SSH3-209ENST00000532600 B3GALT5Q9Y2C3 310 aa16.58■□□□□ 0.24
SSH3-209ENST00000532600 ANK3Q12955 4377 aaKnown RBP16.58■□□□□ 0.24
SSH3-209ENST00000532600 A0A1B0GWA3 101 aa16.57■□□□□ 0.24
SSH3-209ENST00000532600 SERPINB7O75635 380 aa16.57■□□□□ 0.24
SSH3-209ENST00000532600 PNMTP11086 282 aa16.57■□□□□ 0.24
SSH3-209ENST00000532600 NCK1P16333 377 aa16.57■□□□□ 0.24
SSH3-209ENST00000532600 PTAFRP25105 342 aa16.57■□□□□ 0.24
SSH3-209ENST00000532600 KDELR2P33947 212 aa16.57■□□□□ 0.24
SSH3-209ENST00000532600 MSX2P35548 267 aaPredicted RBP16.57■□□□□ 0.24
SSH3-209ENST00000532600 RPS5P46782 204 aaKnown RBP16.57■□□□□ 0.24
SSH3-209ENST00000532600 BNIP1Q12981 228 aa16.57■□□□□ 0.24
SSH3-209ENST00000532600 FXNQ16595 210 aa16.57■□□□□ 0.24
SSH3-209ENST00000532600 HIKESHIQ53FT3 197 aa16.57■□□□□ 0.24
SSH3-209ENST00000532600 INTS11Q5TA45 600 aaKnown RBP16.57■□□□□ 0.24
SSH3-209ENST00000532600 TMEM225Q6GV28 225 aa16.57■□□□□ 0.24
SSH3-209ENST00000532600 C17orf78Q8N4C9 275 aa16.57■□□□□ 0.24
SSH3-209ENST00000532600 LSMEM1Q8N8F7 131 aa16.57■□□□□ 0.24
SSH3-209ENST00000532600 TAAR8Q969N4 342 aa16.57■□□□□ 0.24
SSH3-209ENST00000532600 GTPBP3Q969Y2 492 aaKnown RBP16.57■□□□□ 0.24
SSH3-209ENST00000532600 SPATA5L1Q9BVQ7 753 aa16.57■□□□□ 0.24
SSH3-209ENST00000532600 ARMC7Q9H6L4 198 aa16.57■□□□□ 0.24
SSH3-209ENST00000532600 EGFL7Q9UHF1 273 aa16.57■□□□□ 0.24
SSH3-209ENST00000532600 RNF223E7ERA6 249 aa16.56■□□□□ 0.24
SSH3-209ENST00000532600 CXCR6O00574 342 aa16.56■□□□□ 0.24
SSH3-209ENST00000532600 UPK3AO75631 287 aa16.56■□□□□ 0.24
SSH3-209ENST00000532600 HSD17B1P14061 328 aa16.56■□□□□ 0.24
SSH3-209ENST00000532600 TTKP33981 857 aa16.56■□□□□ 0.24
SSH3-209ENST00000532600 NPTX1Q15818 432 aa16.56■□□□□ 0.24
SSH3-209ENST00000532600 KLHL17Q6TDP4 642 aa16.56■□□□□ 0.24
SSH3-209ENST00000532600 POMGNT2Q8NAT1 580 aa16.56■□□□□ 0.24
SSH3-209ENST00000532600 SLC25A36Q96CQ1 311 aa16.56■□□□□ 0.24
SSH3-209ENST00000532600 TRMT61AQ96FX7 289 aaKnown RBP16.56■□□□□ 0.24
SSH3-209ENST00000532600 RADILQ96JH8 1075 aa16.56■□□□□ 0.24
SSH3-209ENST00000532600 ARHGDIGQ99819 225 aa16.56■□□□□ 0.24
SSH3-209ENST00000532600 DHRS9Q9BPW9 319 aa16.56■□□□□ 0.24
SSH3-209ENST00000532600 NELFAQ9H3P2 528 aa16.56■□□□□ 0.24
SSH3-209ENST00000532600 C12orf10Q9HB07 376 aa16.56■□□□□ 0.24
SSH3-209ENST00000532600 CACYBPQ9HB71 228 aaKnown RBP16.56■□□□□ 0.24
SSH3-209ENST00000532600 NDE1Q9NXR1 346 aa16.56■□□□□ 0.24
SSH3-209ENST00000532600 MGAT4BQ9UQ53 548 aa16.56■□□□□ 0.24
SSH3-209ENST00000532600 HIVEP2P31629 2446 aa16.55■□□□□ 0.24
SSH3-209ENST00000532600 ABCA2Q9BZC7 2435 aa16.55■□□□□ 0.24
SSH3-209ENST00000532600 M0R3H8 397 aa16.55■□□□□ 0.24
SSH3-209ENST00000532600 ZNF432O94892 652 aa16.55■□□□□ 0.24
SSH3-209ENST00000532600 VAMP5O95183 116 aa16.55■□□□□ 0.24
SSH3-209ENST00000532600 AHSA1O95433 338 aa16.55■□□□□ 0.24
SSH3-209ENST00000532600 LGI1O95970 557 aa16.55■□□□□ 0.24
SSH3-209ENST00000532600 CDH2P19022 906 aaPredicted RBP16.55■□□□□ 0.24
SSH3-209ENST00000532600 TCN1P20061 433 aaPredicted RBP16.55■□□□□ 0.24
SSH3-209ENST00000532600 TNFRSF1BP20333 461 aa16.55■□□□□ 0.24
SSH3-209ENST00000532600 NRF1Q16656 503 aa16.55■□□□□ 0.24
SSH3-209ENST00000532600 LRRC23Q53EV4 343 aaPredicted RBP16.55■□□□□ 0.24
SSH3-209ENST00000532600 CYBRD1Q53TN4 286 aa16.55■□□□□ 0.24
SSH3-209ENST00000532600 SAMD4BQ5PRF9 694 aaKnown RBP16.55■□□□□ 0.24
SSH3-209ENST00000532600 SLC22A25Q6T423 547 aa16.55■□□□□ 0.24
SSH3-209ENST00000532600 RBM45Q8IUH3 476 aaKnown RBP16.55■□□□□ 0.24
SSH3-209ENST00000532600 OR1K1Q8NGR3 316 aa16.55■□□□□ 0.24
SSH3-209ENST00000532600 CLPTM1LQ96KA5 538 aa16.55■□□□□ 0.24
SSH3-209ENST00000532600 ALKBH3Q96Q83 286 aaPredicted RBP16.55■□□□□ 0.24
SSH3-209ENST00000532600 RASD1Q9Y272 281 aa16.55■□□□□ 0.24
SSH3-209ENST00000532600 AMDHD2Q9Y303 409 aa16.55■□□□□ 0.24
SSH3-209ENST00000532600 JMJD1CQ15652 2540 aa16.55■□□□□ 0.24
SSH3-209ENST00000532600 ALPK2Q86TB3 2170 aa16.54■□□□□ 0.24
SSH3-209ENST00000532600 HEATR1Q9H583 2144 aaKnown RBP16.54■□□□□ 0.24
SSH3-209ENST00000532600 ELOA3DA6NLF2 546 aaPredicted RBP16.54■□□□□ 0.24
SSH3-209ENST00000532600 INAFM1C9JVW0 142 aa16.54■□□□□ 0.24
SSH3-209ENST00000532600 PCSK6P29122 969 aa16.54■□□□□ 0.24
SSH3-209ENST00000532600 ETFDHQ16134 617 aa16.54■□□□□ 0.24
SSH3-209ENST00000532600 ELOA3BQ3SY89 546 aa16.54■□□□□ 0.24
SSH3-209ENST00000532600 NIPAL3Q6P499 406 aa16.54■□□□□ 0.24
SSH3-209ENST00000532600 TSPYL5Q86VY4 417 aaPredicted RBP16.54■□□□□ 0.24
SSH3-209ENST00000532600 PRIMA1Q86XR5 153 aa16.54■□□□□ 0.24
SSH3-209ENST00000532600 WDFY1Q8IWB7 410 aa16.54■□□□□ 0.24
SSH3-209ENST00000532600 ELOA3Q8NG57 546 aa16.54■□□□□ 0.24
SSH3-209ENST00000532600 BCL2L2Q92843 193 aaPredicted RBP16.54■□□□□ 0.24
SSH3-209ENST00000532600 PCDHAC1Q9H158 963 aa16.54■□□□□ 0.24
SSH3-209ENST00000532600 C1orf21Q9H246 121 aa16.54■□□□□ 0.24
SSH3-209ENST00000532600 A0A0B4J2E0 115 aa16.53■□□□□ 0.24
SSH3-209ENST00000532600 A0A1B0GX12 115 aa16.53■□□□□ 0.24
SSH3-209ENST00000532600 ATP6V1G2-DDX39BF2Z307 99 aa16.53■□□□□ 0.24
SSH3-209ENST00000532600 M0R082 166 aa16.53■□□□□ 0.24
SSH3-209ENST00000532600 GSTA4O15217 222 aa16.53■□□□□ 0.24
SSH3-209ENST00000532600 PDE5AO76074 875 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms