RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 B9A039 149 aa14.62□□□□□ -0.07
CPSF1-207ENST00000531727 AKAP8O43823 692 aaKnown RBP14.62□□□□□ -0.07
CPSF1-207ENST00000531727 TPST1O60507 370 aa14.62□□□□□ -0.07
CPSF1-207ENST00000531727 IGHV4-31P0DP07 118 aa14.62□□□□□ -0.07
CPSF1-207ENST00000531727 PDLIM4P50479 330 aa14.62□□□□□ -0.07
CPSF1-207ENST00000531727 ADIPOQQ15848 244 aa14.62□□□□□ -0.07
CPSF1-207ENST00000531727 GLIPR1L2Q4G1C9 344 aa14.62□□□□□ -0.07
CPSF1-207ENST00000531727 ARFGEF3Q5TH69 2177 aa14.62□□□□□ -0.07
CPSF1-207ENST00000531727 CYB5R2Q6BCY4 276 aa14.62□□□□□ -0.07
CPSF1-207ENST00000531727 ULK3Q6PHR2 472 aa14.62□□□□□ -0.07
CPSF1-207ENST00000531727 H1FNTQ75WM6 255 aaPredicted RBP14.62□□□□□ -0.07
CPSF1-207ENST00000531727 SLC46A3Q7Z3Q1 461 aa14.62□□□□□ -0.07
CPSF1-207ENST00000531727 TMEM123Q8N131 208 aa14.62□□□□□ -0.07
CPSF1-207ENST00000531727 GPR137CQ8N3F9 429 aa14.62□□□□□ -0.07
CPSF1-207ENST00000531727 PIK3C3Q8NEB9 887 aa14.62□□□□□ -0.07
CPSF1-207ENST00000531727 OR4F15Q8NGB8 312 aa14.62□□□□□ -0.07
CPSF1-207ENST00000531727 SLC47A1Q96FL8 570 aa14.62□□□□□ -0.07
CPSF1-207ENST00000531727 OR2M2Q96R28 347 aa14.62□□□□□ -0.07
CPSF1-207ENST00000531727 KCNK17Q96T54 332 aa14.62□□□□□ -0.07
CPSF1-207ENST00000531727 PRR14Q9BWN1 585 aa14.62□□□□□ -0.07
CPSF1-207ENST00000531727 IKZF5Q9H5V7 419 aa14.62□□□□□ -0.07
CPSF1-207ENST00000531727 TMEM38AQ9H6F2 299 aa14.62□□□□□ -0.07
CPSF1-207ENST00000531727 SEC61A2Q9H9S3 476 aa14.62□□□□□ -0.07
CPSF1-207ENST00000531727 CRLF2Q9HC73 371 aa14.62□□□□□ -0.07
CPSF1-207ENST00000531727 TMEM160Q9NX00 188 aa14.62□□□□□ -0.07
CPSF1-207ENST00000531727 CDC42EP3Q9UKI2 254 aa14.62□□□□□ -0.07
CPSF1-207ENST00000531727 CORO2BQ9UQ03 480 aa14.62□□□□□ -0.07
CPSF1-207ENST00000531727 ALPK2Q86TB3 2170 aa14.61□□□□□ -0.07
CPSF1-207ENST00000531727 PRORSD1PA6NEY8 169 aa14.61□□□□□ -0.07
CPSF1-207ENST00000531727 NDUFS8O00217 210 aa14.61□□□□□ -0.07
CPSF1-207ENST00000531727 TRAF3IP2O43734 574 aaPredicted RBP14.61□□□□□ -0.07
CPSF1-207ENST00000531727 OR4A8P0C604 315 aa14.61□□□□□ -0.07
CPSF1-207ENST00000531727 CBR1P16152 277 aa14.61□□□□□ -0.07
CPSF1-207ENST00000531727 GPX2P18283 190 aa14.61□□□□□ -0.07
CPSF1-207ENST00000531727 CALCRP30988 508 aa14.61□□□□□ -0.07
CPSF1-207ENST00000531727 ATP4BP51164 291 aa14.61□□□□□ -0.07
CPSF1-207ENST00000531727 AQP5P55064 265 aa14.61□□□□□ -0.07
CPSF1-207ENST00000531727 RGS8P57771 180 aaPredicted RBP14.61□□□□□ -0.07
CPSF1-207ENST00000531727 NCALDP61601 193 aa14.61□□□□□ -0.07
CPSF1-207ENST00000531727 LSM11P83369 360 aaKnown RBP eCLIP14.61□□□□□ -0.078e-7■■■□□ 17
CPSF1-207ENST00000531727 IL1RL1Q01638 556 aa14.61□□□□□ -0.07
CPSF1-207ENST00000531727 SCARB2Q14108 478 aa14.61□□□□□ -0.07
CPSF1-207ENST00000531727 MFSD13AQ14CX5 517 aa14.61□□□□□ -0.07
CPSF1-207ENST00000531727 EFNB3Q15768 340 aa14.61□□□□□ -0.07
CPSF1-207ENST00000531727 CEACAM16Q2WEN9 425 aa14.61□□□□□ -0.07
CPSF1-207ENST00000531727 VHLLQ6RSH7 139 aa14.61□□□□□ -0.07
CPSF1-207ENST00000531727 MYPOPQ86VE0 399 aaPredicted RBP14.61□□□□□ -0.07
CPSF1-207ENST00000531727 ANKS4BQ8N8V4 417 aa14.61□□□□□ -0.07
CPSF1-207ENST00000531727 NUP37Q8NFH4 326 aa14.61□□□□□ -0.07
CPSF1-207ENST00000531727 OR6S1Q8NH40 331 aa14.61□□□□□ -0.07
CPSF1-207ENST00000531727 ZNF837Q96EG3 531 aaPredicted RBP14.61□□□□□ -0.07
CPSF1-207ENST00000531727 ZNF607Q96SK3 696 aa14.61□□□□□ -0.07
CPSF1-207ENST00000531727 VRK1Q99986 396 aaPredicted RBP14.61□□□□□ -0.07
CPSF1-207ENST00000531727 SELENONQ9NZV5 590 aa14.61□□□□□ -0.07
CPSF1-207ENST00000531727 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.61□□□□□ -0.07
CPSF1-207ENST00000531727 A0A087WUJ7 227 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 A0A0B4J2E0 115 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 A0A1B0GX12 115 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 EVPLLA8MZ36 301 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 MS4A18H0YCH9 400 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 CELA3BP08861 270 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 FAM157CP0CG43 387 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 ZNF16P17020 682 aaPredicted RBP14.6□□□□□ -0.07
CPSF1-207ENST00000531727 CBLP22681 906 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 SLC6A2P23975 617 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 NR4A2P43354 598 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 PPOXP50336 477 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 HGFACQ04756 655 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 OR1Q1Q15612 314 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 ADRM1Q16186 407 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 MS4A18Q3C1V0 323 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 AGKQ53H12 422 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 UEVLDQ8IX04 471 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 HIPK4Q8NE63 616 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 BHLHE22Q8NFJ8 381 aaPredicted RBP14.6□□□□□ -0.07
CPSF1-207ENST00000531727 RNF217Q8TC41 542 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 SLC41A3Q96GZ6 507 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 EPYCQ99645 322 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 PIMREGQ9BSJ6 248 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 PLK3Q9H4B4 646 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 ZNF442Q9H7R0 627 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 EVA1AQ9H8M9 152 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 TMEM27Q9HBJ8 222 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 MYOZ1Q9NP98 299 aaPredicted RBP14.6□□□□□ -0.07
CPSF1-207ENST00000531727 SLC13A4Q9UKG4 626 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 CORINQ9Y5Q5 1042 aa14.6□□□□□ -0.07
CPSF1-207ENST00000531727 LOC390937A0A1W2PQ73 354 aa14.59□□□□□ -0.07
CPSF1-207ENST00000531727 ZNF503-AS2A6NEH8 195 aa14.59□□□□□ -0.07
CPSF1-207ENST00000531727 RNF212BA8MTL3 300 aa14.59□□□□□ -0.07
CPSF1-207ENST00000531727 ZNF99A8MXY4 864 aaPredicted RBP14.59□□□□□ -0.07
CPSF1-207ENST00000531727 SERPINB7O75635 380 aa14.59□□□□□ -0.07
CPSF1-207ENST00000531727 HPRP00739 348 aa14.59□□□□□ -0.07
CPSF1-207ENST00000531727 BGLAPP02818 100 aa14.59□□□□□ -0.07
CPSF1-207ENST00000531727 NQO1P15559 274 aaKnown RBP14.59□□□□□ -0.07
CPSF1-207ENST00000531727 AQP1P29972 269 aa14.59□□□□□ -0.07
CPSF1-207ENST00000531727 ARR3P36575 388 aa14.59□□□□□ -0.07
CPSF1-207ENST00000531727 IDH3GP51553 393 aaPredicted RBP14.59□□□□□ -0.07
CPSF1-207ENST00000531727 GGTLC2Q14390 218 aa14.59□□□□□ -0.07
CPSF1-207ENST00000531727 SQLEQ14534 574 aa14.59□□□□□ -0.07
CPSF1-207ENST00000531727 RANBP3LQ86VV4 465 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms