RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 S100A13Q99584 98 aa5.09□□□□□ -1.59
CD44-231ENST00000531110 REEP2Q9BRK0 252 aa5.09□□□□□ -1.59
CD44-231ENST00000531110 MSTO1Q9BUK6 570 aa5.09□□□□□ -1.59
CD44-231ENST00000531110 FAM234AQ9H0X4 552 aa5.09□□□□□ -1.59
CD44-231ENST00000531110 PTGES2Q9H7Z7 377 aa5.09□□□□□ -1.59
CD44-231ENST00000531110 FKRPQ9H9S5 495 aa5.09□□□□□ -1.59
CD44-231ENST00000531110 IL1RL2Q9HB29 575 aa5.09□□□□□ -1.59
CD44-231ENST00000531110 NOX3Q9HBY0 568 aa5.09□□□□□ -1.59
CD44-231ENST00000531110 AGPAT4Q9NRZ5 378 aa5.09□□□□□ -1.59
CD44-231ENST00000531110 GPR173Q9NS66 373 aa5.09□□□□□ -1.59
CD44-231ENST00000531110 ZCCHC3Q9NUD5 404 aaKnown RBP5.09□□□□□ -1.59
CD44-231ENST00000531110 FAM118AQ9NWS6 357 aa5.09□□□□□ -1.59
CD44-231ENST00000531110 MIOSQ9NXC5 875 aa5.09□□□□□ -1.59
CD44-231ENST00000531110 POMT2Q9UKY4 750 aa5.09□□□□□ -1.59
CD44-231ENST00000531110 DHDHQ9UQ10 334 aa5.09□□□□□ -1.59
CD44-231ENST00000531110 PDE10AQ9Y233 779 aa5.09□□□□□ -1.59
CD44-231ENST00000531110 POFUT2Q9Y2G5 429 aa5.09□□□□□ -1.59
CD44-231ENST00000531110 ZFP30Q9Y2G7 519 aa5.09□□□□□ -1.59
CD44-231ENST00000531110 TMED3Q9Y3Q3 217 aa5.09□□□□□ -1.59
CD44-231ENST00000531110 PRSS21Q9Y6M0 314 aa5.09□□□□□ -1.59
CD44-231ENST00000531110 ZNF638Q14966 1978 aaKnown RBP5.09□□□□□ -1.6
CD44-231ENST00000531110 A0A087WUJ7 227 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 A0A1B0GUH1 482 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.08□□□□□ -1.6
CD44-231ENST00000531110 EXOC1LA0A1B0GW35 172 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 URADA6NGE7 173 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 FAM74A7A6NL05 159 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 YDJCA8MPS7 323 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 TRIM49D1C9J1S8 452 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 C5orf58C9J3I9 102 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 K7ERI5 159 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 PDXKO00764 312 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 PRRG1O14668 218 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 ANKRD28O15084 1053 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 INPP4BO15327 924 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 CHADO15335 359 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 FLRT2O43155 660 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 TGOLN2O43493 480 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 HPGDSO60760 199 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 MTX2O75431 263 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 TNFSF15O95150 251 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 HPP00738 406 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 EGFP01133 1207 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 APOC3P02656 99 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 SRPRAP08240 638 aaKnown RBP5.08□□□□□ -1.6
CD44-231ENST00000531110 HIST1H2AGP0C0S8 130 aaPredicted RBP5.08□□□□□ -1.6
CD44-231ENST00000531110 NCF1P14598 390 aaPredicted RBP5.08□□□□□ -1.6
CD44-231ENST00000531110 IL7RP16871 459 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 HIST1H2ADP20671 130 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 ZNF10P21506 573 aaPredicted RBP5.08□□□□□ -1.6
CD44-231ENST00000531110 FGF7P21781 194 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 SLC2A5P22732 501 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 FASP25445 335 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 KLRC2P26717 231 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 LCN1P31025 176 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 COILP38432 576 aaPredicted RBP5.08□□□□□ -1.6
CD44-231ENST00000531110 IFNGR2P38484 337 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 MMP12P39900 470 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 EVX1P49640 407 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 DLX5P56178 289 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 TAS2R38P59533 333 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 FABP9Q0Z7S8 132 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 NPRL3Q12980 569 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 TRA2AQ13595 282 aaKnown RBP eCLIP5.08□□□□□ -1.6
CD44-231ENST00000531110 RUNX2Q13950 521 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 DPYSL3Q14195 570 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 HMGN3Q15651 99 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 RPE65Q16518 533 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 PRTGQ2VWP7 1150 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 SYTL3Q4VX76 610 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 FAM74A3Q4VXF1 159 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 PYCR3Q53H96 274 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 ZRANB3Q5FWF4 1079 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 ATG9BQ674R7 924 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 HIST2H2AA3Q6FI13 130 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 DPY19L2P2Q6ZN68 376 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 GCNT7Q6ZNI0 430 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 MTSS1LQ765P7 747 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 FAM220AQ7Z4H9 259 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 RBM23Q86U06 439 aaKnown RBP5.08□□□□□ -1.6
CD44-231ENST00000531110 KMT5CQ86Y97 462 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 WDFY1Q8IWB7 410 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 DCUN1D3Q8IWE4 304 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 SLC22A15Q8IZD6 547 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 GATSQ8NAP1 163 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 OR5M9Q8NGP3 310 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 CXorf40AQ8TE69 158 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 CA5BP1Q8WTZ4 195 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 ORAOV1Q8WV07 137 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 C11orf40Q8WZ69 217 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 SMPDL3AQ92484 453 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 GHSRQ92847 366 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 RAB1CQ92928 201 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 CCDC126Q96EE4 140 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 MOCOSQ96EN8 888 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 RNFT2Q96EX2 444 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 SMARCD1Q96GM5 515 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 ZNF419Q96HQ0 510 aaPredicted RBP5.08□□□□□ -1.6
CD44-231ENST00000531110 OR2V2Q96R30 315 aa5.08□□□□□ -1.6
CD44-231ENST00000531110 RNF2Q99496 336 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms