RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 ZNF417Q8TAU3 575 aa13.72□□□□□ -0.21
CPSF1-205ENST00000531042 LRRC8CQ8TDW0 803 aa13.72□□□□□ -0.21
CPSF1-205ENST00000531042 SORCS2Q96PQ0 1159 aa13.72□□□□□ -0.21
CPSF1-205ENST00000531042 ZNF587Q96SQ5 575 aaPredicted RBP13.72□□□□□ -0.21
CPSF1-205ENST00000531042 GPR35Q9HC97 309 aa13.72□□□□□ -0.21
CPSF1-205ENST00000531042 FKBP7Q9Y680 259 aa13.72□□□□□ -0.21
CPSF1-205ENST00000531042 VWC2LB2RUY7 222 aa13.71□□□□□ -0.21
CPSF1-205ENST00000531042 B9A039 149 aa13.71□□□□□ -0.21
CPSF1-205ENST00000531042 PDE5AO76074 875 aa13.71□□□□□ -0.21
CPSF1-205ENST00000531042 GPX2P18283 190 aa13.71□□□□□ -0.21
CPSF1-205ENST00000531042 CALCRP30988 508 aa13.71□□□□□ -0.21
CPSF1-205ENST00000531042 PDLIM4P50479 330 aa13.71□□□□□ -0.21
CPSF1-205ENST00000531042 C1DQ13901 141 aaKnown RBP13.71□□□□□ -0.21
CPSF1-205ENST00000531042 ADIPOQQ15848 244 aa13.71□□□□□ -0.21
CPSF1-205ENST00000531042 CEACAM16Q2WEN9 425 aa13.71□□□□□ -0.21
CPSF1-205ENST00000531042 FAM91A1Q658Y4 838 aa13.71□□□□□ -0.21
CPSF1-205ENST00000531042 CYB5R2Q6BCY4 276 aa13.71□□□□□ -0.21
CPSF1-205ENST00000531042 GPR137CQ8N3F9 429 aa13.71□□□□□ -0.21
CPSF1-205ENST00000531042 ADPRHL1Q8NDY3 354 aa13.71□□□□□ -0.21
CPSF1-205ENST00000531042 OR4F15Q8NGB8 312 aa13.71□□□□□ -0.21
CPSF1-205ENST00000531042 ZNF837Q96EG3 531 aaPredicted RBP13.71□□□□□ -0.21
CPSF1-205ENST00000531042 SLC47A1Q96FL8 570 aa13.71□□□□□ -0.21
CPSF1-205ENST00000531042 OR2M2Q96R28 347 aa13.71□□□□□ -0.21
CPSF1-205ENST00000531042 KCNK17Q96T54 332 aa13.71□□□□□ -0.21
CPSF1-205ENST00000531042 IKZF5Q9H5V7 419 aa13.71□□□□□ -0.21
CPSF1-205ENST00000531042 TMEM38AQ9H6F2 299 aa13.71□□□□□ -0.21
CPSF1-205ENST00000531042 SEC61A2Q9H9S3 476 aa13.71□□□□□ -0.21
CPSF1-205ENST00000531042 TMEM160Q9NX00 188 aa13.71□□□□□ -0.21
CPSF1-205ENST00000531042 KLHL14Q9P2G3 628 aa13.71□□□□□ -0.21
CPSF1-205ENST00000531042 TESQ9UGI8 421 aaKnown RBP13.71□□□□□ -0.21
CPSF1-205ENST00000531042 CDC42EP3Q9UKI2 254 aa13.71□□□□□ -0.21
CPSF1-205ENST00000531042 A0A087WUJ7 227 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 PRORSD1PA6NEY8 169 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 MS4A18H0YCH9 400 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 NDUFS8O00217 210 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 TRAF3IP2O43734 574 aaPredicted RBP13.7□□□□□ -0.22
CPSF1-205ENST00000531042 AKAP8O43823 692 aaKnown RBP13.7□□□□□ -0.22
CPSF1-205ENST00000531042 CELA3BP08861 270 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 OR4A8P0C604 315 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 FAM157CP0CG43 387 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 IGHV4-31P0DP07 118 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 CBR1P16152 277 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 CBLP22681 906 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 SLC6A2P23975 617 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 ATP4BP51164 291 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 AQP5P55064 265 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 LSM11P83369 360 aaKnown RBP eCLIP13.7□□□□□ -0.226e-10■□□□□ 8.2
CPSF1-205ENST00000531042 HGFACQ04756 655 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 SCARB2Q14108 478 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 MFSD13AQ14CX5 517 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 EFNB3Q15768 340 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 ADRM1Q16186 407 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 MS4A18Q3C1V0 323 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 AGKQ53H12 422 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 VHLLQ6RSH7 139 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 SLC46A3Q7Z3Q1 461 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 MYPOPQ86VE0 399 aaPredicted RBP13.7□□□□□ -0.22
CPSF1-205ENST00000531042 TMEM123Q8N131 208 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 ANKS4BQ8N8V4 417 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 PIK3C3Q8NEB9 887 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 NUP37Q8NFH4 326 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 OR6S1Q8NH40 331 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 SLC41A3Q96GZ6 507 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 ZNF607Q96SK3 696 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 VRK1Q99986 396 aaPredicted RBP13.7□□□□□ -0.22
CPSF1-205ENST00000531042 PLK3Q9H4B4 646 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 CRLF2Q9HC73 371 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 CORO2BQ9UQ03 480 aa13.7□□□□□ -0.22
CPSF1-205ENST00000531042 A0A0B4J2E0 115 aa13.69□□□□□ -0.22
CPSF1-205ENST00000531042 A0A1B0GX12 115 aa13.69□□□□□ -0.22
CPSF1-205ENST00000531042 ZNF503-AS2A6NEH8 195 aa13.69□□□□□ -0.22
CPSF1-205ENST00000531042 EVPLLA8MZ36 301 aa13.69□□□□□ -0.22
CPSF1-205ENST00000531042 TPST2O60704 377 aa13.69□□□□□ -0.22
CPSF1-205ENST00000531042 HPRP00739 348 aa13.69□□□□□ -0.22
CPSF1-205ENST00000531042 BGLAPP02818 100 aa13.69□□□□□ -0.22
CPSF1-205ENST00000531042 ZNF16P17020 682 aaPredicted RBP13.69□□□□□ -0.22
CPSF1-205ENST00000531042 NR4A2P43354 598 aa13.69□□□□□ -0.22
CPSF1-205ENST00000531042 RGS8P57771 180 aaPredicted RBP13.69□□□□□ -0.22
CPSF1-205ENST00000531042 NCALDP61601 193 aa13.69□□□□□ -0.22
CPSF1-205ENST00000531042 IL1RL1Q01638 556 aa13.69□□□□□ -0.22
CPSF1-205ENST00000531042 OR1Q1Q15612 314 aa13.69□□□□□ -0.22
CPSF1-205ENST00000531042 PHYHD1Q5SRE7 291 aa13.69□□□□□ -0.22
CPSF1-205ENST00000531042 DLEU7Q6UYE1 221 aa13.69□□□□□ -0.22
CPSF1-205ENST00000531042 UEVLDQ8IX04 471 aa13.69□□□□□ -0.22
CPSF1-205ENST00000531042 BHLHE22Q8NFJ8 381 aaPredicted RBP13.69□□□□□ -0.22
CPSF1-205ENST00000531042 RNF217Q8TC41 542 aa13.69□□□□□ -0.22
CPSF1-205ENST00000531042 EPYCQ99645 322 aa13.69□□□□□ -0.22
CPSF1-205ENST00000531042 WFDC6Q9BQY6 131 aa13.69□□□□□ -0.22
CPSF1-205ENST00000531042 PIMREGQ9BSJ6 248 aa13.69□□□□□ -0.22
CPSF1-205ENST00000531042 TMEM27Q9HBJ8 222 aa13.69□□□□□ -0.22
CPSF1-205ENST00000531042 SELENONQ9NZV5 590 aa13.69□□□□□ -0.22
CPSF1-205ENST00000531042 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.69□□□□□ -0.22
CPSF1-205ENST00000531042 CORINQ9Y5Q5 1042 aa13.69□□□□□ -0.22
CPSF1-205ENST00000531042 LOC390937A0A1W2PQ73 354 aa13.68□□□□□ -0.22
CPSF1-205ENST00000531042 RNF212BA8MTL3 300 aa13.68□□□□□ -0.22
CPSF1-205ENST00000531042 ZNF99A8MXY4 864 aaPredicted RBP13.68□□□□□ -0.22
CPSF1-205ENST00000531042 M0R3G1 203 aa13.68□□□□□ -0.22
CPSF1-205ENST00000531042 SERPINB7O75635 380 aa13.68□□□□□ -0.22
CPSF1-205ENST00000531042 HLA-DOBP13765 273 aa13.68□□□□□ -0.22
CPSF1-205ENST00000531042 NQO1P15559 274 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms