RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 SLC38A4Q969I6 547 aa13.71□□□□□ -0.21
CHMP4A-204ENST00000530996 VPS33AQ96AX1 596 aa13.71□□□□□ -0.21
CHMP4A-204ENST00000530996 ZNF587Q96SQ5 575 aaPredicted RBP13.71□□□□□ -0.21
CHMP4A-204ENST00000530996 SOX7Q9BT81 388 aa13.71□□□□□ -0.21
CHMP4A-204ENST00000530996 PTDSS2Q9BVG9 487 aa13.71□□□□□ -0.21
CHMP4A-204ENST00000530996 GPR35Q9HC97 309 aa13.71□□□□□ -0.21
CHMP4A-204ENST00000530996 SELENONQ9NZV5 590 aa13.71□□□□□ -0.21
CHMP4A-204ENST00000530996 PRDM4Q9UKN5 801 aa13.71□□□□□ -0.21
CHMP4A-204ENST00000530996 USP22Q9UPT9 525 aa13.71□□□□□ -0.21
CHMP4A-204ENST00000530996 FTCDNL1E5RQL4 147 aa13.7□□□□□ -0.22
CHMP4A-204ENST00000530996 IGKV3-15P01624 115 aa13.7□□□□□ -0.22
CHMP4A-204ENST00000530996 CD79AP11912 226 aa13.7□□□□□ -0.22
CHMP4A-204ENST00000530996 HOXB1P14653 301 aaPredicted RBP13.7□□□□□ -0.22
CHMP4A-204ENST00000530996 IFNGR1P15260 489 aa13.7□□□□□ -0.22
CHMP4A-204ENST00000530996 CBR1P16152 277 aa13.7□□□□□ -0.22
CHMP4A-204ENST00000530996 ARR3P36575 388 aa13.7□□□□□ -0.22
CHMP4A-204ENST00000530996 POLR2JP52435 117 aaKnown RBP13.7□□□□□ -0.22
CHMP4A-204ENST00000530996 HGFACQ04756 655 aa13.7□□□□□ -0.22
CHMP4A-204ENST00000530996 DAG1Q14118 895 aa13.7□□□□□ -0.22
CHMP4A-204ENST00000530996 FAM69AQ5T7M9 428 aa13.7□□□□□ -0.22
CHMP4A-204ENST00000530996 RINLQ6ZS11 566 aa13.7□□□□□ -0.22
CHMP4A-204ENST00000530996 MSANTD1Q6ZTZ1 278 aa13.7□□□□□ -0.22
CHMP4A-204ENST00000530996 ZCCHC24Q8N2G6 241 aaKnown RBP13.7□□□□□ -0.22
CHMP4A-204ENST00000530996 OR9I1Q8NGQ6 314 aa13.7□□□□□ -0.22
CHMP4A-204ENST00000530996 MAL2Q969L2 176 aa13.7□□□□□ -0.22
CHMP4A-204ENST00000530996 OXGR1Q96P68 337 aa13.7□□□□□ -0.22
CHMP4A-204ENST00000530996 RAD21L1Q9H4I0 556 aa13.7□□□□□ -0.22
CHMP4A-204ENST00000530996 NOX3Q9HBY0 568 aa13.7□□□□□ -0.22
CHMP4A-204ENST00000530996 THAP1Q9NVV9 213 aa13.7□□□□□ -0.22
CHMP4A-204ENST00000530996 ZIM2Q9NZV7 527 aa13.7□□□□□ -0.22
CHMP4A-204ENST00000530996 TMEM120BA0PK00 339 aa13.69□□□□□ -0.22
CHMP4A-204ENST00000530996 SLCO1B7G3V0H7 640 aa13.69□□□□□ -0.22
CHMP4A-204ENST00000530996 UBDO15205 165 aa13.69□□□□□ -0.22
CHMP4A-204ENST00000530996 TCF21O43680 179 aa13.69□□□□□ -0.22
CHMP4A-204ENST00000530996 ADRA2AP08913 450 aa13.69□□□□□ -0.22
CHMP4A-204ENST00000530996 NUDT7P0C024 238 aa13.69□□□□□ -0.22
CHMP4A-204ENST00000530996 ZCCHC18P0CG32 403 aa13.69□□□□□ -0.22
CHMP4A-204ENST00000530996 GRPRP30550 384 aa13.69□□□□□ -0.22
CHMP4A-204ENST00000530996 IL2RGP31785 369 aa13.69□□□□□ -0.22
CHMP4A-204ENST00000530996 EGR4Q05215 589 aa13.69□□□□□ -0.22
CHMP4A-204ENST00000530996 SLC9B1Q4ZJI4 515 aa13.69□□□□□ -0.22
CHMP4A-204ENST00000530996 C5orf46Q6UWT4 87 aa13.69□□□□□ -0.22
CHMP4A-204ENST00000530996 UEVLDQ8IX04 471 aa13.69□□□□□ -0.22
CHMP4A-204ENST00000530996 MIER2Q8N344 545 aa13.69□□□□□ -0.22
CHMP4A-204ENST00000530996 FAM169BQ8N8A8 192 aa13.69□□□□□ -0.22
CHMP4A-204ENST00000530996 LINC01356Q8N9X3 169 aa13.69□□□□□ -0.22
CHMP4A-204ENST00000530996 ANKK1Q8NFD2 765 aa13.69□□□□□ -0.22
CHMP4A-204ENST00000530996 OR2M2Q96R28 347 aa13.69□□□□□ -0.22
CHMP4A-204ENST00000530996 B3GAT2Q9NPZ5 323 aa13.69□□□□□ -0.22
CHMP4A-204ENST00000530996 B3GAT1Q9P2W7 334 aa13.69□□□□□ -0.22
CHMP4A-204ENST00000530996 CMAHPQ9Y471 501 aa13.69□□□□□ -0.22
CHMP4A-204ENST00000530996 CHST2Q9Y4C5 530 aa13.69□□□□□ -0.22
CHMP4A-204ENST00000530996 NOX1Q9Y5S8 564 aa13.69□□□□□ -0.22
CHMP4A-204ENST00000530996 TRAV36DV7A0A075B6V5 113 aa13.68□□□□□ -0.22
CHMP4A-204ENST00000530996 ZNF503-AS2A6NEH8 195 aa13.68□□□□□ -0.22
CHMP4A-204ENST00000530996 ZNF99A8MXY4 864 aaPredicted RBP13.68□□□□□ -0.22
CHMP4A-204ENST00000530996 RPL36A-HNRNPH2H7BZ11 118 aa13.68□□□□□ -0.22
CHMP4A-204ENST00000530996 OR2T1O43869 369 aa13.68□□□□□ -0.22
CHMP4A-204ENST00000530996 SERPINI2O75830 405 aa13.68□□□□□ -0.22
CHMP4A-204ENST00000530996 HLA-HP01893 362 aa13.68□□□□□ -0.22
CHMP4A-204ENST00000530996 STX1BP61266 288 aa13.68□□□□□ -0.22
CHMP4A-204ENST00000530996 POU3F1Q03052 451 aaPredicted RBP13.68□□□□□ -0.22
CHMP4A-204ENST00000530996 RGNQ15493 299 aa13.68□□□□□ -0.22
CHMP4A-204ENST00000530996 GSG1Q2KHT4 349 aa13.68□□□□□ -0.22
CHMP4A-204ENST00000530996 ALG10BQ5I7T1 473 aa13.68□□□□□ -0.22
CHMP4A-204ENST00000530996 GKAP1Q5VSY0 366 aaPredicted RBP13.68□□□□□ -0.22
CHMP4A-204ENST00000530996 C10orf53Q8N6V4 93 aa13.68□□□□□ -0.22
CHMP4A-204ENST00000530996 GOLGA6L1Q8N7Z2 621 aa13.68□□□□□ -0.22
CHMP4A-204ENST00000530996 NFKBIDQ8NI38 313 aa13.68□□□□□ -0.22
CHMP4A-204ENST00000530996 UBASH3BQ8TF42 649 aa13.68□□□□□ -0.22
CHMP4A-204ENST00000530996 TAAR8Q969N4 342 aa13.68□□□□□ -0.22
CHMP4A-204ENST00000530996 ZNF837Q96EG3 531 aaPredicted RBP13.68□□□□□ -0.22
CHMP4A-204ENST00000530996 NARFLQ9H6Q4 476 aa13.68□□□□□ -0.22
CHMP4A-204ENST00000530996 A4GALTQ9NPC4 353 aa13.68□□□□□ -0.22
CHMP4A-204ENST00000530996 NKIRAS1Q9NYS0 192 aa13.68□□□□□ -0.22
CHMP4A-204ENST00000530996 TMEFF2Q9UIK5 374 aaPredicted RBP13.68□□□□□ -0.22
CHMP4A-204ENST00000530996 SLC13A4Q9UKG4 626 aa13.68□□□□□ -0.22
CHMP4A-204ENST00000530996 A0A1B0GWA3 101 aa13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 M0R233 179 aa13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 TRAF3IP2O43734 574 aaPredicted RBP13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 SNNO75324 88 aaPredicted RBP13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 ZNF432O94892 652 aa13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 RAB36O95755 333 aa13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 GIFP27352 417 aa13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 GALK2Q01415 458 aa13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 FADDQ13158 208 aa13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 TRIP10Q15642 601 aa13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 GCNT6Q5T4J0 391 aa13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 SLC2A7Q6PXP3 512 aa13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 C6orf89Q6UWU4 347 aa13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 ZNF813Q6ZN06 617 aa13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 H1FNTQ75WM6 255 aaPredicted RBP13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 CROCCP2Q86T23 111 aa13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 KRT73Q86Y46 540 aa13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 CCDC36Q8IYA8 594 aa13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 TMEM123Q8N131 208 aa13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 ZNF786Q8N393 782 aa13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 RFLNBQ8N5W9 214 aa13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 HPS1Q92902 700 aa13.67□□□□□ -0.22
CHMP4A-204ENST00000530996 SLC35B4Q969S0 331 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms