RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 GLB1L3Q8NCI6 653 aaPredicted RBP12.88□□□□□ -0.35
CAPN1-219ENST00000530495 AENQ8WTP8 325 aaKnown RBP12.88□□□□□ -0.35
CAPN1-219ENST00000530495 SLC35B4Q969S0 331 aa12.88□□□□□ -0.35
CAPN1-219ENST00000530495 THUMPD1Q9NXG2 353 aaKnown RBP12.88□□□□□ -0.35
CAPN1-219ENST00000530495 B3GNT2Q9NY97 397 aa12.88□□□□□ -0.35
CAPN1-219ENST00000530495 IFT52Q9Y366 437 aa12.88□□□□□ -0.35
CAPN1-219ENST00000530495 CMAHPQ9Y471 501 aa12.88□□□□□ -0.35
CAPN1-219ENST00000530495 ZNF99A8MXY4 864 aaPredicted RBP12.87□□□□□ -0.35
CAPN1-219ENST00000530495 B4DSR2 109 aa12.87□□□□□ -0.35
CAPN1-219ENST00000530495 LYNX1G3V0Z9 82 aa12.87□□□□□ -0.35
CAPN1-219ENST00000530495 OR2T1O43869 369 aa12.87□□□□□ -0.35
CAPN1-219ENST00000530495 LYNX1P0DP58 116 aa12.87□□□□□ -0.35
CAPN1-219ENST00000530495 GTF2E2P29084 291 aaKnown RBP12.87□□□□□ -0.35
CAPN1-219ENST00000530495 RUNX1T1Q06455 604 aa12.87□□□□□ -0.35
CAPN1-219ENST00000530495 NPRL3Q12980 569 aa12.87□□□□□ -0.35
CAPN1-219ENST00000530495 SNTB2Q13425 540 aaKnown RBP12.87□□□□□ -0.35
CAPN1-219ENST00000530495 C1DQ13901 141 aaKnown RBP12.87□□□□□ -0.35
CAPN1-219ENST00000530495 C6orf89Q6UWU4 347 aa12.87□□□□□ -0.35
CAPN1-219ENST00000530495 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.87□□□□□ -0.35
CAPN1-219ENST00000530495 PIK3C3Q8NEB9 887 aa12.87□□□□□ -0.35
CAPN1-219ENST00000530495 ZFAND2BQ8WV99 257 aa12.87□□□□□ -0.35
CAPN1-219ENST00000530495 OR2M2Q96R28 347 aa12.87□□□□□ -0.35
CAPN1-219ENST00000530495 MS4A5Q9H3V2 200 aa12.87□□□□□ -0.35
CAPN1-219ENST00000530495 TPT1P8Q9HAU6 139 aa12.87□□□□□ -0.35
CAPN1-219ENST00000530495 NOX3Q9HBY0 568 aa12.87□□□□□ -0.35
CAPN1-219ENST00000530495 SEC14L4Q9UDX3 406 aa12.87□□□□□ -0.35
CAPN1-219ENST00000530495 USP22Q9UPT9 525 aa12.87□□□□□ -0.35
CAPN1-219ENST00000530495 AIM2O14862 343 aa12.86□□□□□ -0.35
CAPN1-219ENST00000530495 SYNGR3O43761 229 aa12.86□□□□□ -0.35
CAPN1-219ENST00000530495 SLC22A3O75751 556 aa12.86□□□□□ -0.35
CAPN1-219ENST00000530495 ZNF35P13682 527 aa12.86□□□□□ -0.35
CAPN1-219ENST00000530495 CFPP27918 469 aa12.86□□□□□ -0.35
CAPN1-219ENST00000530495 HOXC5Q00444 222 aa12.86□□□□□ -0.35
CAPN1-219ENST00000530495 IL1RL1Q01638 556 aa12.86□□□□□ -0.35
CAPN1-219ENST00000530495 BST1Q10588 318 aa12.86□□□□□ -0.35
CAPN1-219ENST00000530495 MPP2Q14168 576 aa12.86□□□□□ -0.35
CAPN1-219ENST00000530495 SLC9B1Q4ZJI4 515 aa12.86□□□□□ -0.35
CAPN1-219ENST00000530495 ZNF311Q5JNZ3 666 aa12.86□□□□□ -0.35
CAPN1-219ENST00000530495 RPS26P11Q5JNZ5 115 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-219ENST00000530495 PHYHD1Q5SRE7 291 aa12.86□□□□□ -0.35
CAPN1-219ENST00000530495 KRT80Q6KB66 452 aa12.86□□□□□ -0.35
CAPN1-219ENST00000530495 C5orf46Q6UWT4 87 aa12.86□□□□□ -0.35
CAPN1-219ENST00000530495 C12orf54Q6X4T0 127 aa12.86□□□□□ -0.35
CAPN1-219ENST00000530495 H1FNTQ75WM6 255 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-219ENST00000530495 NET1Q7Z628 596 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-219ENST00000530495 TMEM123Q8N131 208 aa12.86□□□□□ -0.35
CAPN1-219ENST00000530495 TAAR8Q969N4 342 aa12.86□□□□□ -0.35
CAPN1-219ENST00000530495 MRPL24Q96A35 216 aaKnown RBP12.86□□□□□ -0.35
CAPN1-219ENST00000530495 TMEM19Q96HH6 336 aa12.86□□□□□ -0.35
CAPN1-219ENST00000530495 ZNF75AQ96N20 296 aa12.86□□□□□ -0.35
CAPN1-219ENST00000530495 OCEL1Q9H607 264 aa12.86□□□□□ -0.35
CAPN1-219ENST00000530495 WDR55Q9H6Y2 383 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-219ENST00000530495 C12orf10Q9HB07 376 aa12.86□□□□□ -0.35
CAPN1-219ENST00000530495 CACYBPQ9HB71 228 aaKnown RBP12.86□□□□□ -0.35
CAPN1-219ENST00000530495 BCL2L10Q9HD36 194 aa12.86□□□□□ -0.35
CAPN1-219ENST00000530495 REV1Q9UBZ9 1251 aa12.86□□□□□ -0.35
CAPN1-219ENST00000530495 ANK2Q01484 3957 aa12.85□□□□□ -0.35
CAPN1-219ENST00000530495 TMEM247A6NEH6 219 aa12.85□□□□□ -0.35
CAPN1-219ENST00000530495 MS4A18H0YCH9 400 aa12.85□□□□□ -0.35
CAPN1-219ENST00000530495 RGS16O15492 202 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-219ENST00000530495 VENTXO95231 258 aa12.85□□□□□ -0.35
CAPN1-219ENST00000530495 ANP32DO95626 131 aa12.85□□□□□ -0.35
CAPN1-219ENST00000530495 EPHA3P29320 983 aa12.85□□□□□ -0.35
CAPN1-219ENST00000530495 CAPZA2P47755 286 aa12.85□□□□□ -0.35
CAPN1-219ENST00000530495 CCNIQ14094 377 aa12.85□□□□□ -0.35
CAPN1-219ENST00000530495 MSMPQ1L6U9 139 aa12.85□□□□□ -0.35
CAPN1-219ENST00000530495 MS4A18Q3C1V0 323 aa12.85□□□□□ -0.35
CAPN1-219ENST00000530495 ELFN2Q5R3F8 820 aa12.85□□□□□ -0.35
CAPN1-219ENST00000530495 FAM69AQ5T7M9 428 aa12.85□□□□□ -0.35
CAPN1-219ENST00000530495 RINLQ6ZS11 566 aa12.85□□□□□ -0.35
CAPN1-219ENST00000530495 ZNF627Q7L945 461 aa12.85□□□□□ -0.35
CAPN1-219ENST00000530495 GLCCI1Q86VQ1 547 aa12.85□□□□□ -0.35
CAPN1-219ENST00000530495 LSMEM1Q8N8F7 131 aa12.85□□□□□ -0.35
CAPN1-219ENST00000530495 LRR1Q96L50 414 aa12.85□□□□□ -0.35
CAPN1-219ENST00000530495 MRPL37Q9BZE1 423 aaKnown RBP12.85□□□□□ -0.35
CAPN1-219ENST00000530495 PLA2G12AQ9BZM1 189 aa12.85□□□□□ -0.35
CAPN1-219ENST00000530495 RACGAP1Q9H0H5 632 aa12.85□□□□□ -0.35
CAPN1-219ENST00000530495 TPK1Q9H3S4 243 aa12.85□□□□□ -0.35
CAPN1-219ENST00000530495 SPEF1Q9Y4P9 236 aa12.85□□□□□ -0.35
CAPN1-219ENST00000530495 TENM1Q9UKZ4 2725 aa12.85□□□□□ -0.35
CAPN1-219ENST00000530495 DYSFO75923 2080 aa12.84□□□□□ -0.35
CAPN1-219ENST00000530495 TRPC5OSA6NMA1 111 aa12.84□□□□□ -0.35
CAPN1-219ENST00000530495 M0R082 166 aa12.84□□□□□ -0.35
CAPN1-219ENST00000530495 M0R233 179 aa12.84□□□□□ -0.35
CAPN1-219ENST00000530495 M0R3G1 203 aa12.84□□□□□ -0.35
CAPN1-219ENST00000530495 HDAC3O15379 428 aa12.84□□□□□ -0.35
CAPN1-219ENST00000530495 TRAF3IP2O43734 574 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-219ENST00000530495 AKAP8O43823 692 aaKnown RBP12.84□□□□□ -0.35
CAPN1-219ENST00000530495 HLA-HP01893 362 aa12.84□□□□□ -0.35
CAPN1-219ENST00000530495 IDO1P14902 403 aa12.84□□□□□ -0.35
CAPN1-219ENST00000530495 ZNF14P17017 642 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-219ENST00000530495 COL8A2P25067 703 aa12.84□□□□□ -0.35
CAPN1-219ENST00000530495 GLRXP35754 106 aa12.84□□□□□ -0.35
CAPN1-219ENST00000530495 GSG1Q2KHT4 349 aa12.84□□□□□ -0.35
CAPN1-219ENST00000530495 KRT71Q3SY84 523 aa12.84□□□□□ -0.35
CAPN1-219ENST00000530495 PDCD4Q53EL6 469 aaKnown RBP12.84□□□□□ -0.35
CAPN1-219ENST00000530495 NHLRC1Q6VVB1 395 aa12.84□□□□□ -0.35
CAPN1-219ENST00000530495 C20orf196Q8IYI0 205 aa12.84□□□□□ -0.35
CAPN1-219ENST00000530495 ADPRHL1Q8NDY3 354 aa12.84□□□□□ -0.35
CAPN1-219ENST00000530495 SEMA6DQ8NFY4 1073 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms