RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 SH3BGRP55822 239 aaPredicted RBP17.96■□□□□ 0.47
TSPAN4-219ENST00000530404 ZSWIM7Q19AV6 140 aa17.96■□□□□ 0.47
TSPAN4-219ENST00000530404 CARD17Q5XLA6 110 aa17.96■□□□□ 0.47
TSPAN4-219ENST00000530404 MDP1Q86V88 176 aa17.96■□□□□ 0.47
TSPAN4-219ENST00000530404 NUP37Q8NFH4 326 aa17.96■□□□□ 0.47
TSPAN4-219ENST00000530404 GTF2H4Q92759 462 aa17.96■□□□□ 0.47
TSPAN4-219ENST00000530404 RAB1BQ9H0U4 201 aa17.96■□□□□ 0.47
TSPAN4-219ENST00000530404 CRLF2Q9HC73 371 aa17.96■□□□□ 0.47
TSPAN4-219ENST00000530404 SDR39U1Q9NRG7 319 aaPredicted RBP17.96■□□□□ 0.47
TSPAN4-219ENST00000530404 RCE1Q9Y256 329 aa17.96■□□□□ 0.47
TSPAN4-219ENST00000530404 TMEM129A0AVI4 362 aa17.95■□□□□ 0.46
TSPAN4-219ENST00000530404 SLCO1B7G3V0H7 640 aa17.95■□□□□ 0.46
TSPAN4-219ENST00000530404 RPL36A-HNRNPH2H7BZ11 118 aa17.95■□□□□ 0.46
TSPAN4-219ENST00000530404 CLIC1O00299 241 aa17.95■□□□□ 0.46
TSPAN4-219ENST00000530404 AIM2O14862 343 aa17.95■□□□□ 0.46
TSPAN4-219ENST00000530404 UBDO15205 165 aa17.95■□□□□ 0.46
TSPAN4-219ENST00000530404 DAOP14920 347 aa17.95■□□□□ 0.46
TSPAN4-219ENST00000530404 CBR1P16152 277 aa17.95■□□□□ 0.46
TSPAN4-219ENST00000530404 NPR2P20594 1047 aa17.95■□□□□ 0.46
TSPAN4-219ENST00000530404 GRPRP30550 384 aa17.95■□□□□ 0.46
TSPAN4-219ENST00000530404 C1DQ13901 141 aaKnown RBP17.95■□□□□ 0.46
TSPAN4-219ENST00000530404 CR1LQ2VPA4 569 aa17.95■□□□□ 0.46
TSPAN4-219ENST00000530404 KRT80Q6KB66 452 aa17.95■□□□□ 0.46
TSPAN4-219ENST00000530404 MSANTD1Q6ZTZ1 278 aa17.95■□□□□ 0.46
TSPAN4-219ENST00000530404 CDK20Q8IZL9 346 aa17.95■□□□□ 0.46
TSPAN4-219ENST00000530404 NFKBIDQ8NI38 313 aa17.95■□□□□ 0.46
TSPAN4-219ENST00000530404 BBS10Q8TAM1 723 aa17.95■□□□□ 0.46
TSPAN4-219ENST00000530404 ZNF317Q96PQ6 595 aaPredicted RBP17.95■□□□□ 0.46
TSPAN4-219ENST00000530404 DOK1Q99704 481 aa17.95■□□□□ 0.46
TSPAN4-219ENST00000530404 A4GALTQ9NPC4 353 aa17.95■□□□□ 0.46
TSPAN4-219ENST00000530404 PRDM4Q9UKN5 801 aa17.95■□□□□ 0.46
TSPAN4-219ENST00000530404 IGKV1D-42A0A075B6H8 117 aa17.94■□□□□ 0.46
TSPAN4-219ENST00000530404 A0A1B0GWA3 101 aa17.94■□□□□ 0.46
TSPAN4-219ENST00000530404 LYNX1G3V0Z9 82 aa17.94■□□□□ 0.46
TSPAN4-219ENST00000530404 M0R3G1 203 aa17.94■□□□□ 0.46
TSPAN4-219ENST00000530404 IGFBP1P08833 259 aaPredicted RBP17.94■□□□□ 0.46
TSPAN4-219ENST00000530404 LYNX1P0DP58 116 aa17.94■□□□□ 0.46
TSPAN4-219ENST00000530404 HLA-DOBP13765 273 aa17.94■□□□□ 0.46
TSPAN4-219ENST00000530404 HOXB1P14653 301 aaPredicted RBP17.94■□□□□ 0.46
TSPAN4-219ENST00000530404 HNF1AP20823 631 aa17.94■□□□□ 0.46
TSPAN4-219ENST00000530404 PAX7P23759 505 aa17.94■□□□□ 0.46
TSPAN4-219ENST00000530404 GLIPR1L2Q4G1C9 344 aa17.94■□□□□ 0.46
TSPAN4-219ENST00000530404 WDFY1Q8IWB7 410 aa17.94■□□□□ 0.46
TSPAN4-219ENST00000530404 C10orf111Q8N326 155 aa17.94■□□□□ 0.46
TSPAN4-219ENST00000530404 MIER2Q8N344 545 aa17.94■□□□□ 0.46
TSPAN4-219ENST00000530404 RNF217Q8TC41 542 aa17.94■□□□□ 0.46
TSPAN4-219ENST00000530404 OR2M2Q96R28 347 aa17.94■□□□□ 0.46
TSPAN4-219ENST00000530404 EMC6Q9BV81 110 aa17.94■□□□□ 0.46
TSPAN4-219ENST00000530404 TPK1Q9H3S4 243 aa17.94■□□□□ 0.46
TSPAN4-219ENST00000530404 ZNF442Q9H7R0 627 aa17.94■□□□□ 0.46
TSPAN4-219ENST00000530404 BCL2L10Q9HD36 194 aa17.94■□□□□ 0.46
TSPAN4-219ENST00000530404 THUMPD1Q9NXG2 353 aaKnown RBP17.94■□□□□ 0.46
TSPAN4-219ENST00000530404 C5orf58C9J3I9 102 aa17.93■□□□□ 0.46
TSPAN4-219ENST00000530404 TRAF3IP2O43734 574 aaPredicted RBP17.93■□□□□ 0.46
TSPAN4-219ENST00000530404 HPRP00739 348 aa17.93■□□□□ 0.46
TSPAN4-219ENST00000530404 HOXB9P17482 250 aaPredicted RBP17.93■□□□□ 0.46
TSPAN4-219ENST00000530404 SNTB2Q13425 540 aaKnown RBP17.93■□□□□ 0.46
TSPAN4-219ENST00000530404 TRIP10Q15642 601 aa17.93■□□□□ 0.46
TSPAN4-219ENST00000530404 ADRM1Q16186 407 aa17.93■□□□□ 0.46
TSPAN4-219ENST00000530404 FAM69AQ5T7M9 428 aa17.93■□□□□ 0.46
TSPAN4-219ENST00000530404 C6orf89Q6UWU4 347 aa17.93■□□□□ 0.46
TSPAN4-219ENST00000530404 FAM169BQ8N8A8 192 aa17.93■□□□□ 0.46
TSPAN4-219ENST00000530404 SLC38A4Q969I6 547 aa17.93■□□□□ 0.46
TSPAN4-219ENST00000530404 SNX18Q96RF0 628 aa17.93■□□□□ 0.46
TSPAN4-219ENST00000530404 NOX3Q9HBY0 568 aa17.93■□□□□ 0.46
TSPAN4-219ENST00000530404 DYNLRB1Q9NP97 96 aa17.93■□□□□ 0.46
TSPAN4-219ENST00000530404 RAB21Q9UL25 225 aa17.93■□□□□ 0.46
TSPAN4-219ENST00000530404 MS4A18H0YCH9 400 aa17.92■□□□□ 0.46
TSPAN4-219ENST00000530404 TPST1O60507 370 aa17.92■□□□□ 0.46
TSPAN4-219ENST00000530404 LILRA1O75019 489 aa17.92■□□□□ 0.46
TSPAN4-219ENST00000530404 FZD7O75084 574 aa17.92■□□□□ 0.46
TSPAN4-219ENST00000530404 APEX1P27695 318 aaKnown RBP17.92■□□□□ 0.46
TSPAN4-219ENST00000530404 THBS2P35442 1172 aa17.92■□□□□ 0.46
TSPAN4-219ENST00000530404 FADDQ13158 208 aa17.92■□□□□ 0.46
TSPAN4-219ENST00000530404 DAG1Q14118 895 aa17.92■□□□□ 0.46
TSPAN4-219ENST00000530404 MSMPQ1L6U9 139 aa17.92■□□□□ 0.46
TSPAN4-219ENST00000530404 MS4A18Q3C1V0 323 aa17.92■□□□□ 0.46
TSPAN4-219ENST00000530404 ALG10BQ5I7T1 473 aa17.92■□□□□ 0.46
TSPAN4-219ENST00000530404 H1FNTQ75WM6 255 aaPredicted RBP17.92■□□□□ 0.46
TSPAN4-219ENST00000530404 TMEM123Q8N131 208 aa17.92■□□□□ 0.46
TSPAN4-219ENST00000530404 ZNF540Q8NDQ6 660 aa17.92■□□□□ 0.46
TSPAN4-219ENST00000530404 PIK3C3Q8NEB9 887 aa17.92■□□□□ 0.46
TSPAN4-219ENST00000530404 CKAP2Q8WWK9 683 aa17.92■□□□□ 0.46
TSPAN4-219ENST00000530404 MS4A3Q96HJ5 214 aa17.92■□□□□ 0.46
TSPAN4-219ENST00000530404 RAD21L1Q9H4I0 556 aa17.92■□□□□ 0.46
TSPAN4-219ENST00000530404 SLC25A37Q9NYZ2 338 aa17.92■□□□□ 0.46
TSPAN4-219ENST00000530404 SLAMF8Q9P0V8 285 aa17.92■□□□□ 0.46
TSPAN4-219ENST00000530404 KLHL14Q9P2G3 628 aa17.92■□□□□ 0.46
TSPAN4-219ENST00000530404 TRAV36DV7A0A075B6V5 113 aa17.91■□□□□ 0.46
TSPAN4-219ENST00000530404 ZNF99A8MXY4 864 aaPredicted RBP17.91■□□□□ 0.46
TSPAN4-219ENST00000530404 OR2T1O43869 369 aa17.91■□□□□ 0.46
TSPAN4-219ENST00000530404 HLA-HP01893 362 aa17.91■□□□□ 0.46
TSPAN4-219ENST00000530404 ADRA2AP08913 450 aa17.91■□□□□ 0.46
TSPAN4-219ENST00000530404 ARAFP10398 606 aa17.91■□□□□ 0.46
TSPAN4-219ENST00000530404 CD79AP11912 226 aa17.91■□□□□ 0.46
TSPAN4-219ENST00000530404 BMP2P12643 396 aa17.91■□□□□ 0.46
TSPAN4-219ENST00000530404 NQO1P15559 274 aaKnown RBP17.91■□□□□ 0.46
TSPAN4-219ENST00000530404 GIFP27352 417 aa17.91■□□□□ 0.46
TSPAN4-219ENST00000530404 ARR3P36575 388 aa17.91■□□□□ 0.46
TSPAN4-219ENST00000530404 AQP5P55064 265 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms