RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 SLC2A5P22732 501 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 IFITM3Q01628 133 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 SCN1BQ07699 218 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 PLCXD2Q0VAA5 305 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 SKP2Q13309 424 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 EFR3AQ14156 821 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 GGTLC2Q14390 218 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.69□□□□□ -0.7
USF1-208ENST00000528768 FNDC7Q5VTL7 733 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 MAMDC2Q7Z304 686 aaPredicted RBP10.69□□□□□ -0.7
USF1-208ENST00000528768 ATG4DQ86TL0 474 aaPredicted RBP10.69□□□□□ -0.7
USF1-208ENST00000528768 MISPQ8IVT2 679 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 SHISA5Q8N114 240 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 SYS1Q8N2H4 156 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 TMEM99Q8N816 258 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 OR1N1Q8NGS0 311 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 TSLPQ969D9 159 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 TP53INP1Q96A56 240 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 KCTD12Q96CX2 325 aaKnown RBP10.69□□□□□ -0.7
USF1-208ENST00000528768 ZNF501Q96CX3 271 aaPredicted RBP10.69□□□□□ -0.7
USF1-208ENST00000528768 DIRAS2Q96HU8 199 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 GPX7Q96SL4 187 aaPredicted RBP10.69□□□□□ -0.7
USF1-208ENST00000528768 TM9SF2Q99805 663 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 BARHL1Q9BZE3 327 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 TGIF2Q9GZN2 237 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 NANSQ9NR45 359 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 DHCR7Q9UBM7 475 aaKnown RBP10.69□□□□□ -0.7
USF1-208ENST00000528768 MKL2Q9ULH7 1088 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 MOKQ9UQ07 419 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 POLQO75417 2590 aa10.69□□□□□ -0.7
USF1-208ENST00000528768 CRYBG3Q68DQ2 2970 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 A0A1W2PQL4 384 aaPredicted RBP10.68□□□□□ -0.7
USF1-208ENST00000528768 OR2W5A6NFC9 320 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 J3QLW9 94 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 GNB5O14775 395 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 NDUFB5O43674 189 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 PLPP2O43688 288 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 CDC40O60508 579 aaKnown RBP eCLIP10.68□□□□□ -0.7
USF1-208ENST00000528768 RAD1O60671 282 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 TMCC2O75069 709 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 SLC25A12O75746 678 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 CD1AP06126 327 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 ZNF19P17023 458 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 CXCR1P25024 350 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 GTF2E2P29084 291 aaKnown RBP10.68□□□□□ -0.7
USF1-208ENST00000528768 DIO1P49895 249 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 NR0B1P51843 470 aaKnown RBP10.68□□□□□ -0.7
USF1-208ENST00000528768 MRPL28Q13084 256 aaKnown RBP10.68□□□□□ -0.7
USF1-208ENST00000528768 DNASE1L3Q13609 305 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 CBFBQ13951 182 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 EBPQ15125 230 aaKnown RBP10.68□□□□□ -0.7
USF1-208ENST00000528768 GPR139Q6DWJ6 353 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 RHBDD2Q6NTF9 364 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 C5orf46Q6UWT4 87 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 VASH1Q7L8A9 365 aaPredicted RBP10.68□□□□□ -0.7
USF1-208ENST00000528768 BPHLQ86WA6 291 aaPredicted RBP10.68□□□□□ -0.7
USF1-208ENST00000528768 ZFP41Q8N8Y5 198 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 AGBL5Q8NDL9 886 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 OR4K13Q8NH42 304 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 SNX33Q8WV41 574 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.68□□□□□ -0.7
USF1-208ENST00000528768 METTL21AQ8WXB1 218 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 KISS1RQ969F8 398 aaPredicted RBP10.68□□□□□ -0.7
USF1-208ENST00000528768 ADIPOR1Q96A54 375 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 TRMT61AQ96FX7 289 aaKnown RBP10.68□□□□□ -0.7
USF1-208ENST00000528768 ADOQ96SZ5 270 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 MNTQ99583 582 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 TBX5Q99593 518 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 ZNF649Q9BS31 505 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 KATNB1Q9BVA0 655 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 NUDT9Q9BW91 350 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 HDHD5Q9BXW7 423 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 WWTR1Q9GZV5 400 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 ENKD1Q9H0I2 346 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 ADGRL4Q9HBW9 690 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 ABCB9Q9NP78 766 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 NRIP3Q9NQ35 241 aa10.68□□□□□ -0.7
USF1-208ENST00000528768 SDK2Q58EX2 2172 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 ALG1L2C9J202 215 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 HCRTR2O43614 444 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 TRIM3O75382 744 aaPredicted RBP10.67□□□□□ -0.7
USF1-208ENST00000528768 ARL6IP5O75915 188 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 RENP00797 406 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 HEXBP07686 556 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 CD14P08571 375 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 CYC1P08574 325 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 TACSTD2P09758 323 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 ATXN8OSP0DMR3 200 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 CCL4P13236 92 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 HIST1H1CP16403 213 aaKnown RBP10.67□□□□□ -0.7
USF1-208ENST00000528768 CSF2RBP32927 897 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 HTR3AP46098 478 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 CENPAP49450 140 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 SLC25A1P53007 311 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 DOC2BQ14184 412 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 ZNF74Q16587 644 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 NDUFAF6Q330K2 333 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 CCDC58Q4VC31 144 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 ALG10Q5BKT4 473 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 DCAF12Q5T6F0 453 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms