RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 C11orf98E9PRG8 122 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 H0YAE9 185 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 PRRG2O14669 202 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 CYTIPO60759 359 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 WDR1O75083 606 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 OR6A2O95222 327 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 OSMP13725 252 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 HLA-DOBP13765 273 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 POLR2IP36954 125 aaKnown RBP10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 RBPJQ06330 500 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 PUDPQ08623 228 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 ZP4Q12836 540 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 ANKDD1AQ495B1 522 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 TMEM225Q6GV28 225 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 ABLIM2Q6H8Q1 611 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 SMARCD3Q6STE5 483 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 NHLRC1Q6VVB1 395 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 RPTNQ6XPR3 784 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 C3P1Q6ZMU1 363 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 FCRLAQ7L513 359 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 IGFN1Q86VF2 1251 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 PARP8Q8N3A8 854 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 FANK1Q8TC84 345 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 RNF128Q8TEB7 428 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 SAMD8Q96LT4 415 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 CNBD2Q96M20 576 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 SMPD3Q9NY59 655 aaPredicted RBP10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 IL20Q9NYY1 176 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 TINAGQ9UJW2 476 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 ING1Q9UK53 422 aaPredicted RBP10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 ZNF175Q9Y473 711 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 FAM215AQ9Y5M1 114 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 CDH10Q9Y6N8 788 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 ZGRF1Q86YA3 2104 aa10.84□□□□□ -0.67
TRAF3IP2-211ENST00000528599 FIGNL2A6NMB9 653 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 ZNF716A6NP11 495 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 MCIDASD6RGH6 385 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 NDUFB2O95178 105 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 RCBTB2O95199 551 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 SNAP29O95721 258 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 F13BP05160 661 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 GABRA1P14867 456 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 MYF6P23409 242 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 AHCYP23526 432 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 ACVR2AP27037 513 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 EPHA2P29317 976 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 MYBPC1Q00872 1141 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 MRPL49Q13405 166 aaKnown RBP10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 SLC17A1Q14916 467 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 RFX4Q33E94 735 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 ZIK1Q3SY52 487 aaPredicted RBP10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 ALG10Q5BKT4 473 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 NSUN5P2Q63ZY6 315 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 SEM1Q6ZVN7 128 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 GPAT4Q86UL3 456 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 RPRMLQ8N4K4 120 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 CLDN22Q8N7P3 220 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 ABHD3Q8WU67 409 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 ADI1Q9BV57 179 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 PRRG4Q9BZD6 226 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 CXorf56Q9H5V9 222 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 CALHM2Q9HA72 323 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 FANCFQ9NPI8 374 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 RASD1Q9Y272 281 aa10.83□□□□□ -0.68
TRAF3IP2-211ENST00000528599 UTP20O75691 2785 aaKnown RBP10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 LOC102725191A0A1B0GVB3 256 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 A0A1W2PNV4 684 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 CD8B2A6NJW9 211 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 H3BN98 237 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 RNF13O43567 381 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 SERPINI2O75830 405 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 PLGP00747 810 aaPredicted RBP10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 POU1F1P28069 291 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 PTGER4P35408 488 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 CRISP1P54107 249 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 PRPS1P60891 318 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 ADARB1P78563 741 aaKnown RBP10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 RASGEF1BQ0VAM2 473 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 CLEC12AQ5QGZ9 265 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 C1orf185Q5T7R7 199 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 PXKQ7Z7A4 578 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 DHRSXQ8N5I4 330 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 C9orf106Q8NAJ2 232 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 WNT2BQ93097 391 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 OXGR1Q96P68 337 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 MBOAT4Q96T53 435 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 TSSK6Q9BXA6 273 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 GABARAPL3Q9BY60 117 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 YTHDF1Q9BYJ9 559 aaKnown RBP10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 MRPS26Q9BYN8 205 aaKnown RBP10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 TP63Q9H3D4 680 aaPredicted RBP10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 TOR3AQ9H497 397 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 RIBC2Q9H4K1 309 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 RNF122Q9H9V4 155 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 INIPQ9NRY2 104 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 HIVEP3Q5T1R4 2406 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 TRIM64A6NGJ6 449 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 J3QKU1 62 aa10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 TRAF3IP2O43734 574 aaPredicted RBP10.82□□□□□ -0.68
TRAF3IP2-211ENST00000528599 VAMP5O95183 116 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms