RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 ADAMTS16Q8TE57 1224 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 RASSF5Q8WWW0 418 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 IGFBPL1Q8WX77 278 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 TRMT61AQ96FX7 289 aaKnown RBP13.61□□□□□ -0.23
CAPN1-213ENST00000527897 EMC6Q9BV81 110 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 FAIMQ9NVQ4 179 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 MGAT4BQ9UQ53 548 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 CORINQ9Y5Q5 1042 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 ATP23Q9Y6H3 246 aa13.61□□□□□ -0.23
CAPN1-213ENST00000527897 ZFHX3Q15911 3703 aa13.6□□□□□ -0.23
CAPN1-213ENST00000527897 TRAPPC13A5PLN9 417 aa13.6□□□□□ -0.23
CAPN1-213ENST00000527897 C11orf98E9PRG8 122 aa13.6□□□□□ -0.23
CAPN1-213ENST00000527897 CHP2O43745 196 aa13.6□□□□□ -0.23
CAPN1-213ENST00000527897 AKAP8O43823 692 aaKnown RBP13.6□□□□□ -0.23
CAPN1-213ENST00000527897 SHOX2O60902 331 aaPredicted RBP13.6□□□□□ -0.23
CAPN1-213ENST00000527897 NPPAP01160 153 aa13.6□□□□□ -0.23
CAPN1-213ENST00000527897 INHBBP09529 407 aa13.6□□□□□ -0.23
CAPN1-213ENST00000527897 DANCRP0C864 163 aa13.6□□□□□ -0.23
CAPN1-213ENST00000527897 HLA-DOBP13765 273 aa13.6□□□□□ -0.23
CAPN1-213ENST00000527897 TUBA1BP68363 451 aa13.6□□□□□ -0.23
CAPN1-213ENST00000527897 TUBA4AP68366 448 aa13.6□□□□□ -0.23
CAPN1-213ENST00000527897 POU3F1Q03052 451 aaPredicted RBP13.6□□□□□ -0.23
CAPN1-213ENST00000527897 TBRG1Q3YBR2 411 aa13.6□□□□□ -0.23
CAPN1-213ENST00000527897 LRRC23Q53EV4 343 aaPredicted RBP13.6□□□□□ -0.23
CAPN1-213ENST00000527897 SWT1Q5T5J6 900 aaKnown RBP13.6□□□□□ -0.23
CAPN1-213ENST00000527897 TTC33Q6PID6 262 aaPredicted RBP13.6□□□□□ -0.23
CAPN1-213ENST00000527897 PRSS57Q6UWY2 283 aa13.6□□□□□ -0.23
CAPN1-213ENST00000527897 DEF8Q6ZN54 512 aa13.6□□□□□ -0.23
CAPN1-213ENST00000527897 TUBA1AQ71U36 451 aa13.6□□□□□ -0.23
CAPN1-213ENST00000527897 CARM1Q86X55 608 aa13.6□□□□□ -0.23
CAPN1-213ENST00000527897 CALHM3Q86XJ0 350 aa13.6□□□□□ -0.23
CAPN1-213ENST00000527897 CIARTQ8N365 385 aaPredicted RBP13.6□□□□□ -0.23
CAPN1-213ENST00000527897 TMEM43Q9BTV4 400 aa13.6□□□□□ -0.23
CAPN1-213ENST00000527897 BDH2Q9BUT1 245 aa13.6□□□□□ -0.23
CAPN1-213ENST00000527897 FAM107BQ9H098 131 aa13.6□□□□□ -0.23
CAPN1-213ENST00000527897 ZNF701Q9NV72 531 aaPredicted RBP13.6□□□□□ -0.23
CAPN1-213ENST00000527897 RCE1Q9Y256 329 aa13.6□□□□□ -0.23
CAPN1-213ENST00000527897 E7EQL1 145 aa13.59□□□□□ -0.23
CAPN1-213ENST00000527897 MS4A18H0YCH9 400 aa13.59□□□□□ -0.23
CAPN1-213ENST00000527897 M0R3G1 203 aa13.59□□□□□ -0.23
CAPN1-213ENST00000527897 TRAF3IP2O43734 574 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-213ENST00000527897 OR6A2O95222 327 aa13.59□□□□□ -0.23
CAPN1-213ENST00000527897 CH25HO95992 272 aa13.59□□□□□ -0.23
CAPN1-213ENST00000527897 HPRP00739 348 aa13.59□□□□□ -0.23
CAPN1-213ENST00000527897 THY1P04216 161 aa13.59□□□□□ -0.23
CAPN1-213ENST00000527897 ADORA3P0DMS8 318 aa13.59□□□□□ -0.23
CAPN1-213ENST00000527897 FABP6P51161 128 aa13.59□□□□□ -0.23
CAPN1-213ENST00000527897 CRYBA2P53672 197 aa13.59□□□□□ -0.23
CAPN1-213ENST00000527897 PUDPQ08623 228 aa13.59□□□□□ -0.23
CAPN1-213ENST00000527897 MS4A18Q3C1V0 323 aa13.59□□□□□ -0.23
CAPN1-213ENST00000527897 ERICH5Q6P6B1 374 aa13.59□□□□□ -0.23
CAPN1-213ENST00000527897 WDR88Q6ZMY6 472 aa13.59□□□□□ -0.23
CAPN1-213ENST00000527897 CCDC80Q76M96 950 aa13.59□□□□□ -0.23
CAPN1-213ENST00000527897 TSPYL5Q86VY4 417 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-213ENST00000527897 PIK3C3Q8NEB9 887 aa13.59□□□□□ -0.23
CAPN1-213ENST00000527897 OR6S1Q8NH40 331 aa13.59□□□□□ -0.23
CAPN1-213ENST00000527897 ZNF583Q96ND8 569 aa13.59□□□□□ -0.23
CAPN1-213ENST00000527897 ZNF317Q96PQ6 595 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-213ENST00000527897 OR2M2Q96R28 347 aa13.59□□□□□ -0.23
CAPN1-213ENST00000527897 LINC00470Q9BZP3 86 aa13.59□□□□□ -0.23
CAPN1-213ENST00000527897 FKRPQ9H9S5 495 aa13.59□□□□□ -0.23
CAPN1-213ENST00000527897 MED29Q9NX70 200 aa13.59□□□□□ -0.23
CAPN1-213ENST00000527897 NF1P21359 2839 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 NIPBLQ6KC79 2804 aaeCLIP13.58□□□□□ -0.24
CAPN1-213ENST00000527897 FAM220BPB1ANY3 271 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 ATP6V1G2-DDX39BF2Z307 99 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 CCDC22O60826 627 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 TMCC2O75069 709 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 SEC14L2O76054 403 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 ZNF432O94892 652 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 UMPSP11172 480 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 CAPZA2P47755 286 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 OR1E2P47887 323 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 TAS2R41P59536 307 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 ARF1P84077 181 aaKnown RBP13.58□□□□□ -0.24
CAPN1-213ENST00000527897 VEZF1Q14119 521 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 CEACAM16Q2WEN9 425 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 AGAP6Q5VW22 663 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 CLEC9AQ6UXN8 241 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 B3GLCTQ6Y288 498 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 BIVMQ86UB2 503 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 FBXL14Q8N1E6 418 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 SCAIQ8N9R8 606 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 ADPRHL1Q8NDY3 354 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 OR2T12Q8NG77 320 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 RP9Q8TA86 221 aaKnown RBP13.58□□□□□ -0.24
CAPN1-213ENST00000527897 BCL2L2Q92843 193 aaPredicted RBP13.58□□□□□ -0.24
CAPN1-213ENST00000527897 SLC41A3Q96GZ6 507 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 TXNDC15Q96J42 360 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 TPD52L3Q96J77 140 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 KCNS3Q9BQ31 491 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 ELAC2Q9BQ52 826 aaKnown RBP13.58□□□□□ -0.24
CAPN1-213ENST00000527897 TRAF4Q9BUZ4 470 aaPredicted RBP13.58□□□□□ -0.24
CAPN1-213ENST00000527897 CRLF2Q9HC73 371 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 GPR35Q9HC97 309 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 MRPL39Q9NYK5 338 aaKnown RBP13.58□□□□□ -0.24
CAPN1-213ENST00000527897 BAG5Q9UL15 447 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 MOKQ9UQ07 419 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 PLCE1Q9P212 2302 aa13.58□□□□□ -0.24
CAPN1-213ENST00000527897 ELOVL7A1L3X0 281 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 240.2 ms