RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 MPGP29372 298 aa11.79□□□□□ -0.52
CAPN1-209ENST00000527469 YAP1P46937 504 aaKnown RBP11.79□□□□□ -0.52
CAPN1-209ENST00000527469 SLC25A3Q00325 362 aa11.79□□□□□ -0.52
CAPN1-209ENST00000527469 ZNF74Q16587 644 aa11.79□□□□□ -0.52
CAPN1-209ENST00000527469 GLYATQ6IB77 296 aa11.79□□□□□ -0.52
CAPN1-209ENST00000527469 KLHL17Q6TDP4 642 aa11.79□□□□□ -0.52
CAPN1-209ENST00000527469 PAMR1Q6UXH9 720 aa11.79□□□□□ -0.52
CAPN1-209ENST00000527469 WDR88Q6ZMY6 472 aa11.79□□□□□ -0.52
CAPN1-209ENST00000527469 CBLL1Q75N03 491 aa11.79□□□□□ -0.52
CAPN1-209ENST00000527469 DEFB107AQ8IZN7 70 aa11.79□□□□□ -0.52
CAPN1-209ENST00000527469 OR52N5Q8NH56 324 aa11.79□□□□□ -0.52
CAPN1-209ENST00000527469 TMEM255BQ8WV15 326 aa11.79□□□□□ -0.52
CAPN1-209ENST00000527469 TMEM239Q8WW34 195 aa11.79□□□□□ -0.52
CAPN1-209ENST00000527469 NSL1Q96IY1 281 aa11.79□□□□□ -0.52
CAPN1-209ENST00000527469 ALKBH3Q96Q83 286 aaPredicted RBP11.79□□□□□ -0.52
CAPN1-209ENST00000527469 CDRT15Q96T59 188 aa11.79□□□□□ -0.52
CAPN1-209ENST00000527469 LIME1Q9H400 295 aa11.79□□□□□ -0.52
CAPN1-209ENST00000527469 B3GAT2Q9NPZ5 323 aa11.79□□□□□ -0.52
CAPN1-209ENST00000527469 MAGEL2Q9UJ55 1249 aa11.79□□□□□ -0.52
CAPN1-209ENST00000527469 ZNF229Q9UJW7 825 aa11.79□□□□□ -0.52
CAPN1-209ENST00000527469 SAMD4AQ9UPU9 718 aaKnown RBP11.79□□□□□ -0.52
CAPN1-209ENST00000527469 OTOGQ6ZRI0 2925 aa11.79□□□□□ -0.52
CAPN1-209ENST00000527469 ROS1P08922 2347 aa11.78□□□□□ -0.52
CAPN1-209ENST00000527469 LOC102725191A0A1B0GVB3 256 aa11.78□□□□□ -0.52
CAPN1-209ENST00000527469 PLPP3O14495 311 aa11.78□□□□□ -0.52
CAPN1-209ENST00000527469 SIAH2O43255 324 aa11.78□□□□□ -0.52
CAPN1-209ENST00000527469 KLF4O43474 513 aa11.78□□□□□ -0.52
CAPN1-209ENST00000527469 LYPD3O95274 346 aa11.78□□□□□ -0.52
CAPN1-209ENST00000527469 MT-ND1P03886 318 aa11.78□□□□□ -0.52
CAPN1-209ENST00000527469 ITGA5P08648 1049 aa11.78□□□□□ -0.52
CAPN1-209ENST00000527469 ART1P52961 327 aa11.78□□□□□ -0.52
CAPN1-209ENST00000527469 LTBQ06643 244 aa11.78□□□□□ -0.52
CAPN1-209ENST00000527469 TRAM2Q15035 370 aa11.78□□□□□ -0.52
CAPN1-209ENST00000527469 CARD17Q5XLA6 110 aa11.78□□□□□ -0.52
CAPN1-209ENST00000527469 ZNF704Q6ZNC4 412 aaPredicted RBP11.78□□□□□ -0.52
CAPN1-209ENST00000527469 PXKQ7Z7A4 578 aa11.78□□□□□ -0.52
CAPN1-209ENST00000527469 TSPYL5Q86VY4 417 aaPredicted RBP11.78□□□□□ -0.52
CAPN1-209ENST00000527469 NKAIN4Q8IVV8 208 aa11.78□□□□□ -0.52
CAPN1-209ENST00000527469 C17orf78Q8N4C9 275 aa11.78□□□□□ -0.52
CAPN1-209ENST00000527469 FITM2Q8N6M3 262 aa11.78□□□□□ -0.52
CAPN1-209ENST00000527469 FAM156AQ8NDB6 213 aa11.78□□□□□ -0.52
CAPN1-209ENST00000527469 C1orf162Q8NEQ5 155 aaPredicted RBP11.78□□□□□ -0.52
CAPN1-209ENST00000527469 ANKK1Q8NFD2 765 aa11.78□□□□□ -0.52
CAPN1-209ENST00000527469 SGTBQ96EQ0 304 aa11.78□□□□□ -0.52
CAPN1-209ENST00000527469 PLEKHF2Q9H8W4 249 aa11.78□□□□□ -0.52
CAPN1-209ENST00000527469 B3GAT1Q9P2W7 334 aa11.78□□□□□ -0.52
CAPN1-209ENST00000527469 RNF115Q9Y4L5 304 aa11.78□□□□□ -0.52
CAPN1-209ENST00000527469 MAGED1Q9Y5V3 778 aaPredicted RBP11.78□□□□□ -0.52
CAPN1-209ENST00000527469 A0A1W2PR80 420 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 B2RBV5 119 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 MS4A18H0YCH9 400 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 BLOC1S5-TXNDC5H3BN57 136 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 TRAF3IP2O43734 574 aaPredicted RBP11.77□□□□□ -0.53
CAPN1-209ENST00000527469 FZD7O75084 574 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 WNT11O96014 354 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 HPRP00739 348 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 HSD17B1P14061 328 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 ZNF83P51522 516 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 IST1P53990 364 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 SH3BGRP55822 239 aaPredicted RBP11.77□□□□□ -0.53
CAPN1-209ENST00000527469 UBE2NP61088 152 aaKnown RBP11.77□□□□□ -0.53
CAPN1-209ENST00000527469 ROR2Q01974 943 aaKnown RBP11.77□□□□□ -0.53
CAPN1-209ENST00000527469 BSPH1Q075Z2 132 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 GABRA6Q16445 453 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 MS4A18Q3C1V0 323 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 SPATS1Q496A3 300 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 TMEM108Q6UXF1 575 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 RRM2BQ7LG56 351 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 OFCC1Q8IZS5 231 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 OR6N1Q8NGY5 312 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 PFN4Q8NHR9 129 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 MCUR1Q96AQ8 359 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 NSMCE2Q96MF7 247 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 HS3ST6Q96QI5 342 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 OR2M2Q96R28 347 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 PRSS27Q9BQR3 290 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 ZNF426Q9BUY5 554 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 LINC00470Q9BZP3 86 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 AMBRA1Q9C0C7 1298 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 CCM2LQ9NUG4 571 aaPredicted RBP11.77□□□□□ -0.53
CAPN1-209ENST00000527469 RHCGQ9UBD6 479 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 AMDHD2Q9Y303 409 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 V9GYQ6 96 aa11.77□□□□□ -0.53
CAPN1-209ENST00000527469 MCIDASD6RGH6 385 aa11.76□□□□□ -0.53
CAPN1-209ENST00000527469 M0R1B8 84 aa11.76□□□□□ -0.53
CAPN1-209ENST00000527469 M0R3G1 203 aa11.76□□□□□ -0.53
CAPN1-209ENST00000527469 PDLIM1O00151 329 aa11.76□□□□□ -0.53
CAPN1-209ENST00000527469 UPK3AO75631 287 aa11.76□□□□□ -0.53
CAPN1-209ENST00000527469 IFI30P13284 250 aa11.76□□□□□ -0.53
CAPN1-209ENST00000527469 FUT1P19526 365 aa11.76□□□□□ -0.53
CAPN1-209ENST00000527469 CALB2P22676 271 aa11.76□□□□□ -0.53
CAPN1-209ENST00000527469 UGT2B15P54855 530 aa11.76□□□□□ -0.53
CAPN1-209ENST00000527469 FOXG1P55316 489 aaPredicted RBP11.76□□□□□ -0.53
CAPN1-209ENST00000527469 PRPS1P60891 318 aa11.76□□□□□ -0.53
CAPN1-209ENST00000527469 LGALS3BPQ08380 585 aa11.76□□□□□ -0.53
CAPN1-209ENST00000527469 ACKR1Q16570 336 aa11.76□□□□□ -0.53
CAPN1-209ENST00000527469 NCMAPQ5T1S8 102 aa11.76□□□□□ -0.53
CAPN1-209ENST00000527469 ZNF730Q6ZMV8 503 aa11.76□□□□□ -0.53
CAPN1-209ENST00000527469 C20orf204Q6ZNR8 217 aa11.76□□□□□ -0.53
CAPN1-209ENST00000527469 CDK20Q8IZL9 346 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms