RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 HIKESHIQ53FT3 197 aa11.7□□□□□ -0.54
CAPN1-207ENST00000527189 B3GLCTQ6Y288 498 aa11.7□□□□□ -0.54
CAPN1-207ENST00000527189 CPLX4Q7Z7G2 160 aa11.7□□□□□ -0.54
CAPN1-207ENST00000527189 RANBP3LQ86VV4 465 aaPredicted RBP11.7□□□□□ -0.54
CAPN1-207ENST00000527189 ARMC8Q8IUR7 673 aa11.7□□□□□ -0.54
CAPN1-207ENST00000527189 SLC30A8Q8IWU4 369 aa11.7□□□□□ -0.54
CAPN1-207ENST00000527189 CCDC36Q8IYA8 594 aa11.7□□□□□ -0.54
CAPN1-207ENST00000527189 KDM8Q8N371 416 aa11.7□□□□□ -0.54
CAPN1-207ENST00000527189 SCAIQ8N9R8 606 aa11.7□□□□□ -0.54
CAPN1-207ENST00000527189 OR10H5Q8NGA6 315 aa11.7□□□□□ -0.54
CAPN1-207ENST00000527189 BCAS4Q8TDM0 211 aa11.7□□□□□ -0.54
CAPN1-207ENST00000527189 SLC41A3Q96GZ6 507 aa11.7□□□□□ -0.54
CAPN1-207ENST00000527189 ANKRD27Q96NW4 1050 aa11.7□□□□□ -0.54
CAPN1-207ENST00000527189 CPPED1Q9BRF8 314 aaPredicted RBP11.7□□□□□ -0.54
CAPN1-207ENST00000527189 KATNB1Q9BVA0 655 aa11.7□□□□□ -0.54
CAPN1-207ENST00000527189 ZNF385DQ9H6B1 395 aa11.7□□□□□ -0.54
CAPN1-207ENST00000527189 MRGBPQ9NV56 204 aa11.7□□□□□ -0.54
CAPN1-207ENST00000527189 B3GAT1Q9P2W7 334 aa11.7□□□□□ -0.54
CAPN1-207ENST00000527189 ATP23Q9Y6H3 246 aa11.7□□□□□ -0.54
CAPN1-207ENST00000527189 ANK2Q01484 3957 aa11.69□□□□□ -0.54
CAPN1-207ENST00000527189 IGKV1D-42A0A075B6H8 117 aa11.69□□□□□ -0.54
CAPN1-207ENST00000527189 A0A0B4J2E0 115 aa11.69□□□□□ -0.54
CAPN1-207ENST00000527189 A0A1B0GX12 115 aa11.69□□□□□ -0.54
CAPN1-207ENST00000527189 GMNCA6NCL1 334 aa11.69□□□□□ -0.54
CAPN1-207ENST00000527189 INAFM1C9JVW0 142 aa11.69□□□□□ -0.54
CAPN1-207ENST00000527189 M0R082 166 aa11.69□□□□□ -0.54
CAPN1-207ENST00000527189 ANGPT2O15123 496 aa11.69□□□□□ -0.54
CAPN1-207ENST00000527189 TLX2O43763 284 aaPredicted RBP11.69□□□□□ -0.54
CAPN1-207ENST00000527189 SSX4O60224 188 aa11.69□□□□□ -0.54
CAPN1-207ENST00000527189 EDF1O60869 148 aaKnown RBP11.69□□□□□ -0.54
CAPN1-207ENST00000527189 UPK3AO75631 287 aa11.69□□□□□ -0.54
CAPN1-207ENST00000527189 LGI1O95970 557 aa11.69□□□□□ -0.54
CAPN1-207ENST00000527189 CRYAAP02489 173 aa11.69□□□□□ -0.54
CAPN1-207ENST00000527189 TP53P04637 393 aaPredicted RBP11.69□□□□□ -0.54
CAPN1-207ENST00000527189 PCSK6P29122 969 aa11.69□□□□□ -0.54
CAPN1-207ENST00000527189 GRPRP30550 384 aa11.69□□□□□ -0.54
CAPN1-207ENST00000527189 NUDT6P53370 316 aa11.69□□□□□ -0.54
CAPN1-207ENST00000527189 PCBP3P57721 371 aaKnown RBP11.69□□□□□ -0.54
CAPN1-207ENST00000527189 ROR2Q01974 943 aaKnown RBP11.69□□□□□ -0.54
CAPN1-207ENST00000527189 ZNF613Q6PF04 617 aa11.69□□□□□ -0.54
CAPN1-207ENST00000527189 CLEC2AQ6UVW9 174 aa11.69□□□□□ -0.54
CAPN1-207ENST00000527189 CXXC5Q7LFL8 322 aaKnown RBP11.69□□□□□ -0.54
CAPN1-207ENST00000527189 COMTD1Q86VU5 262 aa11.69□□□□□ -0.54
CAPN1-207ENST00000527189 ANKS4BQ8N8V4 417 aa11.69□□□□□ -0.54
CAPN1-207ENST00000527189 PIK3C3Q8NEB9 887 aa11.69□□□□□ -0.54
CAPN1-207ENST00000527189 ZNF417Q8TAU3 575 aa11.69□□□□□ -0.54
CAPN1-207ENST00000527189 LRR1Q96L50 414 aa11.69□□□□□ -0.54
CAPN1-207ENST00000527189 SLC38A2Q96QD8 506 aa11.69□□□□□ -0.54
CAPN1-207ENST00000527189 ZNF587Q96SQ5 575 aaPredicted RBP11.69□□□□□ -0.54
CAPN1-207ENST00000527189 CGREF1Q99674 301 aa11.69□□□□□ -0.54
CAPN1-207ENST00000527189 KCNS3Q9BQ31 491 aa11.69□□□□□ -0.54
CAPN1-207ENST00000527189 TMEM43Q9BTV4 400 aa11.69□□□□□ -0.54
CAPN1-207ENST00000527189 KLHL14Q9P2G3 628 aa11.69□□□□□ -0.54
CAPN1-207ENST00000527189 FBXO9Q9UK97 447 aaPredicted RBP11.69□□□□□ -0.54
CAPN1-207ENST00000527189 IGHV1-18A0A0C4DH31 117 aa11.68□□□□□ -0.54
CAPN1-207ENST00000527189 MS4A18H0YCH9 400 aa11.68□□□□□ -0.54
CAPN1-207ENST00000527189 M0QX08 132 aa11.68□□□□□ -0.54
CAPN1-207ENST00000527189 EBAG9O00559 213 aa11.68□□□□□ -0.54
CAPN1-207ENST00000527189 TPST2O60704 377 aa11.68□□□□□ -0.54
CAPN1-207ENST00000527189 IGKV3-15P01624 115 aa11.68□□□□□ -0.54
CAPN1-207ENST00000527189 IGLV1-44P01699 117 aa11.68□□□□□ -0.54
CAPN1-207ENST00000527189 CSF3P09919 207 aa11.68□□□□□ -0.54
CAPN1-207ENST00000527189 PTNP21246 168 aa11.68□□□□□ -0.54
CAPN1-207ENST00000527189 KRTAP1-1Q07627 177 aa11.68□□□□□ -0.54
CAPN1-207ENST00000527189 DMTNQ08495 405 aa11.68□□□□□ -0.54
CAPN1-207ENST00000527189 SWI5Q1ZZU3 235 aa11.68□□□□□ -0.54
CAPN1-207ENST00000527189 MS4A18Q3C1V0 323 aa11.68□□□□□ -0.54
CAPN1-207ENST00000527189 LINC00114Q6XXX2 140 aa11.68□□□□□ -0.54
CAPN1-207ENST00000527189 LINGO2Q7L985 606 aa11.68□□□□□ -0.54
CAPN1-207ENST00000527189 DHDDSQ86SQ9 333 aa11.68□□□□□ -0.54
CAPN1-207ENST00000527189 PATL1Q86TB9 770 aaKnown RBP11.68□□□□□ -0.54
CAPN1-207ENST00000527189 PTOV1Q86YD1 416 aa11.68□□□□□ -0.54
CAPN1-207ENST00000527189 GPR137CQ8N3F9 429 aa11.68□□□□□ -0.54
CAPN1-207ENST00000527189 ALKBH3Q96Q83 286 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-207ENST00000527189 PRR14Q9BWN1 585 aa11.68□□□□□ -0.54
CAPN1-207ENST00000527189 ASPNQ9BXN1 380 aa11.68□□□□□ -0.54
CAPN1-207ENST00000527189 KAT8Q9H7Z6 458 aaKnown RBP11.68□□□□□ -0.54
CAPN1-207ENST00000527189 MRPL39Q9NYK5 338 aaKnown RBP11.68□□□□□ -0.54
CAPN1-207ENST00000527189 MOKQ9UQ07 419 aa11.68□□□□□ -0.54
CAPN1-207ENST00000527189 CUBNO60494 3623 aa11.68□□□□□ -0.54
CAPN1-207ENST00000527189 ERICH4A6NGS2 130 aa11.67□□□□□ -0.54
CAPN1-207ENST00000527189 VSTM5A8MXK1 200 aa11.67□□□□□ -0.54
CAPN1-207ENST00000527189 ATP6V1G2-DDX39BF2Z307 99 aa11.67□□□□□ -0.54
CAPN1-207ENST00000527189 CD5LO43866 347 aa11.67□□□□□ -0.54
CAPN1-207ENST00000527189 CRLF1O75462 422 aa11.67□□□□□ -0.54
CAPN1-207ENST00000527189 PDE5AO76074 875 aa11.67□□□□□ -0.54
CAPN1-207ENST00000527189 F12P00748 615 aaPredicted RBP11.67□□□□□ -0.54
CAPN1-207ENST00000527189 MT-ATP6P00846 226 aa11.67□□□□□ -0.54
CAPN1-207ENST00000527189 VIMP08670 466 aaKnown RBP11.67□□□□□ -0.54
CAPN1-207ENST00000527189 NQO1P15559 274 aaKnown RBP11.67□□□□□ -0.54
CAPN1-207ENST00000527189 CBR1P16152 277 aa11.67□□□□□ -0.54
CAPN1-207ENST00000527189 SLC25A16P16260 332 aa11.67□□□□□ -0.54
CAPN1-207ENST00000527189 AQP1P29972 269 aa11.67□□□□□ -0.54
CAPN1-207ENST00000527189 ARR3P36575 388 aa11.67□□□□□ -0.54
CAPN1-207ENST00000527189 EFNA4P52798 201 aa11.67□□□□□ -0.54
CAPN1-207ENST00000527189 CDH12P55289 794 aa11.67□□□□□ -0.54
CAPN1-207ENST00000527189 ARF1P84077 181 aaKnown RBP11.67□□□□□ -0.54
CAPN1-207ENST00000527189 LGALS3BPQ08380 585 aa11.67□□□□□ -0.54
CAPN1-207ENST00000527189 ZSCAN26Q16670 478 aa11.67□□□□□ -0.54
CAPN1-207ENST00000527189 DUSP7Q16829 419 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms