RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 EPHA3P29320 983 aa20.68■□□□□ 0.9
USP47-205ENST00000525257 IL1RL1Q01638 556 aa20.68■□□□□ 0.9
USP47-205ENST00000525257 BST1Q10588 318 aa20.68■□□□□ 0.9
USP47-205ENST00000525257 C1DQ13901 141 aaKnown RBP20.68■□□□□ 0.9
USP47-205ENST00000525257 GTDC1Q4AE62 458 aa20.68■□□□□ 0.9
USP47-205ENST00000525257 MEX3DQ86XN8 651 aaKnown RBP20.68■□□□□ 0.9
USP47-205ENST00000525257 OXGR1Q96P68 337 aa20.68■□□□□ 0.9
USP47-205ENST00000525257 ARMC7Q9H6L4 198 aa20.68■□□□□ 0.9
USP47-205ENST00000525257 SSU72Q9NP77 194 aaKnown RBP20.68■□□□□ 0.9
USP47-205ENST00000525257 MPP2Q14168 576 aa20.67■□□□□ 0.9
USP47-205ENST00000525257 ZNF311Q5JNZ3 666 aa20.67■□□□□ 0.9
USP47-205ENST00000525257 GLB1L3Q8NCI6 653 aaPredicted RBP20.67■□□□□ 0.9
USP47-205ENST00000525257 TPT1P8Q9HAU6 139 aa20.67■□□□□ 0.9
USP47-205ENST00000525257 USP22Q9UPT9 525 aa20.67■□□□□ 0.9
USP47-205ENST00000525257 CMAHPQ9Y471 501 aa20.67■□□□□ 0.9
USP47-205ENST00000525257 A0A0G2JPF8 293 aa20.66■□□□□ 0.9
USP47-205ENST00000525257 HNRNPCL2B2RXH8 293 aa20.66■□□□□ 0.9
USP47-205ENST00000525257 HNRNPCL3B7ZW38 293 aa20.66■□□□□ 0.9
USP47-205ENST00000525257 M0R082 166 aa20.66■□□□□ 0.9
USP47-205ENST00000525257 AIM2O14862 343 aa20.66■□□□□ 0.9
USP47-205ENST00000525257 HNRNPCL1O60812 293 aaKnown RBP20.66■□□□□ 0.9
USP47-205ENST00000525257 IL6P05231 212 aa20.66■□□□□ 0.9
USP47-205ENST00000525257 HNRNPCL4P0DMR1 293 aa20.66■□□□□ 0.9
USP47-205ENST00000525257 DVL1P1P54792 670 aaPredicted RBP20.66■□□□□ 0.9
USP47-205ENST00000525257 PIK3C3Q8NEB9 887 aa20.66■□□□□ 0.9
USP47-205ENST00000525257 ZNF417Q8TAU3 575 aa20.66■□□□□ 0.9
USP47-205ENST00000525257 VPS33AQ96AX1 596 aa20.66■□□□□ 0.9
USP47-205ENST00000525257 OR2M2Q96R28 347 aa20.66■□□□□ 0.9
USP47-205ENST00000525257 ZNF587Q96SQ5 575 aaPredicted RBP20.66■□□□□ 0.9
USP47-205ENST00000525257 PAIP2Q9BPZ3 127 aaKnown RBP20.66■□□□□ 0.9
USP47-205ENST00000525257 OCEL1Q9H607 264 aa20.66■□□□□ 0.9
USP47-205ENST00000525257 IFT52Q9Y366 437 aa20.66■□□□□ 0.9
USP47-205ENST00000525257 TMEM247A6NEH6 219 aa20.65■□□□□ 0.9
USP47-205ENST00000525257 ZNF99A8MXY4 864 aaPredicted RBP20.65■□□□□ 0.9
USP47-205ENST00000525257 M0R3G1 203 aa20.65■□□□□ 0.9
USP47-205ENST00000525257 CBLP22681 906 aa20.65■□□□□ 0.9
USP47-205ENST00000525257 GRPRP30550 384 aa20.65■□□□□ 0.9
USP47-205ENST00000525257 MSMPQ1L6U9 139 aa20.65■□□□□ 0.9
USP47-205ENST00000525257 PHYHD1Q5SRE7 291 aa20.65■□□□□ 0.9
USP47-205ENST00000525257 CARD17Q5XLA6 110 aa20.65■□□□□ 0.9
USP47-205ENST00000525257 UGT2A3Q6UWM9 527 aa20.65■□□□□ 0.9
USP47-205ENST00000525257 C12orf54Q6X4T0 127 aa20.65■□□□□ 0.9
USP47-205ENST00000525257 TMEM123Q8N131 208 aa20.65■□□□□ 0.9
USP47-205ENST00000525257 IL17RDQ8NFM7 739 aa20.65■□□□□ 0.9
USP47-205ENST00000525257 TAAR8Q969N4 342 aa20.65■□□□□ 0.9
USP47-205ENST00000525257 MS4A3Q96HJ5 214 aa20.65■□□□□ 0.9
USP47-205ENST00000525257 MRPL37Q9BZE1 423 aaKnown RBP20.65■□□□□ 0.9
USP47-205ENST00000525257 KCNK9Q9NPC2 374 aa20.65■□□□□ 0.9
USP47-205ENST00000525257 RPS6KB2Q9UBS0 482 aa20.65■□□□□ 0.9
USP47-205ENST00000525257 METRNQ9UJH8 293 aa20.65■□□□□ 0.9
USP47-205ENST00000525257 TRAF3IP2O43734 574 aaPredicted RBP20.64■□□□□ 0.89
USP47-205ENST00000525257 AKAP8O43823 692 aaKnown RBP20.64■□□□□ 0.89
USP47-205ENST00000525257 SLC22A3O75751 556 aa20.64■□□□□ 0.89
USP47-205ENST00000525257 HLA-HP01893 362 aa20.64■□□□□ 0.89
USP47-205ENST00000525257 ZCCHC18P0CG32 403 aa20.64■□□□□ 0.89
USP47-205ENST00000525257 PCMT1P22061 227 aa20.64■□□□□ 0.89
USP47-205ENST00000525257 NR4A1P22736 598 aa20.64■□□□□ 0.89
USP47-205ENST00000525257 RUNX1T1Q06455 604 aa20.64■□□□□ 0.89
USP47-205ENST00000525257 PDCD4Q53EL6 469 aaKnown RBP20.64■□□□□ 0.89
USP47-205ENST00000525257 NXNQ6DKJ4 435 aa20.64■□□□□ 0.89
USP47-205ENST00000525257 GLCCI1Q86VQ1 547 aa20.64■□□□□ 0.89
USP47-205ENST00000525257 CCDC36Q8IYA8 594 aa20.64■□□□□ 0.89
USP47-205ENST00000525257 MRPL24Q96A35 216 aaKnown RBP20.64■□□□□ 0.89
USP47-205ENST00000525257 ZBTB9Q96C00 473 aa20.64■□□□□ 0.89
USP47-205ENST00000525257 CENPHQ9H3R5 247 aa20.64■□□□□ 0.89
USP47-205ENST00000525257 NARFLQ9H6Q4 476 aa20.64■□□□□ 0.89
USP47-205ENST00000525257 B4DSR2 109 aa20.63■□□□□ 0.89
USP47-205ENST00000525257 HDAC3O15379 428 aa20.63■□□□□ 0.89
USP47-205ENST00000525257 SYNGR3O43761 229 aa20.63■□□□□ 0.89
USP47-205ENST00000525257 FZD7O75084 574 aa20.63■□□□□ 0.89
USP47-205ENST00000525257 VENTXO95231 258 aa20.63■□□□□ 0.89
USP47-205ENST00000525257 NUDT7P0C024 238 aa20.63■□□□□ 0.89
USP47-205ENST00000525257 KITP10721 976 aa20.63■□□□□ 0.89
USP47-205ENST00000525257 CD79AP11912 226 aa20.63■□□□□ 0.89
USP47-205ENST00000525257 IDO1P14902 403 aa20.63■□□□□ 0.89
USP47-205ENST00000525257 TCN1P20061 433 aaPredicted RBP20.63■□□□□ 0.89
USP47-205ENST00000525257 FAM69AQ5T7M9 428 aa20.63■□□□□ 0.89
USP47-205ENST00000525257 C6orf89Q6UWU4 347 aa20.63■□□□□ 0.89
USP47-205ENST00000525257 CARM1Q86X55 608 aa20.63■□□□□ 0.89
USP47-205ENST00000525257 SLC38A4Q969I6 547 aa20.63■□□□□ 0.89
USP47-205ENST00000525257 MAL2Q969L2 176 aa20.63■□□□□ 0.89
USP47-205ENST00000525257 METTL17Q9H7H0 456 aaPredicted RBP20.63■□□□□ 0.89
USP47-205ENST00000525257 THUMPD1Q9NXG2 353 aaKnown RBP20.63■□□□□ 0.89
USP47-205ENST00000525257 B3GNT2Q9NY97 397 aa20.63■□□□□ 0.89
USP47-205ENST00000525257 REV1Q9UBZ9 1251 aa20.63■□□□□ 0.89
USP47-205ENST00000525257 TRPC5OSA6NMA1 111 aa20.62■□□□□ 0.89
USP47-205ENST00000525257 M0R233 179 aa20.62■□□□□ 0.89
USP47-205ENST00000525257 OR2T1O43869 369 aa20.62■□□□□ 0.89
USP47-205ENST00000525257 CFPP27918 469 aa20.62■□□□□ 0.89
USP47-205ENST00000525257 POU3F1Q03052 451 aaPredicted RBP20.62■□□□□ 0.89
USP47-205ENST00000525257 PIGFQ07326 219 aa20.62■□□□□ 0.89
USP47-205ENST00000525257 GSG1Q2KHT4 349 aa20.62■□□□□ 0.89
USP47-205ENST00000525257 ELFN2Q5R3F8 820 aa20.62■□□□□ 0.89
USP47-205ENST00000525257 C6orf10Q5SRN2 563 aa20.62■□□□□ 0.89
USP47-205ENST00000525257 H1FNTQ75WM6 255 aaPredicted RBP20.62■□□□□ 0.89
USP47-205ENST00000525257 SLC35B4Q969S0 331 aa20.62■□□□□ 0.89
USP47-205ENST00000525257 ITCHQ96J02 903 aa20.62■□□□□ 0.89
USP47-205ENST00000525257 SYT3Q9BQG1 590 aa20.62■□□□□ 0.89
USP47-205ENST00000525257 EMC6Q9BV81 110 aa20.62■□□□□ 0.89
USP47-205ENST00000525257 PLA2G12AQ9BZM1 189 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms