RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 DHRS9Q9BPW9 319 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 SRSF8Q9BRL6 282 aaKnown RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 CARD6Q9BX69 1037 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 DEFB126Q9BYW3 111 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 ROGDIQ9GZN7 287 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 RACGAP1Q9H0H5 632 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 WWP1Q9H0M0 922 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 ATG10Q9H0Y0 220 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 DPAGT1Q9H3H5 408 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 MRPL47Q9HD33 250 aaKnown RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 FAM114A2Q9NRY5 505 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 PARVAQ9NVD7 372 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 NECAP2Q9NVZ3 263 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 RBM22Q9NW64 420 aaKnown RBP eCLIP1.25□□□□□ -2.21
CD44-212ENST00000524922 TEX10Q9NXF1 929 aaPredicted RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 NDE1Q9NXR1 346 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 SPRR3Q9UBC9 169 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 CTSZQ9UBR2 303 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 IL20RAQ9UHF4 553 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 FAM153AQ9UHL3 310 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 RSPH14Q9UHP6 348 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 CD84Q9UIB8 345 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 ANAPC7Q9UJX3 599 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 CORO1CQ9ULV4 474 aaPredicted RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 MRPS33Q9Y291 106 aaKnown RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 ASF1AQ9Y294 204 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 C15orf41Q9Y2V0 281 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 GRIP1Q9Y3R0 1128 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 MAGED1Q9Y5V3 778 aaPredicted RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 POMT1Q9Y6A1 747 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 CHCHD2Q9Y6H1 151 aaPredicted RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 MALRD1Q5VYJ5 2156 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 FRAS1Q86XX4 4008 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 FREM3P0C091 2139 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 HMCN2Q8NDA2 5059 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 MED12Q93074 2177 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 CR1P17927 2039 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 SCN2AQ99250 2005 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 SYNJ2BP-COX16A0A087WUM0 186 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 IGLV3-32A0A0A0MS00 114 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 A0A0G2JMP0 313 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 A0A0X1KG70 313 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 A0A1W2PPV9 198 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 BTNL10A8MVZ5 291 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 HACD1B0YJ81 288 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 EEF1E1-BLOC1S5C9J1V9 151 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 G3V2L1 256 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 H0YGG7 62 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 GOLGA8TH3BQL2 631 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 AP3B1O00203 1094 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 DFFAO00273 331 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 POLR2DO15514 142 aaKnown RBP1.24□□□□□ -2.21
CD44-212ENST00000524922 EEF1E1O43324 174 aaKnown RBP1.24□□□□□ -2.21
CD44-212ENST00000524922 SSX4O60224 188 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 CDC40O60508 579 aaKnown RBP eCLIP1.24□□□□□ -2.21
CD44-212ENST00000524922 GALR3O60755 368 aaPredicted RBP1.24□□□□□ -2.21
CD44-212ENST00000524922 GLRA3O75311 464 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 PSIP1O75475 530 aaKnown RBP1.24□□□□□ -2.21
CD44-212ENST00000524922 ERLIN1O75477 346 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 GRAP2O75791 330 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 CBR3O75828 277 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 CDK2AP2O75956 126 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 RSL1D1O76021 490 aaKnown RBP1.24□□□□□ -2.21
CD44-212ENST00000524922 ANXA9O76027 345 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 TPPPO94811 219 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 CLDN9O95484 217 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 BCL10O95999 233 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 PNPP00491 289 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 CD8AP01732 235 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 KRT6AP02538 564 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 KRT6BP04259 564 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 APOA4P06727 396 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 ERCC1P07992 297 aaPredicted RBP1.24□□□□□ -2.21
CD44-212ENST00000524922 SOD3P08294 240 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 OR56A5P0C7T3 313 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 CCDC166P0CW27 439 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 TPBGLP0DKB5 382 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 RNH1P13489 461 aaKnown RBP1.24□□□□□ -2.21
CD44-212ENST00000524922 UCHL3P15374 230 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 TNNI3P19429 210 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 COX5AP20674 150 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 TNFAIP3P21580 790 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 PIK3R1P27986 724 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 ELK4P28324 431 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 SERPINB1P30740 379 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 LCN1P31025 176 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 ACVR1BP36896 505 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 SRP14P37108 136 aaKnown RBP1.24□□□□□ -2.21
CD44-212ENST00000524922 MAGEA5P43359 124 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 OR1D4P47884 311 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 KRT6CP48668 564 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 ARSEP51690 589 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 ZNF140P52738 457 aaPredicted RBP1.24□□□□□ -2.21
CD44-212ENST00000524922 EFNA3P52797 238 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 TMEM33P57088 247 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 OR4D2P58180 307 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 KCNJ2P63252 427 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 MRPS22P82650 360 aaKnown RBP1.24□□□□□ -2.21
CD44-212ENST00000524922 PLGLB1Q02325 96 aa1.24□□□□□ -2.21
CD44-212ENST00000524922 ACTN3Q08043 901 aaPredicted RBP1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms