RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-223	ENST00000523125	ROR2	Q01974	943 aa	Known RBP	10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	NFYC	Q13952	458 aa		10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	CYP51A1	Q16850	503 aa		10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	SWT1	Q5T5J6	900 aa	Known RBP	10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	NANOGP8	Q6NSW7	305 aa		10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	CGB2	Q6NT52	195 aa		10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	ZNF544	Q6NX49	715 aa		10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	ANKRD16	Q6P6B7	361 aa		10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	KLHL24	Q6TFL4	600 aa		10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	TSPYL5	Q86VY4	417 aa	Predicted RBP	10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	RBM45	Q8IUH3	476 aa	Known RBP	10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	FBXL14	Q8N1E6	418 aa		10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	DEPDC4	Q8N2C3	294 aa		10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	ADPRHL1	Q8NDY3	354 aa		10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	ANKK1	Q8NFD2	765 aa		10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	OR6T1	Q8NGN1	323 aa		10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	MAGEE2	Q8TD90	523 aa	Predicted RBP	10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	OR2M2	Q96R28	347 aa		10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	TMEM43	Q9BTV4	400 aa		10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	TMEM120A	Q9BXJ8	343 aa		10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	EVA1A	Q9H8M9	152 aa		10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	NANOG	Q9H9S0	305 aa		10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	FKRP	Q9H9S5	495 aa		10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	TMEM27	Q9HBJ8	222 aa		10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	GPR35	Q9HC97	309 aa		10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	OBP2B	Q9NPH6	170 aa		10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	ZNF446	Q9NWS9	450 aa		10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	CRNN	Q9UBG3	495 aa	Predicted RBP	10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	MOK	Q9UQ07	419 aa		10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125	ATP23	Q9Y6H3	246 aa		10.79	□□□□□ -0.68
VEGFA-223	ENST00000523125		A0A096LPE4	126 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125		A0A1W2PPZ6	126 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	INAFM1	C9JVW0	142 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	LRRN3	E7EW58	273 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	FXYD1	O00168	92 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	SSX4	O60224	188 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	FMO6P	O60774	539 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	IGLV1-44	P01699	117 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	THY1	P04216	161 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	PCSK6	P29122	969 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	APOBEC3A	P31941	199 aa	Predicted RBP	10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	PCGF2	P35227	344 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	SH3BGR	P55822	239 aa	Predicted RBP	10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	TUBA1B	P68363	451 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	TUBA4A	P68366	448 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	ARF1	P84077	181 aa	Known RBP	10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	C1D	Q13901	141 aa	Known RBP	10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	MFSD13A	Q14CX5	517 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	MST1L	Q2TV78	715 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	PHYHD1	Q5SRE7	291 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	ZNF613	Q6PF04	617 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	WDR88	Q6ZMY6	472 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	TUBA1A	Q71U36	451 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	RANBP3L	Q86VV4	465 aa	Predicted RBP	10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	SCAI	Q8N9R8	606 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	OR10A6	Q8NH74	314 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	RNF217	Q8TC41	542 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	HTRA1	Q92743	480 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	TAMM41	Q96BW9	452 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	HS6ST2	Q96MM7	605 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	ZNF317	Q96PQ6	595 aa	Predicted RBP	10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	SLC38A2	Q96QD8	506 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	MCHR1	Q99705	422 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	BARX1	Q9HBU1	254 aa	Predicted RBP	10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	MRPL39	Q9NYK5	338 aa	Known RBP	10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	SLC13A4	Q9UKG4	626 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	ANK3	Q12955	4377 aa	Known RBP	10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	SON	P18583	2426 aa	Known RBP	10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125	JMJD1C	Q15652	2540 aa		10.78	□□□□□ -0.68
VEGFA-223	ENST00000523125		A0A096LNT2	108 aa		10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	ZNF503-AS2	A6NEH8	195 aa		10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125		H7C417	338 aa		10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	PLPP3	O14495	311 aa		10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	CHP2	O43745	196 aa		10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	SLC43A1	O75387	559 aa		10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	HOXB1	P14653	301 aa	Predicted RBP	10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	SWI5	Q1ZZU3	235 aa		10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	TRMT5	Q32P41	509 aa	Known RBP	10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	C3orf36	Q3SXR2	165 aa		10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	RABL3	Q5HYI8	236 aa		10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	ENTPD8	Q5MY95	495 aa		10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	HMBOX1	Q6NT76	420 aa		10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	CCDC80	Q76M96	950 aa		10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	PATL1	Q86TB9	770 aa	Known RBP	10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	MYPOP	Q86VE0	399 aa	Predicted RBP	10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	CALHM3	Q86XJ0	350 aa		10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	PRIMA1	Q86XR5	153 aa		10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	SLC30A8	Q8IWU4	369 aa		10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	FAM169B	Q8N8A8	192 aa		10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	OR10H5	Q8NGA6	315 aa		10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	TXNDC15	Q96J42	360 aa		10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	ADAD1	Q96M93	576 aa	Known RBP	10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	EPYC	Q99645	322 aa		10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	EMC6	Q9BV81	110 aa		10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	PCDHAC1	Q9H158	963 aa		10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	SEC61A2	Q9H9S3	476 aa		10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	CRLF2	Q9HC73	371 aa		10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	FGFR1OP2	Q9NVK5	253 aa		10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	SELENON	Q9NZV5	590 aa		10.77	□□□□□ -0.69
VEGFA-223	ENST00000523125	CORIN	Q9Y5Q5	1042 aa		10.77	□□□□□ -0.69

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