RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 PTGDR2Q9Y5Y4 395 aa5.41□□□□□ -1.54
PABPC1-220ENST00000522658 ANK2Q01484 3957 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 NBEAL1Q6ZS30 2694 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 TMED7-TICAM2A0A0A6YYA0 188 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 IGHV1-18A0A0C4DH31 117 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 SMIM23A6NLE4 172 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 ZNF716A6NP11 495 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 FAM157AC9JC47 383 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 M0R233 179 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 PIP5K1BO14986 540 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 LSM1O15116 133 aaKnown RBP5.4□□□□□ -1.54
PABPC1-220ENST00000522658 EFNA2O43921 213 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 PEX11AO75192 247 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 SLU7O95391 586 aaKnown RBP5.4□□□□□ -1.54
PABPC1-220ENST00000522658 BCKDHAP12694 445 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 CPA3P15088 417 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 FAHP16930 419 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 NCF2P19878 526 aaPredicted RBP5.4□□□□□ -1.54
PABPC1-220ENST00000522658 PRPS1L1P21108 318 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 IDH2P48735 452 aaKnown RBP5.4□□□□□ -1.54
PABPC1-220ENST00000522658 MAP2K6P52564 334 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 SELENOVP59797 346 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 DNAJB13P59910 316 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 COPZ1P61923 177 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 NAAAQ02083 359 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 LGALS3BPQ08380 585 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 SNTB2Q13425 540 aaKnown RBP5.4□□□□□ -1.54
PABPC1-220ENST00000522658 DAG1Q14118 895 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 OR7A5Q15622 319 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 EFNB3Q15768 340 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 ADIPOQQ15848 244 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 ZNF141Q15928 474 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 WHAMMP3Q1A5X7 153 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 TBRG1Q3YBR2 411 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 FAM174BQ3ZCQ3 159 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 RFTN2Q52LD8 501 aaPredicted RBP5.4□□□□□ -1.54
PABPC1-220ENST00000522658 PRAMEF8Q5VWM4 474 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 PRAMEF7Q5VXH5 474 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 KRT80Q6KB66 452 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 FAHD2BQ6P2I3 314 aaPredicted RBP5.4□□□□□ -1.54
PABPC1-220ENST00000522658 NIPAL3Q6P499 406 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 PAQR6Q6TCH4 344 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 RBMS3Q6XE24 437 aaKnown RBP5.4□□□□□ -1.54
PABPC1-220ENST00000522658 TRMT10CQ7L0Y3 403 aaKnown RBP5.4□□□□□ -1.54
PABPC1-220ENST00000522658 GPR137CQ8N3F9 429 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 WDR31Q8NA23 367 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 OR9K2Q8NGE7 335 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 AGR3Q8TD06 166 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 SNX33Q8WV41 574 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 CKAP2Q8WWK9 683 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 XAGE5Q8WWM1 108 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 TMEM45BQ96B21 275 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 TMEM186Q96B77 213 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 RAB39BQ96DA2 213 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 AURKBQ96GD4 344 aaPredicted RBP5.4□□□□□ -1.54
PABPC1-220ENST00000522658 FAHD2AQ96GK7 314 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 LRRC37BQ96QE4 947 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 SDF2Q99470 211 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 ZNF350Q9GZX5 532 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 OR51I1Q9H343 314 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 TPK1Q9H3S4 243 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 GRPEL1Q9HAV7 217 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 CRLF2Q9HC73 371 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 POLE3Q9NRF9 147 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 HIF1ANQ9NWT6 349 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 ADPRHL2Q9NX46 363 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 TRAPPC4Q9Y296 219 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 TMED7Q9Y3B3 224 aa5.4□□□□□ -1.54
PABPC1-220ENST00000522658 A0A1W2PPW3 197 aa5.39□□□□□ -1.55
PABPC1-220ENST00000522658 TMEM247A6NEH6 219 aa5.39□□□□□ -1.55
PABPC1-220ENST00000522658 NPIPB8E9PQR5 432 aa5.39□□□□□ -1.55
PABPC1-220ENST00000522658 ZNF208O43345 1280 aa5.39□□□□□ -1.55
PABPC1-220ENST00000522658 TPD52L2O43399 206 aaKnown RBP5.39□□□□□ -1.55
PABPC1-220ENST00000522658 PPIHO43447 177 aaKnown RBP5.39□□□□□ -1.55
PABPC1-220ENST00000522658 SLC43A1O75387 559 aa5.39□□□□□ -1.55
PABPC1-220ENST00000522658 UGT2B17O75795 530 aa5.39□□□□□ -1.55
PABPC1-220ENST00000522658 VAMP5O95183 116 aa5.39□□□□□ -1.55
PABPC1-220ENST00000522658 LGI1O95970 557 aa5.39□□□□□ -1.55
PABPC1-220ENST00000522658 PNPP00491 289 aa5.39□□□□□ -1.55
PABPC1-220ENST00000522658 MSMBP08118 114 aa5.39□□□□□ -1.55
PABPC1-220ENST00000522658 ADRA2AP08913 450 aa5.39□□□□□ -1.55
PABPC1-220ENST00000522658 TACSTD2P09758 323 aa5.39□□□□□ -1.55
PABPC1-220ENST00000522658 CECR9P0C854 216 aa5.39□□□□□ -1.55
PABPC1-220ENST00000522658 LAMP1P11279 417 aa5.39□□□□□ -1.55
PABPC1-220ENST00000522658 IL7RP16871 459 aa5.39□□□□□ -1.55
PABPC1-220ENST00000522658 GIFP27352 417 aa5.39□□□□□ -1.55
PABPC1-220ENST00000522658 FOXG1P55316 489 aaPredicted RBP5.39□□□□□ -1.55
PABPC1-220ENST00000522658 KCNJ10P78508 379 aa5.39□□□□□ -1.55
PABPC1-220ENST00000522658 SLC25A3Q00325 362 aa5.39□□□□□ -1.55
PABPC1-220ENST00000522658 FOXE3Q13461 319 aa5.39□□□□□ -1.55
PABPC1-220ENST00000522658 CEACAM7Q14002 265 aa5.39□□□□□ -1.55
PABPC1-220ENST00000522658 PTGR1Q14914 329 aa5.39□□□□□ -1.55
PABPC1-220ENST00000522658 KIAA0040Q15053 153 aa5.39□□□□□ -1.55
PABPC1-220ENST00000522658 TRMT5Q32P41 509 aaKnown RBP5.39□□□□□ -1.55
PABPC1-220ENST00000522658 ARHGAP11BQ3KRB8 267 aa5.39□□□□□ -1.55
PABPC1-220ENST00000522658 C3orf36Q3SXR2 165 aa5.39□□□□□ -1.55
PABPC1-220ENST00000522658 ANXA8L1Q5VT79 327 aa5.39□□□□□ -1.55
PABPC1-220ENST00000522658 TNFAIP8L2Q6P589 184 aaPredicted RBP5.39□□□□□ -1.55
PABPC1-220ENST00000522658 ANKRD16Q6P6B7 361 aa5.39□□□□□ -1.55
PABPC1-220ENST00000522658 RNF165Q6ZSG1 346 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms