RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 SLC6A20Q9NP91 592 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 MED17Q9NVC6 651 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 ICKQ9UPZ9 632 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 POLHQ9Y253 713 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 ATP6V1G2-DDX39BF2Z307 99 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 GPR171O14626 319 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 FASLGP48023 281 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 SLC6A12P48065 614 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 ZNF91Q05481 1191 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 UBE2NLQ5JXB2 153 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 SLX4IPQ5VYV7 408 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 TMEM64Q6YI46 380 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 PAQR8Q8TEZ7 354 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 MZB1Q8WU39 189 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 PATE1Q8WXA2 126 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 ZNF707Q96C28 371 aaPredicted RBP14.97□□□□□ -0.01
USP42-207ENST00000521713 FAM71F1Q96KD3 344 aaPredicted RBP14.97□□□□□ -0.01
USP42-207ENST00000521713 A4GALTQ9NPC4 353 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 SLAMF8Q9P0V8 285 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 KIF25Q9UIL4 384 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 ARHGAP33O14559 1287 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 OPN1LWP04000 364 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 GAAP10253 952 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 VEGFCP49767 419 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 SLC26A5P58743 744 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 COL24A1Q17RW2 1714 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 Q6ZS52 159 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 SYNPRQ8TBG9 265 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 HRASLS5Q96KN8 279 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 STACQ99469 402 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 SGPP1Q9BX95 441 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 DNTTIP1Q9H147 329 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 PCDHGA6Q9Y5G7 932 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 PLSCR5A0PG75 271 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 AAED1Q7RTV5 226 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 RNF128Q8TEB7 428 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 RPL3LQ92901 407 aaKnown RBP14.97□□□□□ -0.01
USP42-207ENST00000521713 SH3BGRL2Q9UJC5 107 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 ADAM18Q9Y3Q7 739 aa14.97□□□□□ -0.01
USP42-207ENST00000521713 TRAV27A0A087WT01 109 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 H0YIG0 161 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 GIPRP48546 466 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 CAMK2DQ13557 499 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 TIGD3Q6B0B8 471 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 FNDC9Q8TBE3 224 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 SYNPO2LQ9H987 977 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 KCNS2Q9ULS6 477 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 COPS3Q9UNS2 423 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 SLC17A4Q9Y2C5 497 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 AK6Q9Y3D8 172 aaKnown RBP14.96□□□□□ -0.01
USP42-207ENST00000521713 HSBP1L1C9JCN9 74 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 GPR3P46089 330 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 CCL11P51671 97 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 ASTLQ6HA08 431 aaPredicted RBP14.96□□□□□ -0.01
USP42-207ENST00000521713 RTL6Q6ICC9 239 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 ZNF583Q96ND8 569 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 MICU1Q9BPX6 476 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 DUSP22Q9NRW4 184 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 MAN2C1Q9NTJ4 1040 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 A0A0A6YYH2 397 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 A6NJ64 397 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 SHOXO15266 292 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 UBL3O95164 117 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 MT-ND4P03905 459 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 M6PRP20645 277 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 TP53I3Q53FA7 332 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 AWAT2Q6E213 333 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 CELF2-AS1Q8N7Q2 184 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 OR9K2Q8NGE7 335 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 OLIG1Q8TAK6 271 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 ASB17Q8WXJ9 295 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 LIN37Q96GY3 246 aaPredicted RBP14.96□□□□□ -0.01
USP42-207ENST00000521713 TMEM38AQ9H6F2 299 aa14.96□□□□□ -0.01
USP42-207ENST00000521713 RP1L1Q8IWN7 2480 aaPredicted RBP14.96□□□□□ -0.02
USP42-207ENST00000521713 TRAV36DV7A0A075B6V5 113 aa14.95□□□□□ -0.02
USP42-207ENST00000521713 ITGB8P26012 769 aa14.95□□□□□ -0.02
USP42-207ENST00000521713 IL13RA1P78552 427 aa14.95□□□□□ -0.02
USP42-207ENST00000521713 ADARB1P78563 741 aaKnown RBP14.95□□□□□ -0.02
USP42-207ENST00000521713 LURAP1Q96LR2 239 aa14.95□□□□□ -0.02
USP42-207ENST00000521713 GSX2Q9BZM3 304 aa14.95□□□□□ -0.02
USP42-207ENST00000521713 TSPAN10Q9H1Z9 355 aaPredicted RBP14.95□□□□□ -0.02
USP42-207ENST00000521713 PRAMEF25A6NGN4 478 aa14.95□□□□□ -0.02
USP42-207ENST00000521713 LILRA5A6NI73 299 aa14.95□□□□□ -0.02
USP42-207ENST00000521713 NUDT19A8MXV4 375 aa14.95□□□□□ -0.02
USP42-207ENST00000521713 PRSS44E7EML9 344 aa14.95□□□□□ -0.02
USP42-207ENST00000521713 ST6GAL1P15907 406 aa14.95□□□□□ -0.02
USP42-207ENST00000521713 FKBP2P26885 142 aaKnown RBP14.95□□□□□ -0.02
USP42-207ENST00000521713 MTNR1BP49286 362 aa14.95□□□□□ -0.02
USP42-207ENST00000521713 TSSK4Q6SA08 328 aa14.95□□□□□ -0.02
USP42-207ENST00000521713 BEND4Q6ZU67 534 aa14.95□□□□□ -0.02
USP42-207ENST00000521713 SCARB1Q8WTV0 552 aa14.95□□□□□ -0.02
USP42-207ENST00000521713 GPR78Q96P69 363 aa14.95□□□□□ -0.02
USP42-207ENST00000521713 LOXHD1Q8IVV2 1947 aa14.95□□□□□ -0.02
USP42-207ENST00000521713 OR6C6A6NF89 314 aa14.95□□□□□ -0.02
USP42-207ENST00000521713 GABRPO00591 440 aa14.95□□□□□ -0.02
USP42-207ENST00000521713 SNRNP70P08621 437 aaKnown RBP14.95□□□□□ -0.02
USP42-207ENST00000521713 IDO2Q6ZQW0 420 aa14.95□□□□□ -0.02
USP42-207ENST00000521713 ENTHD1Q8IYW4 607 aa14.95□□□□□ -0.02
USP42-207ENST00000521713 PXT1Q8NFP0 134 aa14.95□□□□□ -0.02
USP42-207ENST00000521713 OR10K1Q8NGX5 313 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms