RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 MRM1Q6IN84 353 aaKnown RBP11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 STAC2Q6ZMT1 411 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 CMIPQ8IY22 773 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 STEAP2Q8NFT2 490 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 OR1S1Q8NH92 325 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 HAVCR2Q8TDQ0 301 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 C14orf105Q9NVL8 296 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 UPB1Q9UBR1 384 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 LAMP5Q9UJQ1 280 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 C13orf42A0A1B0GVH6 325 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 TSPAN11A1L157 253 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 F8W036 122 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 PIN1P1O15428 100 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 RAB3DO95716 219 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 AKAIN1P0CW23 69 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 MAPK3P27361 379 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 ADAM8P78325 824 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 BLOC1S1P78537 153 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 TNFRSF17Q02223 184 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 ARHGAP11BQ3KRB8 267 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 PSRC1Q6PGN9 363 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 UNQ6126/PRO20091Q6UXV3 157 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 HSD17B13Q7Z5P4 300 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 ZFP82Q8N141 532 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 TEX19Q8NA77 164 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 INO80EQ8NBZ0 244 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 BPIFCQ8NFQ6 507 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 HAVCR1Q96D42 359 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 RAB11FIP5Q9BXF6 653 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 CHST6Q9GZX3 395 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 SRMSQ9H3Y6 488 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 KCNK15Q9H427 330 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 POLMQ9NP87 494 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 MBNL1Q9NR56 388 aaKnown RBP11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 CPNE7Q9UBL6 633 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 A0A087WV48 116 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 C5orf51A6NDU8 294 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 A8MXK9 166 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 EEF1E1-BLOC1S5C9J1V9 151 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 GALR3O60755 368 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 CPMP14384 443 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 PPM1AP35813 382 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 P2RY2P41231 377 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 UBE2IP63279 158 aaKnown RBP11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 FLI1Q01543 452 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 MLF2Q15773 248 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 ARHGAP40Q5TG30 622 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 LIPNQ5VXI9 398 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 OLFML2AQ68BL7 652 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 TFAP2EQ6VUC0 442 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 SLC35F3Q8IY50 421 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 PNPLA2Q96AD5 504 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 TRIM43Q96BQ3 446 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 Q96M85 177 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 GMEB2Q9UKD1 530 aa11.76□□□□□ -0.53
TRAPPC9-208ENST00000520857 GPR31O00270 319 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 OGG1O15527 345 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 SULT1B1O43704 296 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 IL5P05113 134 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 FGF2P09038 288 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 CSF1P09603 554 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 ZNF10P21506 573 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 DLSTP36957 453 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 GRK6P43250 576 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 TMPRSS11FQ6ZWK6 438 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 ZNF765Q7L2R6 523 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 SFTPA1Q8IWL2 248 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 SYS1Q8N2H4 156 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 OR10Z1Q8NGY1 313 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 SLC2A12Q8TD20 617 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 ZNF707Q96C28 371 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 ZNF75AQ96N20 296 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 MICU1Q9BPX6 476 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 CCDC3Q9BQI4 270 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 ADAT1Q9BUB4 502 aaKnown RBP11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 ALG12Q9BV10 488 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 JAM3Q9BX67 310 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 ANAPC1Q9H1A4 1944 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 ZNF705EA8MWA4 302 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 SNAPC5O75971 98 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 ACRP10323 421 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 PGDP52209 483 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 EPHA4P54764 986 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 SCRN3Q0VDG4 424 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 Q499Y3 187 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 SEZ6L2Q6UXD5 910 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 NUDT18Q6ZVK8 323 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 CDRT4Q8N9R6 151 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 CHST4Q8NCG5 386 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 WFIKKN2Q8TEU8 576 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 MRPS24Q96EL2 167 aaKnown RBP11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 VRK1Q99986 396 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 KXD1Q9BQD3 176 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 SARGQ9BW04 601 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 DNTTIP1Q9H147 329 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 POFUT1Q9H488 388 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 TAS2R8Q9NYW2 309 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 ZNF223Q9UK11 482 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 EDARQ9UNE0 448 aa11.75□□□□□ -0.53
TRAPPC9-208ENST00000520857 TMEM82A0PJX8 343 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms