RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 C1DQ13901 141 aaKnown RBP17.06■□□□□ 0.32
PABPC1-215ENST00000520804 ALG10BQ5I7T1 473 aa17.06■□□□□ 0.32
PABPC1-215ENST00000520804 BEND6Q5SZJ8 279 aaPredicted RBP17.06■□□□□ 0.32
PABPC1-215ENST00000520804 REEP3Q6NUK4 255 aa17.06■□□□□ 0.32
PABPC1-215ENST00000520804 DHRS4L2Q6PKH6 230 aa17.06■□□□□ 0.32
PABPC1-215ENST00000520804 VHLLQ6RSH7 139 aa17.06■□□□□ 0.32
PABPC1-215ENST00000520804 H1FNTQ75WM6 255 aaPredicted RBP17.06■□□□□ 0.32
PABPC1-215ENST00000520804 NET1Q7Z628 596 aaPredicted RBP17.06■□□□□ 0.32
PABPC1-215ENST00000520804 GPR137CQ8N3F9 429 aa17.06■□□□□ 0.32
PABPC1-215ENST00000520804 OR4F15Q8NGB8 312 aa17.06■□□□□ 0.32
PABPC1-215ENST00000520804 DNAJA4Q8WW22 397 aaPredicted RBP17.06■□□□□ 0.32
PABPC1-215ENST00000520804 SPDL1Q96EA4 605 aa17.06■□□□□ 0.32
PABPC1-215ENST00000520804 VRK1Q99986 396 aaPredicted RBP17.06■□□□□ 0.32
PABPC1-215ENST00000520804 PIMREGQ9BSJ6 248 aa17.06■□□□□ 0.32
PABPC1-215ENST00000520804 SPATA5L1Q9BVQ7 753 aa17.06■□□□□ 0.32
PABPC1-215ENST00000520804 BEX2Q9BXY8 128 aa17.06■□□□□ 0.32
PABPC1-215ENST00000520804 PLK3Q9H4B4 646 aa17.06■□□□□ 0.32
PABPC1-215ENST00000520804 GPR35Q9HC97 309 aa17.06■□□□□ 0.32
PABPC1-215ENST00000520804 MYOZ1Q9NP98 299 aaPredicted RBP17.06■□□□□ 0.32
PABPC1-215ENST00000520804 LPAR3Q9UBY5 353 aa17.06■□□□□ 0.32
PABPC1-215ENST00000520804 GMEB1Q9Y692 573 aa17.06■□□□□ 0.32
PABPC1-215ENST00000520804 TRAV36DV7A0A075B6V5 113 aa17.05■□□□□ 0.32
PABPC1-215ENST00000520804 TPST1O60507 370 aa17.05■□□□□ 0.32
PABPC1-215ENST00000520804 ERLIN1O75477 346 aa17.05■□□□□ 0.32
PABPC1-215ENST00000520804 PPIBP23284 216 aaKnown RBP17.05■□□□□ 0.32
PABPC1-215ENST00000520804 IDH3AP50213 366 aa17.05■□□□□ 0.32
PABPC1-215ENST00000520804 HGFACQ04756 655 aa17.05■□□□□ 0.32
PABPC1-215ENST00000520804 GGTLC2Q14390 218 aa17.05■□□□□ 0.32
PABPC1-215ENST00000520804 GLIPR1L2Q4G1C9 344 aa17.05■□□□□ 0.32
PABPC1-215ENST00000520804 PAGE3Q5JUK9 113 aa17.05■□□□□ 0.32
PABPC1-215ENST00000520804 FAM91A1Q658Y4 838 aa17.05■□□□□ 0.32
PABPC1-215ENST00000520804 ULK3Q6PHR2 472 aa17.05■□□□□ 0.32
PABPC1-215ENST00000520804 KRT73Q86Y46 540 aa17.05■□□□□ 0.32
PABPC1-215ENST00000520804 PHC2Q8IXK0 858 aa17.05■□□□□ 0.32
PABPC1-215ENST00000520804 ANKS4BQ8N8V4 417 aa17.05■□□□□ 0.32
PABPC1-215ENST00000520804 ADPRHL1Q8NDY3 354 aa17.05■□□□□ 0.32
PABPC1-215ENST00000520804 PIK3C3Q8NEB9 887 aa17.05■□□□□ 0.32
PABPC1-215ENST00000520804 NUP37Q8NFH4 326 aa17.05■□□□□ 0.32
PABPC1-215ENST00000520804 TMEM158Q8WZ71 300 aa17.05■□□□□ 0.32
PABPC1-215ENST00000520804 ZNF837Q96EG3 531 aaPredicted RBP17.05■□□□□ 0.32
PABPC1-215ENST00000520804 OR2M2Q96R28 347 aa17.05■□□□□ 0.32
PABPC1-215ENST00000520804 EBF4Q9BQW3 602 aa17.05■□□□□ 0.32
PABPC1-215ENST00000520804 PRR14Q9BWN1 585 aa17.05■□□□□ 0.32
PABPC1-215ENST00000520804 CRLF2Q9HC73 371 aa17.05■□□□□ 0.32
PABPC1-215ENST00000520804 SLC52A3Q9NQ40 469 aa17.05■□□□□ 0.32
PABPC1-215ENST00000520804 CCDC167Q9P0B6 97 aa17.05■□□□□ 0.32
PABPC1-215ENST00000520804 VAPAQ9P0L0 249 aa17.05■□□□□ 0.32
PABPC1-215ENST00000520804 KLHL14Q9P2G3 628 aa17.05■□□□□ 0.32
PABPC1-215ENST00000520804 TRBV5-3A0A0A0MS03 114 aa17.04■□□□□ 0.32
PABPC1-215ENST00000520804 LOC390937A0A1W2PQ73 354 aa17.04■□□□□ 0.32
PABPC1-215ENST00000520804 TRAF3IP2O43734 574 aaPredicted RBP17.04■□□□□ 0.32
PABPC1-215ENST00000520804 AKAP8O43823 692 aaKnown RBP17.04■□□□□ 0.32
PABPC1-215ENST00000520804 LMX1BO60663 402 aa17.04■□□□□ 0.32
PABPC1-215ENST00000520804 CELA3BP08861 270 aa17.04■□□□□ 0.32
PABPC1-215ENST00000520804 CBLP22681 906 aa17.04■□□□□ 0.32
PABPC1-215ENST00000520804 PPOXP50336 477 aa17.04■□□□□ 0.32
PABPC1-215ENST00000520804 CEACAM16Q2WEN9 425 aa17.04■□□□□ 0.32
PABPC1-215ENST00000520804 MYPOPQ86VE0 399 aaPredicted RBP17.04■□□□□ 0.32
PABPC1-215ENST00000520804 TMEM123Q8N131 208 aa17.04■□□□□ 0.32
PABPC1-215ENST00000520804 SLC47A1Q96FL8 570 aa17.04■□□□□ 0.32
PABPC1-215ENST00000520804 FOXN4Q96NZ1 517 aa17.04■□□□□ 0.32
PABPC1-215ENST00000520804 CCDC28BQ9BUN5 200 aa17.04■□□□□ 0.32
PABPC1-215ENST00000520804 TMEM38AQ9H6F2 299 aa17.04■□□□□ 0.32
PABPC1-215ENST00000520804 ZNF442Q9H7R0 627 aa17.04■□□□□ 0.32
PABPC1-215ENST00000520804 SLCO1B3Q9NPD5 702 aa17.04■□□□□ 0.32
PABPC1-215ENST00000520804 TESQ9UGI8 421 aaKnown RBP17.04■□□□□ 0.32
PABPC1-215ENST00000520804 A0A087WUJ7 227 aa17.03■□□□□ 0.32
PABPC1-215ENST00000520804 ZNF503-AS2A6NEH8 195 aa17.03■□□□□ 0.32
PABPC1-215ENST00000520804 MS4A18H0YCH9 400 aa17.03■□□□□ 0.32
PABPC1-215ENST00000520804 PHF1O43189 567 aaPredicted RBP17.03■□□□□ 0.32
PABPC1-215ENST00000520804 ARR3P36575 388 aa17.03■□□□□ 0.32
PABPC1-215ENST00000520804 IDH3GP51553 393 aaPredicted RBP17.03■□□□□ 0.32
PABPC1-215ENST00000520804 IL1RL1Q01638 556 aa17.03■□□□□ 0.32
PABPC1-215ENST00000520804 MFSD13AQ14CX5 517 aa17.03■□□□□ 0.32
PABPC1-215ENST00000520804 CARTPTQ16568 116 aa17.03■□□□□ 0.32
PABPC1-215ENST00000520804 MS4A18Q3C1V0 323 aa17.03■□□□□ 0.32
PABPC1-215ENST00000520804 OR6S1Q8NH40 331 aa17.03■□□□□ 0.32
PABPC1-215ENST00000520804 SLC41A3Q96GZ6 507 aa17.03■□□□□ 0.32
PABPC1-215ENST00000520804 SHARPINQ9H0F6 387 aa17.03■□□□□ 0.32
PABPC1-215ENST00000520804 IKZF5Q9H5V7 419 aa17.03■□□□□ 0.32
PABPC1-215ENST00000520804 FBXO9Q9UK97 447 aaPredicted RBP17.03■□□□□ 0.32
PABPC1-215ENST00000520804 CORINQ9Y5Q5 1042 aa17.03■□□□□ 0.32
PABPC1-215ENST00000520804 IGHV4-61A0A0C4DH41 118 aa17.02■□□□□ 0.32
PABPC1-215ENST00000520804 PRORSD1PA6NEY8 169 aa17.02■□□□□ 0.32
PABPC1-215ENST00000520804 VSTM5A8MXK1 200 aa17.02■□□□□ 0.32
PABPC1-215ENST00000520804 ZNF99A8MXY4 864 aaPredicted RBP17.02■□□□□ 0.32
PABPC1-215ENST00000520804 NQO1P15559 274 aaKnown RBP17.02■□□□□ 0.32
PABPC1-215ENST00000520804 GPX2P18283 190 aa17.02■□□□□ 0.32
PABPC1-215ENST00000520804 SLC6A2P23975 617 aa17.02■□□□□ 0.32
PABPC1-215ENST00000520804 THBS4P35443 961 aa17.02■□□□□ 0.32
PABPC1-215ENST00000520804 RGS8P57771 180 aaPredicted RBP17.02■□□□□ 0.32
PABPC1-215ENST00000520804 NCALDP61601 193 aa17.02■□□□□ 0.32
PABPC1-215ENST00000520804 SCARB2Q14108 478 aa17.02■□□□□ 0.32
PABPC1-215ENST00000520804 OR1Q1Q15612 314 aa17.02■□□□□ 0.32
PABPC1-215ENST00000520804 PHYHD1Q5SRE7 291 aa17.02■□□□□ 0.32
PABPC1-215ENST00000520804 AGBL2Q5U5Z8 902 aa17.02■□□□□ 0.32
PABPC1-215ENST00000520804 MDP1Q86V88 176 aa17.02■□□□□ 0.32
PABPC1-215ENST00000520804 UEVLDQ8IX04 471 aa17.02■□□□□ 0.32
PABPC1-215ENST00000520804 CCDC36Q8IYA8 594 aa17.02■□□□□ 0.32
PABPC1-215ENST00000520804 ARIH2OSQ8N7S6 290 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms