RNA–Protein interactions for RNA: ENST00000518689.5

VEGFA-218, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-218ENST00000518689 ROR2Q01974 943 aaKnown RBP10.79□□□□□ -0.68
VEGFA-218ENST00000518689 NFYCQ13952 458 aa10.79□□□□□ -0.68
VEGFA-218ENST00000518689 CYP51A1Q16850 503 aa10.79□□□□□ -0.68
VEGFA-218ENST00000518689 SWT1Q5T5J6 900 aaKnown RBP10.79□□□□□ -0.68
VEGFA-218ENST00000518689 NANOGP8Q6NSW7 305 aa10.79□□□□□ -0.68
VEGFA-218ENST00000518689 CGB2Q6NT52 195 aa10.79□□□□□ -0.68
VEGFA-218ENST00000518689 ZNF544Q6NX49 715 aa10.79□□□□□ -0.68
VEGFA-218ENST00000518689 ANKRD16Q6P6B7 361 aa10.79□□□□□ -0.68
VEGFA-218ENST00000518689 KLHL24Q6TFL4 600 aa10.79□□□□□ -0.68
VEGFA-218ENST00000518689 TSPYL5Q86VY4 417 aaPredicted RBP10.79□□□□□ -0.68
VEGFA-218ENST00000518689 RBM45Q8IUH3 476 aaKnown RBP10.79□□□□□ -0.68
VEGFA-218ENST00000518689 FBXL14Q8N1E6 418 aa10.79□□□□□ -0.68
VEGFA-218ENST00000518689 DEPDC4Q8N2C3 294 aa10.79□□□□□ -0.68
VEGFA-218ENST00000518689 ADPRHL1Q8NDY3 354 aa10.79□□□□□ -0.68
VEGFA-218ENST00000518689 ANKK1Q8NFD2 765 aa10.79□□□□□ -0.68
VEGFA-218ENST00000518689 OR6T1Q8NGN1 323 aa10.79□□□□□ -0.68
VEGFA-218ENST00000518689 MAGEE2Q8TD90 523 aaPredicted RBP10.79□□□□□ -0.68
VEGFA-218ENST00000518689 OR2M2Q96R28 347 aa10.79□□□□□ -0.68
VEGFA-218ENST00000518689 TMEM43Q9BTV4 400 aa10.79□□□□□ -0.68
VEGFA-218ENST00000518689 TMEM120AQ9BXJ8 343 aa10.79□□□□□ -0.68
VEGFA-218ENST00000518689 EVA1AQ9H8M9 152 aa10.79□□□□□ -0.68
VEGFA-218ENST00000518689 NANOGQ9H9S0 305 aa10.79□□□□□ -0.68
VEGFA-218ENST00000518689 FKRPQ9H9S5 495 aa10.79□□□□□ -0.68
VEGFA-218ENST00000518689 TMEM27Q9HBJ8 222 aa10.79□□□□□ -0.68
VEGFA-218ENST00000518689 GPR35Q9HC97 309 aa10.79□□□□□ -0.68
VEGFA-218ENST00000518689 OBP2BQ9NPH6 170 aa10.79□□□□□ -0.68
VEGFA-218ENST00000518689 ZNF446Q9NWS9 450 aa10.79□□□□□ -0.68
VEGFA-218ENST00000518689 CRNNQ9UBG3 495 aaPredicted RBP10.79□□□□□ -0.68
VEGFA-218ENST00000518689 MOKQ9UQ07 419 aa10.79□□□□□ -0.68
VEGFA-218ENST00000518689 ATP23Q9Y6H3 246 aa10.79□□□□□ -0.68
VEGFA-218ENST00000518689 A0A096LPE4 126 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 A0A1W2PPZ6 126 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 INAFM1C9JVW0 142 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 LRRN3E7EW58 273 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 FXYD1O00168 92 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 SSX4O60224 188 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 FMO6PO60774 539 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 IGLV1-44P01699 117 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 THY1P04216 161 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 PCSK6P29122 969 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 APOBEC3AP31941 199 aaPredicted RBP10.78□□□□□ -0.68
VEGFA-218ENST00000518689 PCGF2P35227 344 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 SH3BGRP55822 239 aaPredicted RBP10.78□□□□□ -0.68
VEGFA-218ENST00000518689 TUBA1BP68363 451 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 TUBA4AP68366 448 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 ARF1P84077 181 aaKnown RBP10.78□□□□□ -0.68
VEGFA-218ENST00000518689 C1DQ13901 141 aaKnown RBP10.78□□□□□ -0.68
VEGFA-218ENST00000518689 MFSD13AQ14CX5 517 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 MST1LQ2TV78 715 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 PHYHD1Q5SRE7 291 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 ZNF613Q6PF04 617 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 WDR88Q6ZMY6 472 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 TUBA1AQ71U36 451 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 RANBP3LQ86VV4 465 aaPredicted RBP10.78□□□□□ -0.68
VEGFA-218ENST00000518689 SCAIQ8N9R8 606 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 OR10A6Q8NH74 314 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 RNF217Q8TC41 542 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 HTRA1Q92743 480 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 TAMM41Q96BW9 452 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 HS6ST2Q96MM7 605 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 ZNF317Q96PQ6 595 aaPredicted RBP10.78□□□□□ -0.68
VEGFA-218ENST00000518689 SLC38A2Q96QD8 506 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 MCHR1Q99705 422 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 BARX1Q9HBU1 254 aaPredicted RBP10.78□□□□□ -0.68
VEGFA-218ENST00000518689 MRPL39Q9NYK5 338 aaKnown RBP10.78□□□□□ -0.68
VEGFA-218ENST00000518689 SLC13A4Q9UKG4 626 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 ANK3Q12955 4377 aaKnown RBP10.78□□□□□ -0.68
VEGFA-218ENST00000518689 SONP18583 2426 aaKnown RBP10.78□□□□□ -0.68
VEGFA-218ENST00000518689 JMJD1CQ15652 2540 aa10.78□□□□□ -0.68
VEGFA-218ENST00000518689 A0A096LNT2 108 aa10.77□□□□□ -0.69
VEGFA-218ENST00000518689 ZNF503-AS2A6NEH8 195 aa10.77□□□□□ -0.69
VEGFA-218ENST00000518689 H7C417 338 aa10.77□□□□□ -0.69
VEGFA-218ENST00000518689 PLPP3O14495 311 aa10.77□□□□□ -0.69
VEGFA-218ENST00000518689 CHP2O43745 196 aa10.77□□□□□ -0.69
VEGFA-218ENST00000518689 SLC43A1O75387 559 aa10.77□□□□□ -0.69
VEGFA-218ENST00000518689 HOXB1P14653 301 aaPredicted RBP10.77□□□□□ -0.69
VEGFA-218ENST00000518689 SWI5Q1ZZU3 235 aa10.77□□□□□ -0.69
VEGFA-218ENST00000518689 TRMT5Q32P41 509 aaKnown RBP10.77□□□□□ -0.69
VEGFA-218ENST00000518689 C3orf36Q3SXR2 165 aa10.77□□□□□ -0.69
VEGFA-218ENST00000518689 RABL3Q5HYI8 236 aa10.77□□□□□ -0.69
VEGFA-218ENST00000518689 ENTPD8Q5MY95 495 aa10.77□□□□□ -0.69
VEGFA-218ENST00000518689 HMBOX1Q6NT76 420 aa10.77□□□□□ -0.69
VEGFA-218ENST00000518689 CCDC80Q76M96 950 aa10.77□□□□□ -0.69
VEGFA-218ENST00000518689 PATL1Q86TB9 770 aaKnown RBP10.77□□□□□ -0.69
VEGFA-218ENST00000518689 MYPOPQ86VE0 399 aaPredicted RBP10.77□□□□□ -0.69
VEGFA-218ENST00000518689 CALHM3Q86XJ0 350 aa10.77□□□□□ -0.69
VEGFA-218ENST00000518689 PRIMA1Q86XR5 153 aa10.77□□□□□ -0.69
VEGFA-218ENST00000518689 SLC30A8Q8IWU4 369 aa10.77□□□□□ -0.69
VEGFA-218ENST00000518689 FAM169BQ8N8A8 192 aa10.77□□□□□ -0.69
VEGFA-218ENST00000518689 OR10H5Q8NGA6 315 aa10.77□□□□□ -0.69
VEGFA-218ENST00000518689 TXNDC15Q96J42 360 aa10.77□□□□□ -0.69
VEGFA-218ENST00000518689 ADAD1Q96M93 576 aaKnown RBP10.77□□□□□ -0.69
VEGFA-218ENST00000518689 EPYCQ99645 322 aa10.77□□□□□ -0.69
VEGFA-218ENST00000518689 EMC6Q9BV81 110 aa10.77□□□□□ -0.69
VEGFA-218ENST00000518689 PCDHAC1Q9H158 963 aa10.77□□□□□ -0.69
VEGFA-218ENST00000518689 SEC61A2Q9H9S3 476 aa10.77□□□□□ -0.69
VEGFA-218ENST00000518689 CRLF2Q9HC73 371 aa10.77□□□□□ -0.69
VEGFA-218ENST00000518689 FGFR1OP2Q9NVK5 253 aa10.77□□□□□ -0.69
VEGFA-218ENST00000518689 SELENONQ9NZV5 590 aa10.77□□□□□ -0.69
VEGFA-218ENST00000518689 CORINQ9Y5Q5 1042 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms