RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 TRIM64BA6NI03 449 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 E7EQL1 145 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 ZNF587BE7ETH6 402 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 M0R3G1 203 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 PLPP3O14495 311 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 SMAD7O15105 426 aaKnown RBP10.06□□□□□ -0.8
VCAN-212ENST00000515397 TRAF3IP2O43734 574 aaPredicted RBP10.06□□□□□ -0.8
VCAN-212ENST00000515397 CHP2O43745 196 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 FMO6PO60774 539 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 CCDC22O60826 627 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 NDUFS7O75251 213 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 ZNF432O94892 652 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 NPPAP01160 153 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 NCK1P16333 377 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 CD40P25942 277 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 LSP1P33241 339 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 CDKN1AP38936 164 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 PTH2RP49190 550 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 SLC7A2P52569 658 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 RIPPLY3P57055 190 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 GNGT1P63211 74 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 LSM11P83369 360 aaKnown RBP eCLIP10.06□□□□□ -0.8
VCAN-212ENST00000515397 ARF1P84077 181 aaKnown RBP10.06□□□□□ -0.8
VCAN-212ENST00000515397 POU3F1Q03052 451 aaPredicted RBP10.06□□□□□ -0.8
VCAN-212ENST00000515397 CAMK2DQ13557 499 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 PGGHGQ32M88 737 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 OR7E24Q6IFN5 339 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 HMBOX1Q6NT76 420 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 ZNF613Q6PF04 617 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 TTC33Q6PID6 262 aaPredicted RBP10.06□□□□□ -0.8
VCAN-212ENST00000515397 B3GLCTQ6Y288 498 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 YTHDF3Q7Z739 585 aaKnown RBP10.06□□□□□ -0.8
VCAN-212ENST00000515397 VTCN1Q7Z7D3 282 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 CPLX4Q7Z7G2 160 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 MEX3DQ86XN8 651 aaKnown RBP10.06□□□□□ -0.8
VCAN-212ENST00000515397 UEVLDQ8IX04 471 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 MICU2Q8IYU8 434 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 OR1K1Q8NGR3 316 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 PFN4Q8NHR9 129 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 TMEM171Q8WVE6 324 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 IGFBPL1Q8WX77 278 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 HTRA1Q92743 480 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 BCL2L2Q92843 193 aaPredicted RBP10.06□□□□□ -0.8
VCAN-212ENST00000515397 FBXW5Q969U6 566 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 GTPBP3Q969Y2 492 aaKnown RBP10.06□□□□□ -0.8
VCAN-212ENST00000515397 RADILQ96JH8 1075 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 Q96MF0 132 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 OR2M2Q96R28 347 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 EPYCQ99645 322 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 USB1Q9BQ65 265 aaKnown RBP10.06□□□□□ -0.8
VCAN-212ENST00000515397 PRSS27Q9BQR3 290 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 ASPNQ9BXN1 380 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 RHCGQ9UBD6 479 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 B3GALT5Q9Y2C3 310 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 MAGED1Q9Y5V3 778 aaPredicted RBP10.06□□□□□ -0.8
VCAN-212ENST00000515397 SNX13Q9Y5W8 968 aa10.06□□□□□ -0.8
VCAN-212ENST00000515397 HEATR1Q9H583 2144 aaKnown RBP10.06□□□□□ -0.8
VCAN-212ENST00000515397 TLN2Q9Y4G6 2542 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 FAM220BPB1ANY3 271 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 NME4O00746 187 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 SLC43A1O75387 559 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 CD8AP01732 235 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 DANCRP0C864 163 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 ADORA3P0DMS8 318 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 NUDT2P50583 147 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 CDH11P55287 796 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 ATP5J2P56134 94 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 TAS2R41P59536 307 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 PRPS1P60891 318 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 TGFBR3Q03167 851 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 PUDPQ08623 228 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 VEZF1Q14119 521 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 CEACAM16Q2WEN9 425 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 TBRG1Q3YBR2 411 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 ERICH5Q6P6B1 374 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 TMEM108Q6UXF1 575 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 NHLRC1Q6VVB1 395 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 TMEM255BQ8WV15 326 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 PIP5K1AQ99755 562 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 TMEM43Q9BTV4 400 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 AMBRA1Q9C0C7 1298 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 MYLK2Q9H1R3 596 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 NELFAQ9H3P2 528 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 SEC61A2Q9H9S3 476 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 CRLF2Q9HC73 371 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 GPR35Q9HC97 309 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 MEPEQ9NQ76 525 aaPredicted RBP10.05□□□□□ -0.8
VCAN-212ENST00000515397 DLL4Q9NR61 685 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 MRPL39Q9NYK5 338 aaKnown RBP10.05□□□□□ -0.8
VCAN-212ENST00000515397 TAS2R5Q9NYW4 299 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 RIMS3Q9UJD0 308 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 POU2F3Q9UKI9 436 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 MOKQ9UQ07 419 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 ATP23Q9Y6H3 246 aa10.05□□□□□ -0.8
VCAN-212ENST00000515397 RAI1Q7Z5J4 1906 aaPredicted RBP10.04□□□□□ -0.8
VCAN-212ENST00000515397 GMNCA6NCL1 334 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 ZNF503-AS2A6NEH8 195 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 BLOC1S5-TXNDC5H3BN57 136 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 J3KTA2 159 aa10.04□□□□□ -0.8
VCAN-212ENST00000515397 CXCR6O00574 342 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms