RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 TOP1P11387 765 aaKnown RBP3.27□□□□□ -1.89
HMGCS1-207ENST00000514610 TDGF1P13385 188 aa3.27□□□□□ -1.89
HMGCS1-207ENST00000514610 ABOP16442 354 aa3.27□□□□□ -1.89
HMGCS1-207ENST00000514610 TBPP20226 339 aa3.27□□□□□ -1.89
HMGCS1-207ENST00000514610 TDGF1P3P51864 188 aa3.27□□□□□ -1.89
HMGCS1-207ENST00000514610 CRISP3P54108 245 aa3.27□□□□□ -1.89
HMGCS1-207ENST00000514610 OGDHQ02218 1023 aa3.27□□□□□ -1.89
HMGCS1-207ENST00000514610 SCRN3Q0VDG4 424 aa3.27□□□□□ -1.89
HMGCS1-207ENST00000514610 DGUOKQ16854 277 aa3.27□□□□□ -1.89
HMGCS1-207ENST00000514610 Q6P435 159 aa3.27□□□□□ -1.89
HMGCS1-207ENST00000514610 ZNF429Q86V71 674 aa3.27□□□□□ -1.89
HMGCS1-207ENST00000514610 TMEM158Q8WZ71 300 aa3.27□□□□□ -1.89
HMGCS1-207ENST00000514610 PANX2Q96RD6 677 aa3.27□□□□□ -1.89
HMGCS1-207ENST00000514610 ZBTB18Q99592 522 aa3.27□□□□□ -1.89
HMGCS1-207ENST00000514610 RIOK2Q9BVS4 552 aaKnown RBP3.27□□□□□ -1.89
HMGCS1-207ENST00000514610 ROPN1BQ9BZX4 212 aaPredicted RBP3.27□□□□□ -1.89
HMGCS1-207ENST00000514610 ANKRD19PQ9H560 264 aa3.27□□□□□ -1.89
HMGCS1-207ENST00000514610 SGK2Q9HBY8 427 aa3.27□□□□□ -1.89
HMGCS1-207ENST00000514610 IL26Q9NPH9 171 aa3.27□□□□□ -1.89
HMGCS1-207ENST00000514610 SLC25A15Q9Y619 301 aa3.27□□□□□ -1.89
HMGCS1-207ENST00000514610 SCN2AQ99250 2005 aa3.27□□□□□ -1.89
HMGCS1-207ENST00000514610 ARHGAP21Q5T5U3 1957 aa3.27□□□□□ -1.89
HMGCS1-207ENST00000514610 TRBV6-6A0A0A6YYG2 114 aa3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 A0A1W2PPE3 182 aa3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 A0A1W2PPV9 198 aa3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 OR7A10O76100 309 aa3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 PCCAP05165 728 aaPredicted RBP3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 HOXC4P09017 264 aaPredicted RBP3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 ETS2P15036 469 aa3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 CMA1P23946 247 aa3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 CD1CP29017 333 aa3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 TAGLN2P37802 199 aaKnown RBP3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 UCNP55089 124 aa3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 LRRC10Q5BKY1 277 aa3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 KDELC1Q6UW63 502 aa3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 ZNF621Q6ZSS3 439 aa3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 TPRX1Q8N7U7 411 aa3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 FNDC5Q8NAU1 212 aa3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 SDR9C7Q8NEX9 313 aa3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 PYROXD1Q8WU10 500 aa3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 ZNF606Q8WXB4 792 aa3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 SMARCD2Q92925 531 aa3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 LRRC58Q96CX6 371 aa3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 TCEANC2Q96MN5 208 aa3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 MS4A4EQ96PG1 132 aa3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 PELOQ9BRX2 385 aaKnown RBP3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 SLC25A39Q9BZJ4 359 aaPredicted RBP3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 NIPAL2Q9H841 368 aa3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 CALYQ9NYX4 217 aa3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 ASB3Q9Y575 518 aa3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 WSB1Q9Y6I7 421 aa3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 NACAE9PAV3 2078 aa3.26□□□□□ -1.89
HMGCS1-207ENST00000514610 PCP4L1A6NKN8 68 aa3.25□□□□□ -1.89
HMGCS1-207ENST00000514610 OR52A4PA6NMU1 304 aa3.25□□□□□ -1.89
HMGCS1-207ENST00000514610 C12orf71A8MTZ7 269 aa3.25□□□□□ -1.89
HMGCS1-207ENST00000514610 HAS3O00219 553 aa3.25□□□□□ -1.89
HMGCS1-207ENST00000514610 C1orf105O95561 183 aa3.25□□□□□ -1.89
HMGCS1-207ENST00000514610 ATP1B2P14415 290 aaPredicted RBP3.25□□□□□ -1.89
HMGCS1-207ENST00000514610 CCR6P51684 374 aa3.25□□□□□ -1.89
HMGCS1-207ENST00000514610 IRX3P78415 501 aaPredicted RBP3.25□□□□□ -1.89
HMGCS1-207ENST00000514610 PPIL2Q13356 520 aa3.25□□□□□ -1.89
HMGCS1-207ENST00000514610 GK3PQ14409 553 aa3.25□□□□□ -1.89
HMGCS1-207ENST00000514610 ZNF77Q15935 545 aa3.25□□□□□ -1.89
HMGCS1-207ENST00000514610 PHYHD1Q5SRE7 291 aa3.25□□□□□ -1.89
HMGCS1-207ENST00000514610 THOC6Q86W42 341 aaKnown RBP3.25□□□□□ -1.89
HMGCS1-207ENST00000514610 ENTHD1Q8IYW4 607 aa3.25□□□□□ -1.89
HMGCS1-207ENST00000514610 Q8N9L7 120 aa3.25□□□□□ -1.89
HMGCS1-207ENST00000514610 MDS2Q8NDY4 140 aa3.25□□□□□ -1.89
HMGCS1-207ENST00000514610 NT5C3BQ969T7 300 aa3.25□□□□□ -1.89
HMGCS1-207ENST00000514610 CNN2Q99439 309 aaKnown RBP3.25□□□□□ -1.89
HMGCS1-207ENST00000514610 GBA3Q9H227 469 aa3.25□□□□□ -1.89
HMGCS1-207ENST00000514610 ZFP14Q9HCL3 533 aa3.25□□□□□ -1.89
HMGCS1-207ENST00000514610 HYPKQ9NX55 129 aa3.25□□□□□ -1.89
HMGCS1-207ENST00000514610 SLC25A37Q9NYZ2 338 aa3.25□□□□□ -1.89
HMGCS1-207ENST00000514610 MTCL1Q9Y4B5 1905 aaKnown RBP3.25□□□□□ -1.89
HMGCS1-207ENST00000514610 IGHV3-64DA0A0J9YX35 117 aa3.24□□□□□ -1.89
HMGCS1-207ENST00000514610 GNMTQ14749 295 aa3.24□□□□□ -1.89
HMGCS1-207ENST00000514610 CEP55Q53EZ4 464 aa3.24□□□□□ -1.89
HMGCS1-207ENST00000514610 FRMPD2BQ6IN97 320 aa3.24□□□□□ -1.89
HMGCS1-207ENST00000514610 H2BFWTQ7Z2G1 175 aa3.24□□□□□ -1.89
HMGCS1-207ENST00000514610 PLA2G4DQ86XP0 818 aa3.24□□□□□ -1.89
HMGCS1-207ENST00000514610 OR4F15Q8NGB8 312 aa3.24□□□□□ -1.89
HMGCS1-207ENST00000514610 OR51G1Q8NGK1 321 aa3.24□□□□□ -1.89
HMGCS1-207ENST00000514610 OR1L6Q8NGR2 347 aa3.24□□□□□ -1.89
HMGCS1-207ENST00000514610 RIOK1Q9BRS2 568 aaKnown RBP3.24□□□□□ -1.89
HMGCS1-207ENST00000514610 KRTAP4-3Q9BYR4 195 aa3.24□□□□□ -1.89
HMGCS1-207ENST00000514610 RANBP3Q9H6Z4 567 aaPredicted RBP3.24□□□□□ -1.89
HMGCS1-207ENST00000514610 ADAP2Q9NPF8 381 aa3.24□□□□□ -1.89
HMGCS1-207ENST00000514610 SPATA7Q9P0W8 599 aa3.24□□□□□ -1.89
HMGCS1-207ENST00000514610 XCL2Q9UBD3 114 aa3.24□□□□□ -1.89
HMGCS1-207ENST00000514610 ARHGEF35A5YM69 484 aa3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 NKX2-6A6NCS4 301 aa3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 GOLGA8SH3BPF8 625 aa3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 IGHDP01880 384 aa3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 ALDOBP05062 364 aa3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 UBTFL1P0CB47 393 aaPredicted RBP3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 FDFT1P37268 417 aa3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 NPBWR2P48146 333 aa3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 CSNK1DP48730 415 aa3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 FGF8P55075 233 aaPredicted RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms