RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 C14orf79Q96F83 325 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 NPAS1Q99742 590 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 ARHGAP9Q9BRR9 750 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 ZDHHC5Q9C0B5 715 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 ZNF700Q9H0M5 742 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 ADAM29Q9UKF5 820 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 PPT2Q9UMR5 302 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 ATG4BQ9Y4P1 393 aa12.15□□□□□ -0.46
TCOF1-213ENST00000514442 BORCS7-ASMTA0A0B4J1R7 106 aa12.15□□□□□ -0.47
TCOF1-213ENST00000514442 TRBV11-1A0A0K0K1C0 115 aa12.15□□□□□ -0.47
TCOF1-213ENST00000514442 IFNA10P01566 189 aa12.15□□□□□ -0.47
TCOF1-213ENST00000514442 OR1Q1Q15612 314 aa12.15□□□□□ -0.47
TCOF1-213ENST00000514442 ZNF79Q15937 498 aa12.15□□□□□ -0.47
TCOF1-213ENST00000514442 MRPL2Q5T653 305 aaKnown RBP12.15□□□□□ -0.47
TCOF1-213ENST00000514442 METRNLQ641Q3 311 aa12.15□□□□□ -0.47
TCOF1-213ENST00000514442 BHLHA9Q7RTU4 235 aa12.15□□□□□ -0.47
TCOF1-213ENST00000514442 MMP21Q8N119 569 aa12.15□□□□□ -0.47
TCOF1-213ENST00000514442 TCTN2Q96GX1 697 aa12.15□□□□□ -0.47
TCOF1-213ENST00000514442 ZNF649Q9BS31 505 aa12.15□□□□□ -0.47
TCOF1-213ENST00000514442 KLK8O60259 260 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 SCGB1D2O95969 90 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 PRSS3P35030 304 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 FXYD6P3P58550 94 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 CYCSP99999 105 aaKnown RBP12.14□□□□□ -0.47
TCOF1-213ENST00000514442 PLP2Q04941 152 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 ZNF616Q08AN1 781 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 HMGN3Q15651 99 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 PLEKHN1Q494U1 663 aaPredicted RBP12.14□□□□□ -0.47
TCOF1-213ENST00000514442 FAM83HQ6ZRV2 1179 aaPredicted RBP12.14□□□□□ -0.47
TCOF1-213ENST00000514442 TRILQ7L0X0 811 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 HSD17B13Q7Z5P4 300 aaPredicted RBP12.14□□□□□ -0.47
TCOF1-213ENST00000514442 PLPP6Q8IY26 295 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 OR52N1Q8NH53 320 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 MICU1Q9BPX6 476 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 DUSP23Q9BVJ7 150 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 TGIF2Q9GZN2 237 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 GLIPR2Q9H4G4 154 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 EGLN3Q9H6Z9 239 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 LY75O60449 1722 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 ATAD5Q96QE3 1844 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 ATG12O94817 140 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 EIF4EP06730 217 aaKnown RBP12.14□□□□□ -0.47
TCOF1-213ENST00000514442 METAP1P53582 386 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 SPIN3Q5JUX0 258 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 UEVLDQ8IX04 471 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 RELL2Q8NC24 303 aaPredicted RBP12.14□□□□□ -0.47
TCOF1-213ENST00000514442 DUSP19Q8WTR2 217 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 RNF141Q8WVD5 230 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 C4orf36Q96KX1 117 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 LYSMD1Q96S90 227 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 NAA11Q9BSU3 229 aaPredicted RBP12.14□□□□□ -0.47
TCOF1-213ENST00000514442 OR52D1Q9H346 318 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 WBP1LQ9NX94 342 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 EXO1Q9UQ84 846 aaKnown RBP12.14□□□□□ -0.47
TCOF1-213ENST00000514442 CBY1Q9Y3M2 126 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 ANKRD31Q8N7Z5 1873 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 HTR3BO95264 441 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 DCNP07585 359 aaKnown RBP12.14□□□□□ -0.47
TCOF1-213ENST00000514442 RAB38P57729 211 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 PPP2CBP62714 309 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 PPP2CAP67775 309 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 DGCR2P98153 550 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 RIN1Q13671 783 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 ZNF273Q14593 569 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 OR7A5Q15622 319 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 CDNFQ49AH0 187 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 C14orf28Q4W4Y0 310 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 SYT14P1Q58G82 188 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 TMEM64Q6YI46 380 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 PPP1R3BQ86XI6 285 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 GLB1L2Q8IW92 636 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 ZNF100Q8IYN0 542 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 SULT4A1Q9BR01 284 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 TRAV18A0A075B6X5 111 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 PLPP1O14494 284 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 PLA2G10O15496 165 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 RAB40ALP0C0E4 278 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 IFNGR1P15260 489 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 ZNF43P17038 809 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 UBE2IP63279 158 aaKnown RBP12.14□□□□□ -0.47
TCOF1-213ENST00000514442 CD300LGQ6UXG3 332 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 LRRC69Q6ZNQ3 347 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 SLC35F2Q8IXU6 374 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 CMIPQ8IY22 773 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 OR6S1Q8NH40 331 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 SLC37A2Q8TED4 501 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 RAB40AQ8WXH6 277 aa12.14□□□□□ -0.47
TCOF1-213ENST00000514442 A0A1B0GUH1 482 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 NUDT19A8MXV4 375 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 RGS11O94810 467 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 ANXA7P20073 488 aaKnown RBP12.13□□□□□ -0.47
TCOF1-213ENST00000514442 FRKP42685 505 aaPredicted RBP12.13□□□□□ -0.47
TCOF1-213ENST00000514442 HEPHL1Q6MZM0 1159 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 LGALS14Q8TCE9 139 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 UNKLQ9H9P5 680 aaKnown RBP12.13□□□□□ -0.47
TCOF1-213ENST00000514442 C1GALT1Q9NS00 363 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 TVP23AA6NH52 213 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 RAB3DO95716 219 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 ZNF628Q5EBL2 1059 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 FAM26EQ8N5C1 309 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms