RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	PSMB10	P40306	273 aa		10.24	□□□□□ -0.77
PDCD6-210	ENST00000513582	OMP	P47874	163 aa		10.24	□□□□□ -0.77
PDCD6-210	ENST00000513582	NRG3	P56975	720 aa		10.24	□□□□□ -0.77
PDCD6-210	ENST00000513582	TMEM44	Q2T9K0	475 aa		10.24	□□□□□ -0.77
PDCD6-210	ENST00000513582	LYPLAL1	Q5VWZ2	237 aa		10.24	□□□□□ -0.77
PDCD6-210	ENST00000513582	C17orf64	Q86WR6	236 aa		10.24	□□□□□ -0.77
PDCD6-210	ENST00000513582	ARL14	Q8N4G2	192 aa		10.24	□□□□□ -0.77
PDCD6-210	ENST00000513582	TMEM255B	Q8WV15	326 aa		10.24	□□□□□ -0.77
PDCD6-210	ENST00000513582	LURAP1	Q96LR2	239 aa		10.24	□□□□□ -0.77
PDCD6-210	ENST00000513582	C20orf24	Q9BUV8	137 aa		10.24	□□□□□ -0.77
PDCD6-210	ENST00000513582	TOLLIP	Q9H0E2	274 aa		10.24	□□□□□ -0.77
PDCD6-210	ENST00000513582	FOXJ3	Q9UPW0	622 aa		10.24	□□□□□ -0.77
PDCD6-210	ENST00000513582	MYO16	Q9Y6X6	1858 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	CPED1	A4D0V7	1026 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	ZNF860	A6NHJ4	632 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	ACOT7	O00154	380 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	PSMD9	O00233	223 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	HEXA	P06865	529 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	GTF2F2	P13984	249 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	LAG3	P18627	525 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	AQP2	P41181	271 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	GUCA2A	Q02747	115 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	LY6G6F	Q5SQ64	297 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	PRPF38B	Q5VTL8	546 aa	Known RBP	10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	UNQ6494/PRO21346	Q6UXR6	183 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	KRT77	Q7Z794	578 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	OR51L1	Q8NGJ5	315 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	ZG16B	Q96DA0	208 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	UBQLN3	Q9H347	655 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	TMPRSS5	Q9H3S3	457 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	TCF7L1	Q9HCS4	588 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582		K7ESM1	405 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	PHYH	O14832	338 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	PPM1D	O15297	605 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	TGM5	O43548	720 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	RBBP9	O75884	186 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	SFTA3	P0C7M3	94 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	TYRP1	P17643	537 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	NDUFV2	P19404	249 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	TRHR	P34981	398 aa	Predicted RBP	10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	ACTR1B	P42025	376 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	ATP1B3	P54709	279 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	TAS2R20	P59543	309 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	MRPL58	Q14197	206 aa	Known RBP	10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	TRAM1	Q15629	374 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	TCTN1	Q2MV58	587 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	OR4N5	Q8IXE1	308 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	CCDC116	Q8IYX3	515 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	ZNF296	Q8WUU4	475 aa	Predicted RBP	10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	SMPDL3A	Q92484	453 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	MARS2	Q96GW9	593 aa	Known RBP	10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	HSPA12B	Q96MM6	686 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	KLF16	Q9BXK1	252 aa	Predicted RBP	10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	SLC46A2	Q9BY10	475 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	PRO1933	Q9H354	126 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	MYNN	Q9NPC7	610 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	GTF2A1L	Q9UNN4	478 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	HCFC2	Q9Y5Z7	792 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	LOC100509620	A0A075B734	347 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	TRAPPC13	A5PLN9	417 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	RNF222	A6NCQ9	220 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	SLC31A2	O15432	143 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	RHO	P08100	348 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	SNRNP70	P08621	437 aa	Known RBP	10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	ST6GAL1	P15907	406 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	NT5E	P21589	574 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	ITPKB	P27987	946 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	FAU	P35544	74 aa	Known RBP	10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	MAPK8	P45983	427 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	PYY3	Q5JQD4	70 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	ARRDC1	Q8N5I2	433 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	OR5AR1	Q8NGP9	310 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	PPP1R1C	Q8WVI7	109 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	DMRT3	Q9NQL9	472 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582	TNFSF18	Q9UNG2	199 aa		10.23	□□□□□ -0.77
PDCD6-210	ENST00000513582		A0A0B4J2A0	478 aa		10.22	□□□□□ -0.77
PDCD6-210	ENST00000513582	TRBV2	A0A0J9YWF9	115 aa		10.22	□□□□□ -0.77
PDCD6-210	ENST00000513582		A0A1W2PPH5	198 aa		10.22	□□□□□ -0.77
PDCD6-210	ENST00000513582	IMPA2	O14732	288 aa		10.22	□□□□□ -0.77
PDCD6-210	ENST00000513582	VNN2	O95498	520 aa		10.22	□□□□□ -0.77
PDCD6-210	ENST00000513582	PNLIPRP1	P54315	467 aa		10.22	□□□□□ -0.77
PDCD6-210	ENST00000513582	PLA2G7	Q13093	441 aa		10.22	□□□□□ -0.77
PDCD6-210	ENST00000513582	HENMT1	Q5T8I9	393 aa	Known RBP	10.22	□□□□□ -0.77
PDCD6-210	ENST00000513582	C11orf87	Q6NUJ2	197 aa		10.22	□□□□□ -0.77
PDCD6-210	ENST00000513582	ZNF620	Q6ZNG0	422 aa		10.22	□□□□□ -0.77
PDCD6-210	ENST00000513582	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	10.22	□□□□□ -0.77
PDCD6-210	ENST00000513582	VRK2	Q86Y07	508 aa		10.22	□□□□□ -0.77
PDCD6-210	ENST00000513582	GID4	Q8IVV7	300 aa		10.22	□□□□□ -0.77
PDCD6-210	ENST00000513582	ETFBKMT	Q8IXQ9	262 aa		10.22	□□□□□ -0.77
PDCD6-210	ENST00000513582	RGP1	Q92546	391 aa	Predicted RBP	10.22	□□□□□ -0.77
PDCD6-210	ENST00000513582	NRIP2	Q9BQI9	281 aa		10.22	□□□□□ -0.77
PDCD6-210	ENST00000513582	DPH1	Q9BZG8	443 aa		10.22	□□□□□ -0.77
PDCD6-210	ENST00000513582	SHPK	Q9UHJ6	478 aa		10.22	□□□□□ -0.77
PDCD6-210	ENST00000513582	TRAV1-2	A0A0B4J238	106 aa		10.22	□□□□□ -0.77
PDCD6-210	ENST00000513582	GGT3P	A6NGU5	568 aa		10.22	□□□□□ -0.77
PDCD6-210	ENST00000513582	IFITM5	A6NNB3	132 aa		10.22	□□□□□ -0.77
PDCD6-210	ENST00000513582	OR2F2	O95006	317 aa		10.22	□□□□□ -0.77
PDCD6-210	ENST00000513582	CHRM4	P08173	479 aa		10.22	□□□□□ -0.77
PDCD6-210	ENST00000513582	SRM	P19623	302 aa		10.22	□□□□□ -0.77
PDCD6-210	ENST00000513582	IMPA1	P29218	277 aa		10.22	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms