RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 ADCK1Q86TW2 530 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 YRDCQ86U90 279 aaKnown RBP3.4□□□□□ -1.87
HTT-210ENST00000512909 TRAPPC5Q8IUR0 188 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 TRAM1L1Q8N609 369 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 OTUD6BQ8N6M0 293 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 OR4K2Q8NGD2 314 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 BRSK1Q8TDC3 778 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 FAM222BQ8WU58 562 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 NAT14Q8WUY8 206 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 C1orf54Q8WWF1 131 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 TMEM45BQ96B21 275 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 TADA1Q96BN2 335 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 FAF2Q96CS3 445 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 ZNF578Q96N58 590 aaPredicted RBP3.4□□□□□ -1.87
HTT-210ENST00000512909 FAM111AQ96PZ2 611 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 TMEM237Q96Q45 408 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 ATOH8Q96SQ7 321 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 VAT1Q99536 393 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 CTRCQ99895 268 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 TBL1YQ9BQ87 522 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 TMEM121Q9BTD3 319 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 ZSCAN5AQ9BUG6 496 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 TSGA10Q9BZW7 698 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 SLC7A5P2Q9GIP4 190 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 CXXC4Q9H2H0 198 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 Q9HAA7 133 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 CRLS1Q9UJA2 301 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 ZNF346Q9UL40 294 aaKnown RBP3.4□□□□□ -1.87
HTT-210ENST00000512909 SLC17A4Q9Y2C5 497 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 PPIL1Q9Y3C6 166 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 ZNF175Q9Y473 711 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 ARL5AQ9Y689 179 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 KIAA1549LQ6ZVL6 1849 aa3.4□□□□□ -1.87
HTT-210ENST00000512909 LOC285095A0A1B0GVY8 99 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 OR5K4A6NMS3 321 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 ZNF724A8MTY0 619 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 ZNF487B1APH4 448 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 NUDT21O43809 227 aaKnown RBP3.39□□□□□ -1.87
HTT-210ENST00000512909 DUX1O43812 170 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 CCL4P13236 92 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 CD1CP29017 333 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 SHC1P29353 583 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 HADHBP55084 474 aaKnown RBP3.39□□□□□ -1.87
HTT-210ENST00000512909 MTTPP55157 894 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 HERVK_113P63132 956 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 ERVK-8P63133 956 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 GAMTQ14353 236 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 POU6F1Q14863 301 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 TAF1AQ15573 450 aaPredicted RBP3.39□□□□□ -1.87
HTT-210ENST00000512909 TGIF1Q15583 401 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 TRIP13Q15645 432 aaPredicted RBP3.39□□□□□ -1.87
HTT-210ENST00000512909 PARP6Q2NL67 630 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 LDLRAP1Q5SW96 308 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 BEND6Q5SZJ8 279 aaPredicted RBP3.39□□□□□ -1.87
HTT-210ENST00000512909 KDELC1Q6UW63 502 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 DPY19L2P2Q6ZN68 376 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 FAM92BQ6ZTR7 304 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 GOLGA7Q7Z5G4 137 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 P2RY8Q86VZ1 359 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 AMZ2Q86W34 360 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 PHC2Q8IXK0 858 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 LMNTD2Q8IXW0 634 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 LYG1Q8N1E2 194 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 RNF10Q8N5U6 811 aaKnown RBP3.39□□□□□ -1.87
HTT-210ENST00000512909 POM121L12Q8N7R1 296 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 CHDHQ8NE62 594 aaPredicted RBP3.39□□□□□ -1.87
HTT-210ENST00000512909 CCDC112Q8NEF3 446 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 OR4E2Q8NGC2 313 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 OR4Q3Q8NH05 313 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 RHOXF1Q8NHV9 184 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 SLC37A2Q8TED4 501 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 SKA2Q8WVK7 121 aaPredicted RBP3.39□□□□□ -1.87
HTT-210ENST00000512909 N4BP2L2Q92802 583 aaPredicted RBP3.39□□□□□ -1.87
HTT-210ENST00000512909 ART4Q93070 314 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 C11orf52Q96A22 123 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 PINX1Q96BK5 328 aaKnown RBP3.39□□□□□ -1.87
HTT-210ENST00000512909 TGM7Q96PF1 710 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 QKIQ96PU8 341 aaKnown RBP eCLIP3.39□□□□□ -1.87
HTT-210ENST00000512909 MCCC1Q96RQ3 725 aaPredicted RBP3.39□□□□□ -1.87
HTT-210ENST00000512909 TBC1D10AQ9BXI6 508 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 ERVK-6Q9BXR3 956 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 TRABDQ9H4I3 376 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 IL1RL2Q9HB29 575 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 IL26Q9NPH9 171 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 IMP3Q9NV31 184 aaKnown RBP3.39□□□□□ -1.87
HTT-210ENST00000512909 SENP1Q9P0U3 644 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 SLC23A2Q9UGH3 650 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 ZNF490Q9ULM2 529 aaPredicted RBP3.39□□□□□ -1.87
HTT-210ENST00000512909 U3KQA8 63 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 EML5Q05BV3 1969 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 VCANP13611 3396 aa3.39□□□□□ -1.87
HTT-210ENST00000512909 TRIOO75962 3097 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 FANCMQ8IYD8 2048 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 IGHV1OR21-1A0A087WYE8 117 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 TRBV5-4A0A0C4DH59 114 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 IGHV5-10-1A0A0J9YXX1 117 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 GSAPA4D1B5 854 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 OR6C74A6NCV1 312 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 OR52A4PA6NMU1 304 aa3.38□□□□□ -1.87
HTT-210ENST00000512909 BTNL10A8MVZ5 291 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms