RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 SSX8Q7RTT4 187 aa6.04□□□□□ -1.44
RFC1-215ENST00000512881 P2RY8Q86VZ1 359 aa6.04□□□□□ -1.44
RFC1-215ENST00000512881 CMIPQ8IY22 773 aa6.04□□□□□ -1.44
RFC1-215ENST00000512881 UBE2J2Q8N2K1 259 aa6.04□□□□□ -1.44
RFC1-215ENST00000512881 GLB1L3Q8NCI6 653 aaPredicted RBP6.04□□□□□ -1.44
RFC1-215ENST00000512881 KBTBD8Q8NFY9 601 aa6.04□□□□□ -1.44
RFC1-215ENST00000512881 PIGXQ8TBF5 258 aa6.04□□□□□ -1.44
RFC1-215ENST00000512881 PNPT1Q8TCS8 783 aaKnown RBP6.04□□□□□ -1.44
RFC1-215ENST00000512881 MGARPQ8TDB4 240 aa6.04□□□□□ -1.44
RFC1-215ENST00000512881 PMM1Q92871 262 aa6.04□□□□□ -1.44
RFC1-215ENST00000512881 APH1AQ96BI3 265 aa6.04□□□□□ -1.44
RFC1-215ENST00000512881 TRMT61AQ96FX7 289 aaKnown RBP6.04□□□□□ -1.44
RFC1-215ENST00000512881 TRIM2Q9C040 744 aa6.04□□□□□ -1.44
RFC1-215ENST00000512881 PIF1Q9H611 641 aa6.04□□□□□ -1.44
RFC1-215ENST00000512881 ZMAT4Q9H898 229 aa6.04□□□□□ -1.44
RFC1-215ENST00000512881 CISD1Q9NZ45 108 aaKnown RBP6.04□□□□□ -1.44
RFC1-215ENST00000512881 TMEM181Q9P2C4 612 aa6.04□□□□□ -1.44
RFC1-215ENST00000512881 OSGIN1Q9UJX0 560 aa6.04□□□□□ -1.44
RFC1-215ENST00000512881 NOSIPQ9Y314 301 aaKnown RBP6.04□□□□□ -1.44
RFC1-215ENST00000512881 TMED7Q9Y3B3 224 aa6.04□□□□□ -1.44
RFC1-215ENST00000512881 MAGED1Q9Y5V3 778 aaPredicted RBP6.04□□□□□ -1.44
RFC1-215ENST00000512881 A0A1W2PP18 115 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 CIB4A0PJX0 185 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 TMEM72A0PK05 275 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 CFAP73A6NFT4 308 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 OR5H1A6NKK0 313 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 CCT8L1PA6NM43 557 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 SHISA9B4DS77 424 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 SLCO1B7G3V0H7 640 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 FAAHO00519 579 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 RFXANKO14593 260 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 ABCD4O14678 606 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 ZNF208O43345 1280 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 EIF1BO60739 113 aaKnown RBP6.03□□□□□ -1.44
RFC1-215ENST00000512881 MRPL33O75394 65 aaKnown RBP6.03□□□□□ -1.44
RFC1-215ENST00000512881 CD8AP01732 235 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 IL6P05231 212 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 DBIP07108 87 aaKnown RBP6.03□□□□□ -1.44
RFC1-215ENST00000512881 VSIG10L2P0DP72 767 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 IDO1P14902 403 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 IL7RP16871 459 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 RPS4Y1P22090 263 aaKnown RBP6.03□□□□□ -1.44
RFC1-215ENST00000512881 TACR3P29371 465 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 IDUAP35475 653 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 CDKN1AP38936 164 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 MAGEA8P43361 318 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 MAP2K6P52564 334 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 SLC16A1P53985 500 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 SLC18A1P54219 525 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 MAGOHP61326 146 aaKnown RBP6.03□□□□□ -1.44
RFC1-215ENST00000512881 FAPQ12884 760 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 EPS8Q12929 822 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 MAPK11Q15759 364 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 GSTA3Q16772 222 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 CLEC12BQ2HXU8 276 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 PGGHGQ32M88 737 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 SLC9B1Q4ZJI4 515 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 PDCD4Q53EL6 469 aaKnown RBP6.03□□□□□ -1.44
RFC1-215ENST00000512881 ATG16L1Q676U5 607 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 PEX5LQ8IYB4 626 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 WDR60Q8WVS4 1066 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 DDIT4LQ96D03 193 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 RADILQ96JH8 1075 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 MUS81Q96NY9 551 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 NAA11Q9BSU3 229 aaPredicted RBP6.03□□□□□ -1.44
RFC1-215ENST00000512881 POFUT1Q9H488 388 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 MANSC1Q9H8J5 431 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 SLC6A13Q9NSD5 602 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 RLIMQ9NVW2 624 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 PARPBPQ9NWS1 579 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 ASB6Q9NWX5 421 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 NPAP1Q9NZP6 1156 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 COL6A5A8TX70 2615 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 PRR14LQ5THK1 2151 aa6.03□□□□□ -1.44
RFC1-215ENST00000512881 NUP214P35658 2090 aaPredicted RBP6.02□□□□□ -1.45
RFC1-215ENST00000512881 A0A0A6YYJ9 748 aa6.02□□□□□ -1.45
RFC1-215ENST00000512881 A0A1W2PR80 420 aa6.02□□□□□ -1.45
RFC1-215ENST00000512881 UBE2QL1A1L167 161 aa6.02□□□□□ -1.45
RFC1-215ENST00000512881 CDHR4A6H8M9 788 aa6.02□□□□□ -1.45
RFC1-215ENST00000512881 INAFM1C9JVW0 142 aa6.02□□□□□ -1.45
RFC1-215ENST00000512881 PDLIM1O00151 329 aa6.02□□□□□ -1.45
RFC1-215ENST00000512881 UBDO15205 165 aa6.02□□□□□ -1.45
RFC1-215ENST00000512881 RAD51DO75771 328 aa6.02□□□□□ -1.45
RFC1-215ENST00000512881 ANP32DO95626 131 aa6.02□□□□□ -1.45
RFC1-215ENST00000512881 IGHV4-39P01824 125 aa6.02□□□□□ -1.45
RFC1-215ENST00000512881 TFPTP0C1Z6 253 aa6.02□□□□□ -1.45
RFC1-215ENST00000512881 GKN3PP0CG01 181 aa6.02□□□□□ -1.45
RFC1-215ENST00000512881 ZCCHC18P0CG32 403 aa6.02□□□□□ -1.45
RFC1-215ENST00000512881 ETFAP13804 333 aa6.02□□□□□ -1.45
RFC1-215ENST00000512881 UQCRBP14927 111 aa6.02□□□□□ -1.45
RFC1-215ENST00000512881 PTNP21246 168 aa6.02□□□□□ -1.45
RFC1-215ENST00000512881 CXCR1P25024 350 aa6.02□□□□□ -1.45
RFC1-215ENST00000512881 PTAFRP25105 342 aa6.02□□□□□ -1.45
RFC1-215ENST00000512881 ACAA2P42765 397 aaKnown RBP6.02□□□□□ -1.45
RFC1-215ENST00000512881 CRATP43155 626 aa6.02□□□□□ -1.45
RFC1-215ENST00000512881 ZNF83P51522 516 aa6.02□□□□□ -1.45
RFC1-215ENST00000512881 MVDP53602 400 aa6.02□□□□□ -1.45
RFC1-215ENST00000512881 CDH11P55287 796 aa6.02□□□□□ -1.45
RFC1-215ENST00000512881 FOXG1P55316 489 aaPredicted RBP6.02□□□□□ -1.45
RFC1-215ENST00000512881 PPP2R2BQ00005 443 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms