RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 GPRIN2O60269 458 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 CREBL2O60519 120 aaPredicted RBP8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 ITGA10O75578 1167 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 GPANK1O95872 356 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 TGM6O95932 706 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 ITPKBP27987 946 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 MAP2K6P52564 334 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 ART1P52961 327 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 MAT1AQ00266 395 aaKnown RBP8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 EXOSC6Q5RKV6 272 aaKnown RBP8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 SP7Q8TDD2 431 aaPredicted RBP8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 WDR92Q96MX6 357 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 FOXN4Q96NZ1 517 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 LMF1Q96S06 567 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 NUPL2O15504 423 aaKnown RBP8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 ACSM4P0C7M7 580 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 COL9A1P20849 921 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 CAPZA2P47755 286 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 TAS2R20P59543 309 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 GAS6Q14393 721 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 OR6V1Q8N148 313 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 OR5M1Q8NGP8 315 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 THEM6Q8WUY1 208 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 MYADMQ96S97 322 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 RXFP3Q9NSD7 469 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 PRELID1Q9Y255 219 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 AUP1Q9Y679 476 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 LTBP2Q14767 1821 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 A0A1B0GUH1 482 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 TNFSF14O43557 240 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 ECDO95905 644 aaPredicted RBP8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 RBM34P42696 430 aaKnown RBP8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 CTXN1P60606 82 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 GPM6BQ13491 265 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 ENPP2Q13822 863 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 C2orf68Q2NKX9 166 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 FAM109BQ6ICB4 259 aaPredicted RBP8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 POMZP3Q6PJE2 187 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 GLDNQ6ZMI3 551 aaPredicted RBP8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 MAMSTRQ6ZN01 415 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 DPY19L2P2Q6ZN68 376 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 METTL27Q8N6F8 245 aaPredicted RBP8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 LSMEM1Q8N8F7 131 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 MARVELD3Q96A59 401 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 SIPA1Q96FS4 1042 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 RADILQ96JH8 1075 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 TCEAL2Q9H3H9 227 aaPredicted RBP8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 CNTRLQ7Z7A1 2325 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 TRAV8-7A0A075B6U6 113 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 K7EQS6 105 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 LGALS8O00214 317 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 PRAF2O60831 178 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 IFNGR1P15260 489 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 NFYAP23511 347 aaPredicted RBP8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 KIR2DL1P43626 348 aaPredicted RBP8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 BTG2P78543 158 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 BTN1A1Q13410 526 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 LINC01590Q5TEZ4 76 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 PARM1Q6UWI2 310 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 ZNF550Q7Z398 422 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 GLB1L2Q8IW92 636 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 SLC35F3Q8IY50 421 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 OR51A4Q8NGJ6 313 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 FGF14Q92915 247 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 CXorf58Q96LI9 332 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 MOGAT1Q96PD6 335 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 KCNK15Q9H427 330 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 RNF215Q9Y6U7 377 aa8.45□□□□□ -1.06
LIMCH1-215ENST00000512632 FXYD6-FXYD2A0A087WZ82 144 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 PLSCR5A0PG75 271 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 ANKRD20A5PA0PJZ0 165 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 CA3P07451 260 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 SLC35E2P0CK97 266 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 HOXB2P14652 356 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 S1PR1P21453 382 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 GUCA2AQ02747 115 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 NFATC4Q14934 902 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 SZT2Q5T011 3432 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 FAM198BQ6UWH4 519 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 KIAA1324Q6UXG2 1013 aaKnown RBP8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 NPSR1Q6W5P4 371 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 ZNF676Q8N7Q3 588 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 FAM71CQ8NEG0 241 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 OR5AK2Q8NH90 309 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 ZDHHC1Q8WTX9 485 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 LINC00052Q96N35 136 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 ELF4Q99607 663 aaPredicted RBP8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 FXYD6Q9H0Q3 95 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 SLITRK2Q9H156 845 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 TAS2R5Q9NYW4 299 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 FRRS1LQ9P0K9 344 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 GTF2A1LQ9UNN4 478 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 A0A087WUJ7 227 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 ANXA2P2A6NMY6 339 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 MCRIP1C9JLW8 97 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 TGFBR3LH3BV60 316 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 CDK2AP1O14519 115 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 GLCEO94923 617 aa8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 ANXA2P07355 339 aaKnown RBP8.44□□□□□ -1.06
LIMCH1-215ENST00000512632 PPM1FP49593 454 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms