RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 PHYHD1Q5SRE7 291 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 SHEQ5VZ18 495 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 SLC22A25Q6T423 547 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 DEF8Q6ZN54 512 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 SPATA21Q7Z572 469 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 LRRC75A-AS1Q8N1F1 130 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 OR2T12Q8NG77 320 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 OR1K1Q8NGR3 316 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 PROX1Q92786 737 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 SLC41A3Q96GZ6 507 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 TXNDC15Q96J42 360 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 OR2M2Q96R28 347 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 EPYCQ99645 322 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 TMEM43Q9BTV4 400 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 GSX2Q9BZM3 304 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 EVA1AQ9H8M9 152 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 MRGBPQ9NV56 204 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 MED29Q9NX70 200 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 CISD1Q9NZ45 108 aaKnown RBP11.63□□□□□ -0.55
RNF4-215ENST00000511843 B3GALT5Q9Y2C3 310 aa11.63□□□□□ -0.55
RNF4-215ENST00000511843 CR1P17927 2039 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 TRAPPC13A5PLN9 417 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 E7EQL1 145 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 C11orf98E9PRG8 122 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 ARHGEF9O43307 516 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 NDUFS7O75251 213 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 SLC43A1O75387 559 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 CH25HO95992 272 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 AHCYP23526 432 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 ARF1P84077 181 aaKnown RBP11.62□□□□□ -0.55
RNF4-215ENST00000511843 POU3F1Q03052 451 aaPredicted RBP11.62□□□□□ -0.55
RNF4-215ENST00000511843 TBRG1Q3YBR2 411 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 CYBRD1Q53TN4 286 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 SWT1Q5T5J6 900 aaKnown RBP11.62□□□□□ -0.55
RNF4-215ENST00000511843 HMBOX1Q6NT76 420 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 TTC33Q6PID6 262 aaPredicted RBP11.62□□□□□ -0.55
RNF4-215ENST00000511843 KLHL17Q6TDP4 642 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 KLHL24Q6TFL4 600 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 TMEM108Q6UXF1 575 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 Q71RC1 249 aaPredicted RBP11.62□□□□□ -0.55
RNF4-215ENST00000511843 ABHD12BQ7Z5M8 362 aaPredicted RBP11.62□□□□□ -0.55
RNF4-215ENST00000511843 UEVLDQ8IX04 471 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 MICU2Q8IYU8 434 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 TMEM123Q8N131 208 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 C17orf78Q8N4C9 275 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 LRRC17Q8N6Y2 441 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 RP9Q8TA86 221 aaKnown RBP11.62□□□□□ -0.55
RNF4-215ENST00000511843 BCL2L2Q92843 193 aaPredicted RBP11.62□□□□□ -0.55
RNF4-215ENST00000511843 TPD52L3Q96J77 140 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 PRSS27Q9BQR3 290 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 LINC00470Q9BZP3 86 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 NELFAQ9H3P2 528 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 CXorf56Q9H5V9 222 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 SEC61A2Q9H9S3 476 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 POU2F3Q9UKI9 436 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 RCE1Q9Y256 329 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 AMDHD2Q9Y303 409 aa11.62□□□□□ -0.55
RNF4-215ENST00000511843 ATP6V1G2-DDX39BF2Z307 99 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 H7C1Q1 480 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 M0R3G1 203 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 NME4O00746 187 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 PLPP3O14495 311 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 SMAD7O15105 426 aaKnown RBP11.61□□□□□ -0.55
RNF4-215ENST00000511843 SLC22A2O15244 555 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 ATP8B1O43520 1251 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 CCDC22O60826 627 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 CD8AP01732 235 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 FUT4P22083 530 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 PTAFRP25105 342 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 KDELR2P33947 212 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 SLC7A2P52569 658 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 ATP5J2P56134 94 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 PRPS1P60891 318 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 LIPEQ05469 1076 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 PUDPQ08623 228 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 VEZF1Q14119 521 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 ZNF74Q16587 644 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 CEACAM16Q2WEN9 425 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 ERICH5Q6P6B1 374 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 NHLRC1Q6VVB1 395 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 NKAIN4Q8IVV8 208 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 SLC15A3Q8IY34 581 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 ADPRHL1Q8NDY3 354 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 OR6S1Q8NH40 331 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 RASSF5Q8WWW0 418 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 GTPBP3Q969Y2 492 aaKnown RBP11.61□□□□□ -0.55
RNF4-215ENST00000511843 RADILQ96JH8 1075 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 PCDHAC1Q9H158 963 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 CRLF2Q9HC73 371 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 GPR35Q9HC97 309 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 ZNF701Q9NV72 531 aaPredicted RBP11.61□□□□□ -0.55
RNF4-215ENST00000511843 MRPL39Q9NYK5 338 aaKnown RBP11.61□□□□□ -0.55
RNF4-215ENST00000511843 CORINQ9Y5Q5 1042 aa11.61□□□□□ -0.55
RNF4-215ENST00000511843 ARFGEF3Q5TH69 2177 aa11.6□□□□□ -0.55
RNF4-215ENST00000511843 IGHV1-18A0A0C4DH31 117 aa11.6□□□□□ -0.55
RNF4-215ENST00000511843 ELOVL7A1L3X0 281 aa11.6□□□□□ -0.55
RNF4-215ENST00000511843 SLC35F4A4IF30 521 aa11.6□□□□□ -0.55
RNF4-215ENST00000511843 ZNF503-AS2A6NEH8 195 aa11.6□□□□□ -0.55
RNF4-215ENST00000511843 OVOL3O00110 214 aa11.6□□□□□ -0.55
RNF4-215ENST00000511843 PIP5K1CO60331 668 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms