RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 PRSS42Q7Z5A4 293 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 SLITRK4Q8IW52 837 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 LSMEM1Q8N8F7 131 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 OR13C2Q8NGS9 318 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 GRHL3Q8TE85 626 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 THAP4Q8WY91 577 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 YIPF5Q969M3 257 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 SMIM19Q96E16 107 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 ZNF426Q9BUY5 554 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 HCAR1Q9BXC0 346 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 CACNG6Q9BXT2 260 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 PPIL3Q9H2H8 161 aaKnown RBP10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 ZNF768Q9H5H4 540 aaKnown RBP10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 Q9N2J8 555 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 KLHL1Q9NR64 748 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 WDR70Q9NW82 654 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 SEMA5BQ9P283 1151 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 OR10H1Q9Y4A9 318 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 ASCC3Q8N3C0 2202 aaKnown RBP10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 E9PI62 339 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 AKR7A2O43488 359 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 PPM1BO75688 479 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 UCHL1P09936 223 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 EPXP11678 715 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 M6PRP20645 277 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 PSMD4P55036 377 aaKnown RBP10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 AP3S2P59780 193 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 SIRPAP78324 504 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 SERTAD2Q14140 314 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 CRMP1Q14194 572 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 NDUFAF6Q330K2 333 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 UBE2NLQ5JXB2 153 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 FAAH2Q6GMR7 532 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 B3GLCTQ6Y288 498 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 THSD4Q6ZMP0 1018 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 BCORP1Q8N888 145 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 ZSCAN1Q8NBB4 408 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 OR4C3Q8NH37 302 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 MVB12AQ96EY5 273 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 OR1F2PQ96R84 312 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 CNN2Q99439 309 aaKnown RBP10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 OR8D2Q9GZM6 311 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 ENKD1Q9H0I2 346 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 ZNF304Q9HCX3 659 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 NUDT15Q9NV35 164 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 DNAJB12Q9NXW2 375 aaKnown RBP10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 ST6GALNAC2Q9UJ37 374 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 FBXO4Q9UKT5 387 aa10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 ELF5Q9UKW6 265 aaPredicted RBP10.06□□□□□ -0.8
SH3RF1-203ENST00000508685 IGKV3D-11A0A0A0MRZ8 115 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 A0A1B0GX78 115 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 A0A1W2PQM1 296 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 LINC00862A6NCI5 91 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 SULT1B1O43704 296 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 NDUFB2O95178 105 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 PPP1R3DO95685 299 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 TPOP07202 933 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 H2AFB2P0C5Z0 115 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 C4BPBP20851 252 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 FBLP22087 321 aaKnown RBP10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 ACVR1BP36896 505 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 GPR143P51810 404 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 PER3P56645 1201 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 SLC37A1P57057 533 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 OR10A3P58181 314 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 SNTB2Q13425 540 aaKnown RBP10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 CDK5R1Q15078 307 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 PON3Q15166 354 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 CDONQ4KMG0 1287 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 ULK3Q6PHR2 472 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 LYPD4Q6UWN0 246 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 UNQ9370/PRO34162Q6UXP9 181 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 SHISA6Q6ZSJ9 500 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 HDDC2Q7Z4H3 204 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 TMEM151BQ8IW70 566 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 OR51A7Q8NH64 312 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 ATOH1Q92858 354 aaPredicted RBP10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 ZNF578Q96N58 590 aaPredicted RBP10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 CCNL2Q96S94 520 aaPredicted RBP10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 DUSP23Q9BVJ7 150 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 GAREM1Q9H706 876 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 NRIP3Q9NQ35 241 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 MEPEQ9NQ76 525 aaPredicted RBP10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 FLRT3Q9NZU0 649 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 CTSFQ9UBX1 484 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 ZNF222Q9UK12 451 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 MGAT4AQ9UM21 535 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 ADAMTS9Q9P2N4 1935 aa10.05□□□□□ -0.8
SH3RF1-203ENST00000508685 MEIKINA0A087WXM9 373 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 ZC3H12DA2A288 527 aaKnown RBP10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 NPIPB9F8W1W9 429 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 DVL2O14641 736 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 TFPIP10646 304 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 GDI2P50395 445 aaKnown RBP10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 AP2S1P53680 142 aaPredicted RBP10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 MRPS10P82664 201 aaKnown RBP10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 IL10RAQ13651 578 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 SLC25A35Q3KQZ1 300 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 ARHGAP40Q5TG30 622 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms