RNA–Protein interactions for RNA: ENST00000508619.1

LINC02171-201, Transcript of long intergenic non-protein coding RNA 2171, humanhuman

TSL 1 (best) BASIC

Gene LINC02171, Length 1,033 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02171-201ENST00000508619 NPHS2Q9NP85 383 aa11.79□□□□□ -0.52
LINC02171-201ENST00000508619 MRPL39Q9NYK5 338 aaKnown RBP11.79□□□□□ -0.52
LINC02171-201ENST00000508619 FBXO9Q9UK97 447 aaPredicted RBP11.79□□□□□ -0.52
LINC02171-201ENST00000508619 CHP2O43745 196 aa11.78□□□□□ -0.52
LINC02171-201ENST00000508619 TPST2O60704 377 aa11.78□□□□□ -0.52
LINC02171-201ENST00000508619 UPK3AO75631 287 aa11.78□□□□□ -0.52
LINC02171-201ENST00000508619 NPPAP01160 153 aa11.78□□□□□ -0.52
LINC02171-201ENST00000508619 IGKV3-15P01624 115 aa11.78□□□□□ -0.52
LINC02171-201ENST00000508619 VIMP08670 466 aaKnown RBP11.78□□□□□ -0.52
LINC02171-201ENST00000508619 CSF3P09919 207 aa11.78□□□□□ -0.52
LINC02171-201ENST00000508619 ACVR1BP36896 505 aa11.78□□□□□ -0.52
LINC02171-201ENST00000508619 FABP6P51161 128 aa11.78□□□□□ -0.52
LINC02171-201ENST00000508619 CLDN17P56750 224 aa11.78□□□□□ -0.52
LINC02171-201ENST00000508619 ROR2Q01974 943 aaKnown RBP11.78□□□□□ -0.52
LINC02171-201ENST00000508619 KRTAP1-1Q07627 177 aa11.78□□□□□ -0.52
LINC02171-201ENST00000508619 DMTNQ08495 405 aa11.78□□□□□ -0.52
LINC02171-201ENST00000508619 C1DQ13901 141 aaKnown RBP11.78□□□□□ -0.52
LINC02171-201ENST00000508619 NFYCQ13952 458 aa11.78□□□□□ -0.52
LINC02171-201ENST00000508619 TRMT5Q32P41 509 aaKnown RBP11.78□□□□□ -0.52
LINC02171-201ENST00000508619 HIKESHIQ53FT3 197 aa11.78□□□□□ -0.52
LINC02171-201ENST00000508619 LINC00114Q6XXX2 140 aa11.78□□□□□ -0.52
LINC02171-201ENST00000508619 Q71RC1 249 aaPredicted RBP11.78□□□□□ -0.52
LINC02171-201ENST00000508619 CCDC80Q76M96 950 aa11.78□□□□□ -0.52
LINC02171-201ENST00000508619 ZNF627Q7L945 461 aa11.78□□□□□ -0.52
LINC02171-201ENST00000508619 LINGO2Q7L985 606 aa11.78□□□□□ -0.52
LINC02171-201ENST00000508619 TMEM123Q8N131 208 aa11.78□□□□□ -0.52
LINC02171-201ENST00000508619 OR10H5Q8NGA6 315 aa11.78□□□□□ -0.52
LINC02171-201ENST00000508619 SH3GL1Q99961 368 aa11.78□□□□□ -0.52
LINC02171-201ENST00000508619 ASPNQ9BXN1 380 aa11.78□□□□□ -0.52
LINC02171-201ENST00000508619 CACNG6Q9BXT2 260 aa11.78□□□□□ -0.52
LINC02171-201ENST00000508619 NELFAQ9H3P2 528 aa11.78□□□□□ -0.52
LINC02171-201ENST00000508619 NOX1Q9Y5S8 564 aa11.78□□□□□ -0.52
LINC02171-201ENST00000508619 IGHV1-18A0A0C4DH31 117 aa11.77□□□□□ -0.53
LINC02171-201ENST00000508619 A0A0G2JND7 137 aa11.77□□□□□ -0.53
LINC02171-201ENST00000508619 M0QX08 132 aa11.77□□□□□ -0.53
LINC02171-201ENST00000508619 SASH3O75995 380 aa11.77□□□□□ -0.53
LINC02171-201ENST00000508619 CRYAAP02489 173 aa11.77□□□□□ -0.53
LINC02171-201ENST00000508619 BGLAPP02818 100 aa11.77□□□□□ -0.53
LINC02171-201ENST00000508619 AQP1P29972 269 aa11.77□□□□□ -0.53
LINC02171-201ENST00000508619 NUDT6P53370 316 aa11.77□□□□□ -0.53
LINC02171-201ENST00000508619 MTPNP58546 118 aa11.77□□□□□ -0.53
LINC02171-201ENST00000508619 PPP2R2BQ00005 443 aa11.77□□□□□ -0.53
LINC02171-201ENST00000508619 PUDPQ08623 228 aa11.77□□□□□ -0.53
LINC02171-201ENST00000508619 DUSP7Q16829 419 aa11.77□□□□□ -0.53
LINC02171-201ENST00000508619 NHLRC1Q6VVB1 395 aa11.77□□□□□ -0.53
LINC02171-201ENST00000508619 PXKQ7Z7A4 578 aa11.77□□□□□ -0.53
LINC02171-201ENST00000508619 IL17RDQ8NFM7 739 aa11.77□□□□□ -0.53
LINC02171-201ENST00000508619 GPR32P1Q8NGA4 272 aa11.77□□□□□ -0.53
LINC02171-201ENST00000508619 OR4F15Q8NGB8 312 aa11.77□□□□□ -0.53
LINC02171-201ENST00000508619 OR8J3Q8NGG0 315 aa11.77□□□□□ -0.53
LINC02171-201ENST00000508619 MPP4Q96JB8 637 aa11.77□□□□□ -0.53
LINC02171-201ENST00000508619 OR2M2Q96R28 347 aa11.77□□□□□ -0.53
LINC02171-201ENST00000508619 RHNO1Q9BSD3 238 aa11.77□□□□□ -0.53
LINC02171-201ENST00000508619 C1QTNF6Q9BXI9 259 aa11.77□□□□□ -0.53
LINC02171-201ENST00000508619 SLC19A3Q9BZV2 496 aa11.77□□□□□ -0.53
LINC02171-201ENST00000508619 ATP23Q9Y6H3 246 aa11.77□□□□□ -0.53
LINC02171-201ENST00000508619 PMF1-BGLAPU3KQ54 211 aa11.77□□□□□ -0.53
LINC02171-201ENST00000508619 CR1P17927 2039 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 BBIP1A8MTZ0 92 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 ZNF99A8MXY4 864 aaPredicted RBP11.76□□□□□ -0.53
LINC02171-201ENST00000508619 RNF223E7ERA6 249 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 ATP6V1G2-DDX39BF2Z307 99 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 TLX2O43763 284 aaPredicted RBP11.76□□□□□ -0.53
LINC02171-201ENST00000508619 NDUFS7O75251 213 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 IGF2P01344 180 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 TROVE2P10155 538 aaKnown RBP eCLIP11.76□□□□□ -0.53
LINC02171-201ENST00000508619 CBR1P16152 277 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 CDH2P19022 906 aaPredicted RBP11.76□□□□□ -0.53
LINC02171-201ENST00000508619 GZMMP51124 257 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 EFNA4P52798 201 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 CDH12P55289 794 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 NAAAQ02083 359 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 CYLC2Q14093 348 aaPredicted RBP11.76□□□□□ -0.53
LINC02171-201ENST00000508619 RAB35Q15286 201 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 SWI5Q1ZZU3 235 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 VMACQ2NL98 169 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 CLEC2AQ6UVW9 174 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 SNX32Q86XE0 403 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 UEVLDQ8IX04 471 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 C20orf196Q8IYI0 205 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 KDM8Q8N371 416 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 GPR137CQ8N3F9 429 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 SMYD1Q8NB12 490 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 NUP37Q8NFH4 326 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 OR6T1Q8NGN1 323 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 MCHR1Q99705 422 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 KCNS3Q9BQ31 491 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 ZNF426Q9BUY5 554 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 POLR2J2Q9GZM3 115 aaKnown RBP11.76□□□□□ -0.53
LINC02171-201ENST00000508619 POLR2J3Q9H1A7 115 aaKnown RBP11.76□□□□□ -0.53
LINC02171-201ENST00000508619 DENND2DQ9H6A0 471 aaPredicted RBP11.76□□□□□ -0.53
LINC02171-201ENST00000508619 CRLF2Q9HC73 371 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 GPR35Q9HC97 309 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 SEC14L4Q9UDX3 406 aa11.76□□□□□ -0.53
LINC02171-201ENST00000508619 GDF2Q9UK05 429 aaPredicted RBP11.76□□□□□ -0.53
LINC02171-201ENST00000508619 COL6A5A8TX70 2615 aa11.75□□□□□ -0.53
LINC02171-201ENST00000508619 A0A096LNT2 108 aa11.75□□□□□ -0.53
LINC02171-201ENST00000508619 MS4A18H0YCH9 400 aa11.75□□□□□ -0.53
LINC02171-201ENST00000508619 M0R3H8 397 aa11.75□□□□□ -0.53
LINC02171-201ENST00000508619 PLPP3O14495 311 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms