RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 FAM153BP0C7A2 387 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 NAT2P11245 290 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 UQCRBP14927 111 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 CBR1P16152 277 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 IL7RP16871 459 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 KRT4P19013 534 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 NCF2P19878 526 aaPredicted RBP4.95□□□□□ -1.62
GYPB-208ENST00000507009 PRPS1L1P21108 318 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 ZFP36P26651 326 aaKnown RBP4.95□□□□□ -1.62
GYPB-208ENST00000507009 NOS3P29474 1203 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 ALDH3A1P30838 453 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 LIMS1P48059 325 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 NME5P56597 212 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 UBA52P62987 128 aaKnown RBP4.95□□□□□ -1.62
GYPB-208ENST00000507009 MYBPC1Q00872 1141 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 C1DQ13901 141 aaKnown RBP4.95□□□□□ -1.62
GYPB-208ENST00000507009 NKPD1Q17RQ9 610 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 MSMPQ1L6U9 139 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 CEACAM16Q2WEN9 425 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 TRMT5Q32P41 509 aaKnown RBP4.95□□□□□ -1.62
GYPB-208ENST00000507009 MRPL2Q5T653 305 aaKnown RBP4.95□□□□□ -1.62
GYPB-208ENST00000507009 DCAF12L2Q5VW00 463 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 TRMT10CQ7L0Y3 403 aaKnown RBP4.95□□□□□ -1.62
GYPB-208ENST00000507009 RIBC1Q8N443 379 aaPredicted RBP4.95□□□□□ -1.62
GYPB-208ENST00000507009 NATD1Q8N6N6 113 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 ANKFN1Q8N957 763 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 ICA1LQ8NDH6 482 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 FAM71CQ8NEG0 241 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 PSMA8Q8TAA3 256 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 PNPT1Q8TCS8 783 aaKnown RBP4.95□□□□□ -1.62
GYPB-208ENST00000507009 MGARPQ8TDB4 240 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 MZB1Q8WU39 189 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 ANP32BQ92688 251 aaKnown RBP4.95□□□□□ -1.62
GYPB-208ENST00000507009 RDH5Q92781 318 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 TAF15Q92804 592 aaKnown RBP eCLIP4.95□□□□□ -1.62
GYPB-208ENST00000507009 YIPF5Q969M3 257 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 C16orf45Q96MC5 204 aaPredicted RBP4.95□□□□□ -1.62
GYPB-208ENST00000507009 SLC35A5Q9BS91 424 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 SF3B5Q9BWJ5 86 aaKnown RBP4.95□□□□□ -1.62
GYPB-208ENST00000507009 NELFAQ9H3P2 528 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 ZNF665Q9H7R5 613 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 GPR35Q9HC97 309 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 EXOSC3Q9NQT5 275 aaKnown RBP4.95□□□□□ -1.62
GYPB-208ENST00000507009 RLIMQ9NVW2 624 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 MYEF2Q9P2K5 600 aaKnown RBP4.95□□□□□ -1.62
GYPB-208ENST00000507009 CRNNQ9UBG3 495 aaPredicted RBP4.95□□□□□ -1.62
GYPB-208ENST00000507009 SEC14L4Q9UDX3 406 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 ZDHHC2Q9UIJ5 367 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 MID2Q9UJV3 735 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 MGAM2Q2M2H8 2515 aa4.95□□□□□ -1.62
GYPB-208ENST00000507009 A0A0G2JMP0 313 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 A0A0X1KG70 313 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 TLDC2A0PJX2 215 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 PRAMEF27A3QJZ7 478 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 ISPDA4D126 451 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 A8MVM7 634 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 FRS3O43559 492 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 PLPP2O43688 288 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 ICMTO60725 284 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 NCR1O76036 304 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 ZNF432O94892 652 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 AHSA1O95433 338 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 IGKV3-15P01624 115 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 NUDT17P0C025 328 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 NR2F1P10589 423 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 ANPEPP15144 967 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 ZNF43P17038 809 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 ACHEP22303 614 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 UQCRC2P22695 453 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 NR4A1P22736 598 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 CRHR1P34998 444 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 ARR3P36575 388 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 RAD52P43351 418 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 MAGEB1P43366 347 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 RPS5P46782 204 aaKnown RBP4.94□□□□□ -1.62
GYPB-208ENST00000507009 PTDSS1P48651 473 aaKnown RBP4.94□□□□□ -1.62
GYPB-208ENST00000507009 AQP5P55064 265 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 SH3BGRP55822 239 aaPredicted RBP4.94□□□□□ -1.62
GYPB-208ENST00000507009 COPZ1P61923 177 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 LMO4P61968 165 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 CCL8P80075 99 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 LCN2P80188 198 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 GALK2Q01415 458 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 ZP4Q12836 540 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 EPS8Q12929 822 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 FOXL1Q12952 345 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 GNA13Q14344 377 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 CHI3L2Q15782 390 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 PDCD2Q16342 344 aaPredicted RBP4.94□□□□□ -1.62
GYPB-208ENST00000507009 WHAMMP3Q1A5X7 153 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 GSG1Q2KHT4 349 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 C11orf91Q3C1V1 193 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 UGT3A2Q3SY77 523 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 SLC9B1Q4ZJI4 515 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 PRR31Q5SQ13 230 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 C1orf140Q5VVS0 124 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 ACSM5Q6NUN0 579 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 RBMS3Q6XE24 437 aaKnown RBP4.94□□□□□ -1.62
GYPB-208ENST00000507009 RNF130Q86XS8 419 aa4.94□□□□□ -1.62
GYPB-208ENST00000507009 VRK2Q86Y07 508 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms