RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 ABHD12BQ7Z5M8 362 aaPredicted RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 SYT12Q8IV01 421 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 DCUN1D3Q8IWE4 304 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 DEFB107AQ8IZN7 70 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 LYG1Q8N1E2 194 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 HIST3H2BBQ8N257 126 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 ACBD7Q8N6N7 88 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 HJURPQ8NCD3 748 aaPredicted RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 ZNF485Q8NCK3 441 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 SUSD6Q92537 303 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 TMEM203Q969S6 136 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 PHF21BQ96EK2 531 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 RAX2Q96IS3 184 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 FCRL1Q96LA6 429 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 CCDC140Q96MF4 163 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 IL17FQ96PD4 163 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 TOR3AQ9H497 397 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 FAM96AQ9H5X1 160 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 PTGES2Q9H7Z7 377 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 PDFQ9HBH1 243 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 FAM118AQ9NWS6 357 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 MIOSQ9NXC5 875 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 PDP1Q9P0J1 537 aaPredicted RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 GDF2Q9UK05 429 aaPredicted RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 ICKQ9UPZ9 632 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 RAP2CQ9Y3L5 183 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 GLYATL1P3A0A0U1RQE8 302 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 TMEM150BA6NC51 233 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 IDSB3KWA1 339 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 LRRN3E7EW58 273 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 C1QTNF3-AMACRE9PGA6 284 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 H7C2Y5 167 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 KCNK1O00180 336 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 MID1O15344 667 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 GMFGO60234 142 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 TPST1O60507 370 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 SPDEFO95238 335 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 METTL18O95568 372 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 IFNA21P01568 189 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 CD5P06127 495 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 BCHEP06276 602 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 CELA2BP08218 269 aaPredicted RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 OR56A5P0C7T3 313 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 CPN1P15169 458 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 GOT1P17174 413 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 IDSP22304 550 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 NR2F2P24468 414 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 GTF2E2P29084 291 aaKnown RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 FMO3P31513 532 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 MARCKSL1P49006 195 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 PNLIPRP2P54317 469 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 ZNF648Q5T619 568 aaPredicted RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 PODNL1Q6PEZ8 512 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 FIGLAQ6QHK4 219 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 TMEM182Q6ZP80 229 aaPredicted RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 DPPA4Q7L190 304 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 PTAR1Q7Z6K3 402 aaPredicted RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 ZNF664Q8N3J9 261 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 CBR4Q8N4T8 237 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 TSEN15Q8WW01 171 aaKnown RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 MUS81Q96NY9 551 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 APOL4Q9BPW4 351 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 DPH1Q9BZG8 443 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 LRRN3Q9H3W5 708 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 LIN7CQ9NUP9 197 aaKnown RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 DNAJC11Q9NVH1 559 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 IMPAD1Q9NX62 359 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 U3KQV3 271 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 SHROOM3Q8TF72 1996 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 IGHV2-70DA0A0C4DH43 119 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 VSTM2BA6NLU5 285 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 SLC38A8A6NNN8 435 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 C15orf65H3BRN8 121 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 TLX2O43763 284 aaPredicted RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 SLC28A2O43868 658 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 NCR1O76036 304 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 GLP2RO95838 553 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 MTHFD2P13995 350 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 EGR1P18146 543 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 NELFEP18615 380 aaKnown RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 ATP4BP51164 291 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 KLF3P57682 345 aaPredicted RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 TAS2R50P59544 299 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 ACVR1Q04771 509 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 CSTF1Q05048 431 aaKnown RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 FASTKD1Q53R41 847 aaKnown RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 RAB6CQ53S08 254 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 QSOX2Q6ZRP7 698 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 GRINAQ7Z429 371 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 GDF7Q7Z4P5 450 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 TMEM173Q86WV6 379 aaPredicted RBP2.06□□□□□ -2.08
NEDD4-205ENST00000506154 NPAS3Q8IXF0 933 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 PGBD5Q8N414 524 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 CPXM2Q8N436 756 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 OR6K3Q8NGY3 331 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 OR4C6Q8NH72 309 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 CYGBQ8WWM9 190 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 C11orf40Q8WZ69 217 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 MOCOSQ96EN8 888 aa2.06□□□□□ -2.08
NEDD4-205ENST00000506154 ZNF285Q96NJ3 590 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms