RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 NPIPB9F8W1W9 429 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 SULT2B1O00204 365 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 CDC7O00311 574 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 CCL21O00585 134 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 ITGB1BP1O14713 200 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 LIN7AO14910 233 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 MBTPS2O43462 519 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 RAMP1O60894 148 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 MPDU1O75352 247 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 PLEKHA8P1O95397 391 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 LSM8O95777 96 aaKnown RBP3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 FADS2O95864 444 aaKnown RBP3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 IGHG4P01861 327 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 SERPINA5P05154 406 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 RHOCP08134 193 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 METP08581 1390 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 KRT7P08729 469 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 HOXD4P09016 255 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 WNT2P09544 360 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 DUX4L2P0CJ85 424 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 DUX4L3P0CJ86 424 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 DUX4L4P0CJ87 422 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 DUX4L5P0CJ88 424 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 DUX4L6P0CJ89 424 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 DUX4L7P0CJ90 424 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 BGNP21810 368 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 PSMB6P28072 239 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 PDHA2P29803 388 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 CALCRP30988 508 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 USP6P35125 1406 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 RFC3P40938 356 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 RGS19P49795 217 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 RND3P61587 244 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 ACTA2P62736 377 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 ACTG2P63267 376 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 ACTC1P68032 377 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 ACTA1P68133 377 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 SLC10A7Q0GE19 358 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 KIAA0141Q14154 515 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 MTF1Q14872 753 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 TRAM2Q15035 370 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 TNXAQ16473 311 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 KCTD19Q17RG1 926 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 NDUFAF6Q330K2 333 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 MUC21Q5SSG8 566 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 MROH7Q68CQ1 1323 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 DUX4L9Q6RFH8 374 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 FAM151BQ6UXP7 276 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 TMIGD1Q6UXZ0 262 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 Q6ZN92 141 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 Q6ZSR3 168 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 SSX6Q7RTT6 188 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 PAGE2Q7Z2X7 111 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 OR2W3Q7Z3T1 314 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 DCXRQ7Z4W1 244 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 MTERF4Q7Z6M4 381 aaKnown RBP3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 UNC93AQ86WB7 457 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 CCDC71Q8IV32 467 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 KIF2BQ8N4N8 673 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 NRACQ8N912 160 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 SUMF1Q8NBK3 374 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 ATP6V1C2Q8NEY4 427 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 OR5AP2Q8NGF4 316 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 OR10V1Q8NGI7 309 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 SPPL2AQ8TCT8 520 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 ZPLD1Q8TCW7 415 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 FAM122AQ96E09 287 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 CPB2Q96IY4 423 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 CELF6Q96J87 481 aaKnown RBP3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 ZNF521Q96K83 1311 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 ZFP3Q96NJ6 502 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 IL17FQ96PD4 163 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 OR8B4Q96RC9 309 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 RBBP8Q99708 897 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 ZNF251Q9BRH9 671 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 HES7Q9BYE0 225 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 SCAND2PQ9GZW5 306 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 DEFB129Q9H1M3 183 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 VCX3BQ9H321 246 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 C1orf198Q9H425 327 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 EBF2Q9HAK2 575 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 ACP6Q9NPH0 428 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 DEPPQ9NTK1 212 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 TMEM181Q9P2C4 612 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 B4GALT7Q9UBV7 327 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 DUX4Q9UBX2 424 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 DCDC2Q9UHG0 476 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 CLEC2DQ9UHP7 191 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 NXT1Q9UKK6 140 aaKnown RBP3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 SCML1Q9UN30 329 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 MRPS18CQ9Y3D5 142 aaKnown RBP3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 GOLT1BQ9Y3E0 138 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 HYOU1Q9Y4L1 999 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 PUS1Q9Y606 427 aaKnown RBP eCLIP3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 CSNK1G3Q9Y6M4 447 aa3.06□□□□□ -1.92
HMGB1P22-201ENST00000505315 CNTNAP1P78357 1384 aa3.05□□□□□ -1.92
HMGB1P22-201ENST00000505315 TEX48A0A1B0GUV7 120 aa3.05□□□□□ -1.92
HMGB1P22-201ENST00000505315 TSPAN11A1L157 253 aa3.05□□□□□ -1.92
HMGB1P22-201ENST00000505315 GOLGA8IPA6NC78 632 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms