RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 RASD1Q9Y272 281 aa11.42□□□□□ -0.58
DDX41-204ENST00000504807 ELOA3DA6NLF2 546 aaPredicted RBP11.41□□□□□ -0.58
DDX41-204ENST00000504807 C5orf58C9J3I9 102 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 H7C417 338 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 FBP2O00757 339 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 IGLV1-44P01699 117 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 H2AFXP16104 143 aaPredicted RBP11.41□□□□□ -0.58
DDX41-204ENST00000504807 SRD5A1P18405 259 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 GZMMP51124 257 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 CDH12P55289 794 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 PRPS1P60891 318 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 ARF1P84077 181 aaKnown RBP11.41□□□□□ -0.58
DDX41-204ENST00000504807 HGFACQ04756 655 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 OR1Q1Q15612 314 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 ETFDHQ16134 617 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 ZSWIM7Q19AV6 140 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 MSMPQ1L6U9 139 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 ELOA3BQ3SY89 546 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 ALG10BQ5I7T1 473 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 FBXL14Q8N1E6 418 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 ARIH2OSQ8N7S6 290 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 ELOA3Q8NG57 546 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 SLC38A4Q969I6 547 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 SLC41A3Q96GZ6 507 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 SORCS2Q96PQ0 1159 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 SLC38A2Q96QD8 506 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 ARHGDIGQ99819 225 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 EMC6Q9BV81 110 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 LINC00470Q9BZP3 86 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 RAD21L1Q9H4I0 556 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 PIF1Q9H611 641 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 GPR35Q9HC97 309 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 NPHS2Q9NP85 383 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 CRNNQ9UBG3 495 aaPredicted RBP11.41□□□□□ -0.58
DDX41-204ENST00000504807 LPAR3Q9UBY5 353 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.41□□□□□ -0.58
DDX41-204ENST00000504807 ALPK2Q86TB3 2170 aa11.41□□□□□ -0.58
DDX41-204ENST00000504807 TRAV36DV7A0A075B6V5 113 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 A0A087WUJ7 227 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 ARPC4-TTLL3A0A0A6YYG9 625 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 A0A0G2JK05 382 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 TMEM247A6NEH6 219 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 ZNF587BE7ETH6 402 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 EDF1O60869 148 aaKnown RBP11.4□□□□□ -0.58
DDX41-204ENST00000504807 VAMP5O95183 116 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 CD247P20963 164 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 NUDT6P53370 316 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 NAAAQ02083 359 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 SF3A3Q12874 501 aaKnown RBP eCLIP11.4□□□□□ -0.585e-6■■□□□ 14.3
DDX41-204ENST00000504807 ADIPOQQ15848 244 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 CEACAM16Q2WEN9 425 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 FAM69AQ5T7M9 428 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 CGB2Q6NT52 195 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 ZNF544Q6NX49 715 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 ANKRD16Q6P6B7 361 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 LINC00114Q6XXX2 140 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 IL17RELQ6ZVW7 336 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 SSX8Q7RTT4 187 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 DHDDSQ86SQ9 333 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 ANKS4BQ8N8V4 417 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 C10orf105Q8TEF2 133 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 FBXO17Q96EF6 278 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 ANKRD27Q96NW4 1050 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 OXGR1Q96P68 337 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 C12orf10Q9HB07 376 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 INTS9Q9NV88 658 aaKnown RBP11.4□□□□□ -0.58
DDX41-204ENST00000504807 FAIMQ9NVQ4 179 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 TMEM45AQ9NWC5 275 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 MED29Q9NX70 200 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 ZNF224Q9NZL3 707 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 RCE1Q9Y256 329 aa11.4□□□□□ -0.58
DDX41-204ENST00000504807 RPL36A-HNRNPH2H7BZ11 118 aa11.39□□□□□ -0.59
DDX41-204ENST00000504807 FXYD1O00168 92 aa11.39□□□□□ -0.59
DDX41-204ENST00000504807 KRT33AO76009 404 aa11.39□□□□□ -0.59
DDX41-204ENST00000504807 FUT4P22083 530 aa11.39□□□□□ -0.59
DDX41-204ENST00000504807 APOBEC3AP31941 199 aaPredicted RBP11.39□□□□□ -0.59
DDX41-204ENST00000504807 RGS8P57771 180 aaPredicted RBP11.39□□□□□ -0.59
DDX41-204ENST00000504807 TGFBR3Q03167 851 aa11.39□□□□□ -0.59
DDX41-204ENST00000504807 NRF1Q16656 503 aa11.39□□□□□ -0.59
DDX41-204ENST00000504807 LIPNQ5VXI9 398 aa11.39□□□□□ -0.59
DDX41-204ENST00000504807 CARD17Q5XLA6 110 aa11.39□□□□□ -0.59
DDX41-204ENST00000504807 ULK3Q6PHR2 472 aa11.39□□□□□ -0.59
DDX41-204ENST00000504807 H1FNTQ75WM6 255 aaPredicted RBP11.39□□□□□ -0.59
DDX41-204ENST00000504807 NET1Q7Z628 596 aaPredicted RBP11.39□□□□□ -0.59
DDX41-204ENST00000504807 ARMC8Q8IUR7 673 aa11.39□□□□□ -0.59
DDX41-204ENST00000504807 DPP10Q8N608 796 aa11.39□□□□□ -0.59
DDX41-204ENST00000504807 HIPK4Q8NE63 616 aa11.39□□□□□ -0.59
DDX41-204ENST00000504807 OR6T1Q8NGN1 323 aa11.39□□□□□ -0.59
DDX41-204ENST00000504807 TAMM41Q96BW9 452 aa11.39□□□□□ -0.59
DDX41-204ENST00000504807 MAGEB18Q96M61 343 aa11.39□□□□□ -0.59
DDX41-204ENST00000504807 ZNF75AQ96N20 296 aa11.39□□□□□ -0.59
DDX41-204ENST00000504807 CGREF1Q99674 301 aa11.39□□□□□ -0.59
DDX41-204ENST00000504807 KAT8Q9H7Z6 458 aaKnown RBP11.39□□□□□ -0.59
DDX41-204ENST00000504807 BARX1Q9HBU1 254 aaPredicted RBP11.39□□□□□ -0.59
DDX41-204ENST00000504807 CRLF2Q9HC73 371 aa11.39□□□□□ -0.59
DDX41-204ENST00000504807 RPS6KB2Q9UBS0 482 aa11.39□□□□□ -0.59
DDX41-204ENST00000504807 TESQ9UGI8 421 aaKnown RBP11.39□□□□□ -0.59
DDX41-204ENST00000504807 PRDM4Q9UKN5 801 aa11.39□□□□□ -0.59
DDX41-204ENST00000504807 LOC102725191A0A1B0GVB3 256 aa11.38□□□□□ -0.59
DDX41-204ENST00000504807 VWC2LB2RUY7 222 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms