RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 ISOC2Q96AB3 205 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 SGK494Q96LW2 274 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 TMEM39BQ9GZU3 492 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.8□□□□□ -1.48
CLCN3-204ENST00000504131 PLEKHJ1Q9NW61 149 aa5.8□□□□□ -1.48
CLCN3-204ENST00000504131 S1PR1P21453 382 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 RGRP47804 291 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 LIMS1P48059 325 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 COL9A3Q14050 684 aaPredicted RBP5.79□□□□□ -1.48
CLCN3-204ENST00000504131 XKR7Q5GH72 579 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 SYT6Q5T7P8 510 aaPredicted RBP5.79□□□□□ -1.48
CLCN3-204ENST00000504131 GRASPQ7Z6J2 395 aaPredicted RBP5.79□□□□□ -1.48
CLCN3-204ENST00000504131 TMEM135Q86UB9 458 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 DBF4BQ8NFT6 615 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 OR52R1Q8NGF1 315 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 OR5W2Q8NH69 310 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 OSTF1Q92882 214 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 C1GALT1C1Q96EU7 318 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 GPR174Q9BXC1 333 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 METTL17Q9H7H0 456 aaPredicted RBP5.79□□□□□ -1.48
CLCN3-204ENST00000504131 CGGBP1Q9UFW8 167 aaPredicted RBP5.79□□□□□ -1.48
CLCN3-204ENST00000504131 FZD4Q9ULV1 537 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 N4BP2Q86UW6 1770 aaPredicted RBP5.79□□□□□ -1.48
CLCN3-204ENST00000504131 ADAMTS7Q9UKP4 1686 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 C1QTNF3-AMACRE9PGA6 284 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 RNF225M0QZC1 329 aaPredicted RBP5.79□□□□□ -1.48
CLCN3-204ENST00000504131 PRKAB2O43741 272 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 B4GALT3O60512 393 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 SC5DO75845 299 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 LIPCP11150 499 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 ADCYAP1R1P41586 468 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 PIGFQ07326 219 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 NOGQ13253 232 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 DUSP28Q4G0W2 176 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 C1orf53Q5VUE5 145 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 SLC8B1Q6J4K2 584 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 CHADLQ6NUI6 762 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.79□□□□□ -1.482e-8■■□□□ 13
CLCN3-204ENST00000504131 CMTM4Q8IZR5 234 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 MRPL43Q8N983 215 aaKnown RBP5.79□□□□□ -1.48
CLCN3-204ENST00000504131 SLC38A9Q8NBW4 561 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 FAM110BQ8TC76 370 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 COPS8Q99627 209 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 H2AFJQ9BTM1 129 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 CHRDL1Q9BU40 450 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 C1orf198Q9H425 327 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 SLC2A6Q9UGQ3 507 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 ATG4BQ9Y4P1 393 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 RIIAD1A6NNX1 92 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 M0QZ24 198 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 HRO43593 1189 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 GDF9O60383 454 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 HPP00738 406 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 HPRP00739 348 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 ZNF44P15621 663 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 ADRA2CP18825 462 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 RAB5AP20339 215 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 CEACAM8P31997 349 aaPredicted RBP5.79□□□□□ -1.48
CLCN3-204ENST00000504131 DLK1P80370 383 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 RBPJQ06330 500 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 HERPUD1Q15011 391 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 C9orf135Q5VTT2 229 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 DHRS7BQ6IAN0 325 aaPredicted RBP5.79□□□□□ -1.48
CLCN3-204ENST00000504131 TMUB2Q71RG4 321 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 OR56B4Q8NH76 319 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 SLC5A5Q92911 643 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 TMEM159Q96B96 161 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 IL4I1Q96RQ9 567 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 ZSCAN10Q96SZ4 725 aaPredicted RBP5.79□□□□□ -1.48
CLCN3-204ENST00000504131 NIPSNAP1Q9BPW8 284 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 TMEM43Q9BTV4 400 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 ZBTB20Q9HC78 741 aaPredicted RBP5.79□□□□□ -1.48
CLCN3-204ENST00000504131 SSU72Q9NP77 194 aaKnown RBP5.79□□□□□ -1.48
CLCN3-204ENST00000504131 ELOVL2Q9NXB9 296 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 ONECUT1Q9UBC0 465 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 ZFP30Q9Y2G7 519 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 ZNF281Q9Y2X9 895 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 NOP16Q9Y3C1 178 aaKnown RBP5.79□□□□□ -1.48
CLCN3-204ENST00000504131 TRPM3Q9HCF6 1732 aaPredicted RBP5.79□□□□□ -1.48
CLCN3-204ENST00000504131 SSU72P8A0A1W2PR75 194 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 CREBL2O60519 120 aaPredicted RBP5.79□□□□□ -1.48
CLCN3-204ENST00000504131 CTXN2P0C2S0 81 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 HOXD8P13378 290 aaPredicted RBP5.79□□□□□ -1.48
CLCN3-204ENST00000504131 TPT1P13693 172 aaKnown RBP5.79□□□□□ -1.48
CLCN3-204ENST00000504131 AKR1C4P17516 323 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 IMPA1P29218 277 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 CCKARP32238 428 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 RPL21P46778 160 aaKnown RBP5.79□□□□□ -1.48
CLCN3-204ENST00000504131 LHX1P48742 406 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 DGKEP52429 567 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 SEC61GP60059 68 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 GABARAPL2P60520 117 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 ERVFC1-1P60608 527 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 IRF8Q02556 426 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 PTP4A2Q12974 167 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 LAPTM4AQ15012 233 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 ISXQ2M1V0 245 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 NPSR1Q6W5P4 371 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 TNS4Q8IZW8 715 aa5.79□□□□□ -1.48
CLCN3-204ENST00000504131 OR52N4Q8NGI2 321 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms