RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 SELPLGQ14242 412 aa16.95■□□□□ 0.3
UBE2D3-215ENST00000503418 RETREG3Q86VR2 466 aa16.95■□□□□ 0.3
UBE2D3-215ENST00000503418 PTOV1Q86YD1 416 aa16.95■□□□□ 0.3
UBE2D3-215ENST00000503418 UEVLDQ8IX04 471 aa16.95■□□□□ 0.3
UBE2D3-215ENST00000503418 C10orf53Q8N6V4 93 aa16.95■□□□□ 0.3
UBE2D3-215ENST00000503418 STON2Q8WXE9 905 aa16.95■□□□□ 0.3
UBE2D3-215ENST00000503418 FBXO17Q96EF6 278 aa16.95■□□□□ 0.3
UBE2D3-215ENST00000503418 ANKRD27Q96NW4 1050 aa16.95■□□□□ 0.3
UBE2D3-215ENST00000503418 CGREF1Q99674 301 aa16.95■□□□□ 0.3
UBE2D3-215ENST00000503418 ASPNQ9BXN1 380 aa16.95■□□□□ 0.3
UBE2D3-215ENST00000503418 NELFAQ9H3P2 528 aa16.95■□□□□ 0.3
UBE2D3-215ENST00000503418 ZNF385DQ9H6B1 395 aa16.95■□□□□ 0.3
UBE2D3-215ENST00000503418 VIPAS39Q9H9C1 493 aa16.95■□□□□ 0.3
UBE2D3-215ENST00000503418 PMF1-BGLAPU3KQ54 211 aa16.95■□□□□ 0.3
UBE2D3-215ENST00000503418 CHD3Q12873 2000 aaKnown RBP16.95■□□□□ 0.3
UBE2D3-215ENST00000503418 ARPC4-TTLL3A0A0A6YYG9 625 aa16.94■□□□□ 0.3
UBE2D3-215ENST00000503418 M0R3H8 397 aa16.94■□□□□ 0.3
UBE2D3-215ENST00000503418 TPST2O60704 377 aa16.94■□□□□ 0.3
UBE2D3-215ENST00000503418 EDF1O60869 148 aaKnown RBP16.94■□□□□ 0.3
UBE2D3-215ENST00000503418 CRYAAP02489 173 aa16.94■□□□□ 0.3
UBE2D3-215ENST00000503418 ARF1P84077 181 aaKnown RBP16.94■□□□□ 0.3
UBE2D3-215ENST00000503418 MFSD13AQ14CX5 517 aa16.94■□□□□ 0.3
UBE2D3-215ENST00000503418 CEACAM16Q2WEN9 425 aa16.94■□□□□ 0.3
UBE2D3-215ENST00000503418 CARD17Q5XLA6 110 aa16.94■□□□□ 0.3
UBE2D3-215ENST00000503418 DPP10Q8N608 796 aa16.94■□□□□ 0.3
UBE2D3-215ENST00000503418 ZNF525Q8N782 197 aa16.94■□□□□ 0.3
UBE2D3-215ENST00000503418 PIK3C3Q8NEB9 887 aa16.94■□□□□ 0.3
UBE2D3-215ENST00000503418 MAGEE2Q8TD90 523 aaPredicted RBP16.94■□□□□ 0.3
UBE2D3-215ENST00000503418 ZNF317Q96PQ6 595 aaPredicted RBP16.94■□□□□ 0.3
UBE2D3-215ENST00000503418 OR2M2Q96R28 347 aa16.94■□□□□ 0.3
UBE2D3-215ENST00000503418 KATNB1Q9BVA0 655 aa16.94■□□□□ 0.3
UBE2D3-215ENST00000503418 EVA1AQ9H8M9 152 aa16.94■□□□□ 0.3
UBE2D3-215ENST00000503418 GPR35Q9HC97 309 aa16.94■□□□□ 0.3
UBE2D3-215ENST00000503418 CORINQ9Y5Q5 1042 aa16.94■□□□□ 0.3
UBE2D3-215ENST00000503418 JMJD1CQ15652 2540 aa16.94■□□□□ 0.3
UBE2D3-215ENST00000503418 ARFGEF3Q5TH69 2177 aa16.94■□□□□ 0.3
UBE2D3-215ENST00000503418 RPL36A-HNRNPH2H7BZ11 118 aa16.93■□□□□ 0.3
UBE2D3-215ENST00000503418 TRAF3IP2O43734 574 aaPredicted RBP16.93■□□□□ 0.3
UBE2D3-215ENST00000503418 BGLAPP02818 100 aa16.93■□□□□ 0.3
UBE2D3-215ENST00000503418 CECR9P0C854 216 aa16.93■□□□□ 0.3
UBE2D3-215ENST00000503418 PAX7P23759 505 aa16.93■□□□□ 0.3
UBE2D3-215ENST00000503418 CDH12P55289 794 aa16.93■□□□□ 0.3
UBE2D3-215ENST00000503418 PCBP3P57721 371 aaKnown RBP16.93■□□□□ 0.3
UBE2D3-215ENST00000503418 DSCR9P59020 149 aa16.93■□□□□ 0.3
UBE2D3-215ENST00000503418 RBBP4Q09028 425 aa16.93■□□□□ 0.3
UBE2D3-215ENST00000503418 ADPRHL1Q8NDY3 354 aa16.93■□□□□ 0.3
UBE2D3-215ENST00000503418 OR10H5Q8NGA6 315 aa16.93■□□□□ 0.3
UBE2D3-215ENST00000503418 MOGAT1Q96PD6 335 aa16.93■□□□□ 0.3
UBE2D3-215ENST00000503418 MCHR1Q99705 422 aa16.93■□□□□ 0.3
UBE2D3-215ENST00000503418 CRLF2Q9HC73 371 aa16.93■□□□□ 0.3
UBE2D3-215ENST00000503418 KIAA1324LA8MWY0 1029 aaPredicted RBP16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 LRRN3E7EW58 273 aa16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 MS4A18H0YCH9 400 aa16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 M0QX08 132 aa16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 M0R3G1 203 aa16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 CD5LO43866 347 aa16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 SEC14L2O76054 403 aa16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 HPRP00739 348 aa16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 HLA-DOBP13765 273 aa16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 H2AFXP16104 143 aaPredicted RBP16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 CAPZA2P47755 286 aa16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 NAAAQ02083 359 aa16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 POU3F1Q03052 451 aaPredicted RBP16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 PMS2P3Q13401 168 aa16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 DUSP7Q16829 419 aa16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 MS4A18Q3C1V0 323 aa16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 SWT1Q5T5J6 900 aaKnown RBP16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 VHLLQ6RSH7 139 aa16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 TMEM123Q8N131 208 aa16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 ANKK1Q8NFD2 765 aa16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 OR6S1Q8NH40 331 aa16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 FAM168AQ92567 244 aa16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 ZNF837Q96EG3 531 aaPredicted RBP16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 ARHGDIGQ99819 225 aa16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 SIKE1Q9BRV8 207 aa16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 EMC6Q9BV81 110 aa16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 SEC61A2Q9H9S3 476 aa16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 YAE1D1Q9NRH1 226 aa16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 CA10Q9NS85 328 aa16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 CRNNQ9UBG3 495 aaPredicted RBP16.92■□□□□ 0.3
UBE2D3-215ENST00000503418 SONP18583 2426 aaKnown RBP16.91■□□□□ 0.3
UBE2D3-215ENST00000503418 LOC102725191A0A1B0GVB3 256 aa16.91■□□□□ 0.3
UBE2D3-215ENST00000503418 CPSF4LA6NMK7 179 aaKnown RBP16.91■□□□□ 0.3
UBE2D3-215ENST00000503418 GPRIN2O60269 458 aa16.91■□□□□ 0.3
UBE2D3-215ENST00000503418 CRLF1O75462 422 aa16.91■□□□□ 0.3
UBE2D3-215ENST00000503418 SERPINI2O75830 405 aa16.91■□□□□ 0.3
UBE2D3-215ENST00000503418 LY6HO94772 140 aa16.91■□□□□ 0.3
UBE2D3-215ENST00000503418 HOXB1P14653 301 aaPredicted RBP16.91■□□□□ 0.3
UBE2D3-215ENST00000503418 EFNA4P52798 201 aa16.91■□□□□ 0.3
UBE2D3-215ENST00000503418 SNRPD2P62316 118 aaKnown RBP16.91■□□□□ 0.3
UBE2D3-215ENST00000503418 PUDPQ08623 228 aa16.91■□□□□ 0.3
UBE2D3-215ENST00000503418 NPRL3Q12980 569 aa16.91■□□□□ 0.3
UBE2D3-215ENST00000503418 PHYHD1Q5SRE7 291 aa16.91■□□□□ 0.3
UBE2D3-215ENST00000503418 SCAIQ8N9R8 606 aa16.91■□□□□ 0.3
UBE2D3-215ENST00000503418 GPR32P1Q8NGA4 272 aa16.91■□□□□ 0.3
UBE2D3-215ENST00000503418 OR6T1Q8NGN1 323 aa16.91■□□□□ 0.3
UBE2D3-215ENST00000503418 OR10A6Q8NH74 314 aa16.91■□□□□ 0.3
UBE2D3-215ENST00000503418 VANGL1Q8TAA9 524 aaPredicted RBP16.91■□□□□ 0.3
UBE2D3-215ENST00000503418 SLC26A7Q8TE54 656 aa16.91■□□□□ 0.3
UBE2D3-215ENST00000503418 TSPEARQ8WU66 669 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms